-
1
-
-
0034686018
-
Binding of alkylurea inhibitors to epoxide hydrolase implicates active site tyrosines in substrate activation
-
Argiriadi MA, Morisseau C, Goodrow MH, Dowdy DL, Hammock BD, Christianson DW (2000) Binding of alkylurea inhibitors to epoxide hydrolase implicates active site tyrosines in substrate activation. J Biol Chem 275:15,265-15,270
-
(2000)
J Biol Chem
, vol.275
-
-
Argiriadi, M.A.1
Morisseau, C.2
Goodrow, M.H.3
Dowdy, D.L.4
Hammock, B.D.5
Christianson, D.W.6
-
2
-
-
0037248869
-
PRINTS and its automatic supplement, pre-PRINTS
-
Attwood TK, Bradley P, Flower DR, Gaulton A, Maudling N, Mitchell AL, Moulton G, Nordle A, Paine K, Taylor P, Uddin A, Zygouri C (2003) PRINTS and its automatic supplement, pre-PRINTS. Nucleic Acids Res 31:400-402
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 400-402
-
-
Attwood, T.K.1
Bradley, P.2
Flower, D.R.3
Gaulton, A.4
Maudling, N.5
Mitchell, A.L.6
Moulton, G.7
Nordle, A.8
Paine, K.9
Taylor, P.10
Uddin, A.11
Zygouri, C.12
-
3
-
-
2542616771
-
Sequence and structure of epoxide hydrolases: A systematic analysis
-
Barth S, Fischer M, Schmid RD, Pleiss J (2004) Sequence and structure of epoxide hydrolases: A systematic analysis. Proteins 55:846-855
-
(2004)
Proteins
, vol.55
, pp. 846-855
-
-
Barth, S.1
Fischer, M.2
Schmid, R.D.3
Pleiss, J.4
-
4
-
-
2242469357
-
Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis
-
Boháč M, Nagata Y, Prokop Z, Prokop M, Monincová M, Tsuda M, Koča J, Damborský J (2002) Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis. Biochemistry 41:14,272-14,280
-
(2002)
Biochemistry
, vol.41
-
-
Boháč, M.1
Nagata, Y.2
Prokop, Z.3
Prokop, M.4
Monincová, M.5
Tsuda, M.6
Koča, J.7
Damborský, J.8
-
5
-
-
0002329088
-
Oxygen-flavin chemistry
-
Bruice TC (1984) Oxygen-flavin chemistry. Isr J Chem 24:54-61
-
(1984)
Isr J Chem
, vol.24
, pp. 54-61
-
-
Bruice, T.C.1
-
6
-
-
0001293381
-
Structure of naturally occurring antagonist of dihydrostreptomycin
-
Cornforth JW, James AT (1956) Structure of naturally occurring antagonist of dihydrostreptomycin. Biochem J 63:124-130
-
(1956)
Biochem J
, vol.63
, pp. 124-130
-
-
Cornforth, J.W.1
James, A.T.2
-
8
-
-
0344822639
-
Analysis of the reaction mechanism and substrate specificity of haloalkane dehalogenases by sequential and structural comparisons
-
Damborský J, Koča J (1999) Analysis of the reaction mechanism and substrate specificity of haloalkane dehalogenases by sequential and structural comparisons. Protein Eng 12:989-998
-
(1999)
Protein Eng
, vol.12
, pp. 989-998
-
-
Damborský, J.1
Koča, J.2
-
9
-
-
0017841893
-
Chinolyliden-Derivate
-
Weinheim
-
Eiden D, Wendt R, Fenner H (1978) Chinolyliden-Derivate. Arch Pharm (Weinheim) 311:561-568
-
(1978)
Arch Pharm
, vol.311
, pp. 561-568
-
-
Eiden, D.1
Wendt, R.2
Fenner, H.3
-
10
-
-
84971101852
-
Synthesis of an arylhydroxytetronimide and of 3-hydroxy-(1H)-quinolone derivatives
-
Evans DJ, Eastwood FW (1974) Synthesis of an arylhydroxytetronimide and of 3-hydroxy-(1H)-quinolone derivatives. Aust J Chem 27:537-542
-
(1974)
Aust J Chem
, vol.27
, pp. 537-542
-
-
Evans, D.J.1
Eastwood, F.W.2
-
11
-
-
0037210467
-
Oxygenases without requirement for cofactors or metal ions
-
Fetzner S (2002) Oxygenases without requirement for cofactors or metal ions. Appl Microbiol Biotechnol 60:243-257
-
(2002)
Appl Microbiol Biotechnol
, vol.60
, pp. 243-257
-
-
Fetzner, S.1
-
12
-
-
0344172698
-
Bacterial 2,4-dioxygenases: New members of the α/β hydrolase-fold superfamily of enzymes functionally related to serine hydrolases
-
Fischer F, Künne S, Fetzner S (1999) Bacterial 2,4-dioxygenases: new members of the α/β hydrolase-fold superfamily of enzymes functionally related to serine hydrolases. J Bacteriol 181:5725-5733
-
(1999)
J Bacteriol
, vol.181
, pp. 5725-5733
-
-
Fischer, F.1
Künne, S.2
Fetzner, S.3
-
13
-
-
8544222809
-
Dioxygenases without requirement for cofactors, and their chemical model reaction: Compulsory order ternary complex mechanism of 1H-3-hydroxy-4- oxoquinaldine 2,4-dioxygenase involving general base catalysis by histidine 251 and single electron oxidation of the substrate dianion
-
Frerichs-Deeken U, Ranguelova K, Kappl R, Hüttermann J, Fetzner S (2004) Dioxygenases without requirement for cofactors, and their chemical model reaction: Compulsory order ternary complex mechanism of 1H-3-hydroxy-4- oxoquinaldine 2,4-dioxygenase involving general base catalysis by histidine 251 and single electron oxidation of the substrate dianion. Biochemistry 43:14,485-14,499
-
(2004)
Biochemistry
, vol.43
-
-
Frerichs-Deeken, U.1
Ranguelova, K.2
Kappl, R.3
Hüttermann, J.4
Fetzner, S.5
-
15
-
-
0028118434
-
Protein family classification based on searching a database of blocks
-
Henikoff S, Henikoff JG (1994) Protein family classification based on searching a database of blocks. Genomics 19:97-107
-
(1994)
Genomics
, vol.19
, pp. 97-107
-
-
Henikoff, S.1
Henikoff, J.G.2
-
16
-
-
0034285515
-
Alpha/beta-hydrolase fold enzymes: Structures, functions and mechanisms
-
Holmquist M (2000) Alpha/beta-hydrolase fold enzymes: structures, functions and mechanisms. Curr Protein Pept Sci 1:209-235
-
(2000)
Curr Protein Pept Sci
, vol.1
, pp. 209-235
-
-
Holmquist, M.1
-
17
-
-
0003728297
-
-
Norwich, UK: The John Innes Foundation
-
Hopwood DA, Bibb MJ, Chater KF, Kieser T, Burton CJ, Kieser HM, Lydiate DJ, Smith CP, Ward JM, Schrempf H (1985) Genetic manipulation of Streptomyces: A laboratory manual. Norwich, UK: The John Innes Foundation
-
(1985)
Genetic Manipulation of Streptomyces: A Laboratory Manual
-
-
Hopwood, D.A.1
Bibb, M.J.2
Chater, K.F.3
Kieser, T.4
Burton, C.J.5
Kieser, H.M.6
Lydiate, D.J.7
Smith, C.P.8
Ward, J.M.9
Schrempf, H.10
-
18
-
-
0346494961
-
ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins
-
Hotelier T, Renault L, Cousin X, Negre V, Marchot P, Chatonnet A (2004) ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins. Nucleic Acids Res 32:D145-D147
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Hotelier, T.1
Renault, L.2
Cousin, X.3
Negre, V.4
Marchot, P.5
Chatonnet, A.6
-
19
-
-
85007734167
-
Transformation of Pseudomonas putida by electroporation
-
Iwasaki K, Uchiyama H, Yagi O, Kurabayashi T, Ishizuku K, Takamury Y (1994) Transformation of Pseudomonas putida by electroporation. Biosci Biotech Biochem 58:851-854
-
(1994)
Biosci Biotech Biochem
, vol.58
, pp. 851-854
-
-
Iwasaki, K.1
Uchiyama, H.2
Yagi, O.3
Kurabayashi, T.4
Ishizuku, K.5
Takamury, Y.6
-
21
-
-
0032544185
-
Spectroscopic characterization of intermediates in the urate oxidase reaction
-
Kahn K, Tipton PA (1998) Spectroscopic characterization of intermediates in the urate oxidase reaction. Biochemistry 37:11,651-11,659
-
(1998)
Biochemistry
, vol.37
-
-
Kahn, K.1
Tipton, P.A.2
-
22
-
-
0028942983
-
Replacement of tryptophan residues in haloalkane dehalogenase reduces halide binding and catalytic activity
-
Kennes C, Pries F, Krooshof GH, Bokma E, Kingma J, Janssen DB (1995) Replacement of tryptophan residues in haloalkane dehalogenase reduces halide binding and catalytic activity. Eur J Biochem 228:403-407
-
(1995)
Eur J Biochem
, vol.228
, pp. 403-407
-
-
Kennes, C.1
Pries, F.2
Krooshof, G.H.3
Bokma, E.4
Kingma, J.5
Janssen, D.B.6
-
23
-
-
0034840430
-
Life as aerobes: Are there simple rules for activation of dioxygen by enzymes?
-
Klinman JP (2001) Life as aerobes: Are there simple rules for activation of dioxygen by enzymes? J Biol Inorg Chem 6:1-13
-
(2001)
J Biol Inorg Chem
, vol.6
, pp. 1-13
-
-
Klinman, J.P.1
-
24
-
-
0001062635
-
Kinetics of carboxypeptidase action. Effect of various extrinsic factors on kinetic parameters
-
Lumry R, Smith EL, Glantz RR (1951) Kinetics of carboxypeptidase action. Effect of various extrinsic factors on kinetic parameters. J Am Chem Soc 73:4330-4340
-
(1951)
J Am Chem Soc
, vol.73
, pp. 4330-4340
-
-
Lumry, R.1
Smith, E.L.2
Glantz, R.R.3
-
25
-
-
0034700262
-
Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26
-
Marek J, Vévodová J, Smatanová IK, Nagata Y, Svensson LA, Newman J, Takagi M, Damborský J (2000) Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26. Biochemistry 39:14,082-14,086
-
(2000)
Biochemistry
, vol.39
-
-
Marek, J.1
Vévodová, J.2
Smatanová, I.K.3
Nagata, Y.4
Svensson, L.A.5
Newman, J.6
Takagi, M.7
Damborský, J.8
-
26
-
-
0032784276
-
α/β Hydrolase fold enzymes: The family keeps growing
-
Nardini M, Dijkstra BW (1999) α/β Hydrolase fold enzymes: The family keeps growing. Curr Opin Struct Biol 9:732-737
-
(1999)
Curr Opin Struct Biol
, vol.9
, pp. 732-737
-
-
Nardini, M.1
Dijkstra, B.W.2
-
27
-
-
0942301386
-
Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 Å resolution: Dynamics of catalytic residues
-
Oakley AJ, Klvana M, Otyepka M, Nagata Y, Wilce MCW, Damborský J (2004) Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 Å resolution: Dynamics of catalytic residues. Biochemistry 43:870-878
-
(2004)
Biochemistry
, vol.43
, pp. 870-878
-
-
Oakley, A.J.1
Klvana, M.2
Otyepka, M.3
Nagata, Y.4
Wilce, M.C.W.5
Damborský, J.6
-
28
-
-
0026540411
-
The α/β hydrolase fold
-
Ollis DL, Cheah E, Cygler M, Dijkstra BW, Frolow F, Franken SM, Harel M, Remington SJ, Silman I, Schrag J, Sussman JL, Verschueren KHG, Goldman A (1992) The α/β hydrolase fold. Protein Eng 5:197-211
-
(1992)
Protein Eng
, vol.5
, pp. 197-211
-
-
Ollis, D.L.1
Cheah, E.2
Cygler, M.3
Dijkstra, B.W.4
Frolow, F.5
Franken, S.M.6
Harel, M.7
Remington, S.J.8
Silman, I.9
Schrag, J.10
Sussman, J.L.11
Verschueren, K.H.G.12
Goldman, A.13
-
29
-
-
14044270156
-
Identification of large linear plasmids in Arthrobacter spp. coding for the degradation of quinaldine to anthranilate
-
Overhage J, Sielker S, Homburg S, Parschat K, Fetzner S (2005) Identification of large linear plasmids in Arthrobacter spp. coding for the degradation of quinaldine to anthranilate. Microbiology 151:491-500
-
(2005)
Microbiology
, vol.151
, pp. 491-500
-
-
Overhage, J.1
Sielker, S.2
Homburg, S.3
Parschat, K.4
Fetzner, S.5
-
30
-
-
0002458654
-
Oxygen activation by flavins and pterins
-
Valentine JS, Foote CS, Greenberg A, Liebman JF (eds) London: Blackie Academic and Professional (Chapman & Hall)
-
Palfey BA, Ballou DP, Massey V (1995) Oxygen activation by flavins and pterins. In: Valentine JS, Foote CS, Greenberg A, Liebman JF (eds) Active oxygen in biochemistry. London: Blackie Academic and Professional (Chapman & Hall), pp 37-83
-
(1995)
Active Oxygen in Biochemistry
, pp. 37-83
-
-
Palfey, B.A.1
Ballou, D.P.2
Massey, V.3
-
31
-
-
0345624451
-
Mutation of tyrosine residues involved in the alkylation half reaction of epoxide hydrolase from Agrobacterium radiobacter AD1 results in improved enantioselectivity
-
Rink R, Lutje Spelberg JH, Pieters RJ, Kingma J, Nardini M, Kellog RM, Dijkstra BW, Janssen DB (1999) Mutation of tyrosine residues involved in the alkylation half reaction of epoxide hydrolase from Agrobacterium radiobacter AD1 results in improved enantioselectivity. J Am Chem Soc 121:7417-7418
-
(1999)
J Am Chem Soc
, vol.121
, pp. 7417-7418
-
-
Rink, R.1
Lutje Spelberg, J.H.2
Pieters, R.J.3
Kingma, J.4
Nardini, M.5
Kellog, R.M.6
Dijkstra, B.W.7
Janssen, D.B.8
-
32
-
-
0034625104
-
Tyrosine residues serve as proton donor in the catalytic mechanism of epoxide hydrolase from Agrobacterium radiobacter
-
Rink R, Kingma J, Lutje Spelberg JH, Janssen DB (2000) Tyrosine residues serve as proton donor in the catalytic mechanism of epoxide hydrolase from Agrobacterium radiobacter. Biochemistry 39:5600-5613
-
(2000)
Biochemistry
, vol.39
, pp. 5600-5613
-
-
Rink, R.1
Kingma, J.2
Lutje Spelberg, J.H.3
Janssen, D.B.4
-
35
-
-
0034669659
-
Evidence for urate hydroperoxide as an intermediate in the urate oxidase reaction
-
Sarma AD, Tipton PA (2000) Evidence for urate hydroperoxide as an intermediate in the urate oxidase reaction. J Am Chem Soc 122:11, 252-11,253
-
(2000)
J Am Chem Soc
, vol.122
-
-
Sarma, A.D.1
Tipton, P.A.2
-
36
-
-
8544246692
-
Kinetic studies of urate oxidase
-
Frey PA, Northrop DB (eds) Amsterdam: IOS Press
-
Tipton PA (1999) Kinetic studies of urate oxidase. In: Frey PA, Northrop DB (eds) Enzymatic mechanisms. Amsterdam: IOS Press, pp 278-287
-
(1999)
Enzymatic Mechanisms
, pp. 278-287
-
-
Tipton, P.A.1
-
37
-
-
0027337615
-
Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase
-
Verschueren KHG, Seljée F, Rozeboom HJ, Kalk KH, Dijkstra BW (1993) Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase. Nature 363:693-698
-
(1993)
Nature
, vol.363
, pp. 693-698
-
-
Verschueren, K.H.G.1
Seljée, F.2
Rozeboom, H.J.3
Kalk, K.H.4
Dijkstra, B.W.5
-
38
-
-
0027280086
-
Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications for the reaction mechanism
-
Verschueren KHG, Franken SM, Rozeboom HJ, Kalk KH, Dijkstra BW (1993) Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications for the reaction mechanism. J Mol Biol 232:856-872
-
(1993)
J Mol Biol
, vol.232
, pp. 856-872
-
-
Verschueren, K.H.G.1
Franken, S.M.2
Rozeboom, H.J.3
Kalk, K.H.4
Dijkstra, B.W.5
-
40
-
-
0034725581
-
Biochemical evidence for the involvement of tyrosine in epoxide activation during the catalytic cycle of epoxide hydrolase
-
Yamada T, Morisseau C, Maxwell JE, Argiriadi MA, Christianson DW, Hammock BD (2000) Biochemical evidence for the involvement of tyrosine in epoxide activation during the catalytic cycle of epoxide hydrolase. J Biol Chem 275:23,082-23,088
-
(2000)
J Biol Chem
, vol.275
-
-
Yamada, T.1
Morisseau, C.2
Maxwell, J.E.3
Argiriadi, M.A.4
Christianson, D.W.5
Hammock, B.D.6
-
41
-
-
0029917011
-
Linearisation of the Bradford protein assay increases its sensitivity: Theoretical and experimental studies
-
Zor T, Selinger Z (1996) Linearisation of the Bradford protein assay increases its sensitivity: Theoretical and experimental studies. Anal Biochem 236:302-308
-
(1996)
Anal Biochem
, vol.236
, pp. 302-308
-
-
Zor, T.1
Selinger, Z.2
|