-
1
-
-
0023731837
-
Cascade regulation of nif gene expression in Rhizobium meliloti
-
David, M., Daveran, M.-L., Baut, J., Dedieu, A., Domergue, O., Ghai, J., Hertig, C., Boistard, P., and Kahn, D. (1988) Cascade regulation of nif gene expression in Rhizobium meliloti, Cell 54, 671-683.
-
(1988)
Cell
, vol.54
, pp. 671-683
-
-
David, M.1
Daveran, M.-L.2
Baut, J.3
Dedieu, A.4
Domergue, O.5
Ghai, J.6
Hertig, C.7
Boistard, P.8
Kahn, D.9
-
2
-
-
0025878267
-
A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti
-
Gilles-Gonzalez, M. A., Ditta, G. S., and Helinski, D. R. (1991) A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti, Nature 350, 170-172.
-
(1991)
Nature
, vol.350
, pp. 170-172
-
-
Gilles-Gonzalez, M.A.1
Ditta, G.S.2
Helinski, D.R.3
-
3
-
-
0028236894
-
Intramolecular signal transduction within the FixJ transcriptional activator: In vitro evidence for the inhibitory effect of the phosphorylatable regulatory domain
-
Da Re, S., Bertagnoli, S., Fourment, J., Reyrat, J. M., and Kahn, D. (1994) Intramolecular signal transduction within the FixJ transcriptional activator: in vitro evidence for the inhibitory effect of the phosphorylatable regulatory domain, Nucleic Acids Res. 22, 1555-1561.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 1555-1561
-
-
Da Re, S.1
Bertagnoli, S.2
Fourment, J.3
Reyrat, J.M.4
Kahn, D.5
-
4
-
-
0027998874
-
Phosphorylation of the Rhizobium meliloti FixJ protein induces its binding to a compound regulatory region at the fixK promoter
-
Galinier, A., Garnerone, A. M., Reyrat, J. M., Kahn, D., Batut, J., and Boistard, P. (1994) Phosphorylation of the Rhizobium meliloti FixJ protein induces its binding to a compound regulatory region at the fixK promoter, J. Biol. Chem. 269, 23784-23789.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 23784-23789
-
-
Galinier, A.1
Garnerone, A.M.2
Reyrat, J.M.3
Kahn, D.4
Batut, J.5
Boistard, P.6
-
5
-
-
0033573063
-
Conformational changes induced by phosphorylation of the FixJ receiver domain
-
Birck, C., Mourey, L., Gouet, P., Fabry, B., Schumacher, J., Rousseau, P., Kahn, D., and Samama, J.-P. (1999) Conformational changes induced by phosphorylation of the FixJ receiver domain, Struct. Fold Des. 7, 1505-1515.
-
(1999)
Struct. Fold Des.
, vol.7
, pp. 1505-1515
-
-
Birck, C.1
Mourey, L.2
Gouet, P.3
Fabry, B.4
Schumacher, J.5
Rousseau, P.6
Kahn, D.7
Samama, J.-P.8
-
6
-
-
0032746809
-
Phosphorylation-induced dimerization of the FixJ receiver domain
-
Da Re, S., Schumacher, J., Rousseau, P., Fourment, J., Ebel, C., and Kahn, D. (1999) Phosphorylation-induced dimerization of the FixJ receiver domain. Mol. Microbiol. 34, 504-511.
-
(1999)
Mol. Microbiol.
, vol.34
, pp. 504-511
-
-
Da Re, S.1
Schumacher, J.2
Rousseau, P.3
Fourment, J.4
Ebel, C.5
Kahn, D.6
-
7
-
-
0024604475
-
Nucleotide sequence of the narL gene that is involved in global regulation of nitrate controlled respiratory genes of Escherichia coli
-
Gunsalus, R. P., Kalman, L. V., and Stewart, R. R. (1989) Nucleotide sequence of the narL gene that is involved in global regulation of nitrate controlled respiratory genes of Escherichia coli, Nucleic Acids Res. 17, 1965-1975.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 1965-1975
-
-
Gunsalus, R.P.1
Kalman, L.V.2
Stewart, R.R.3
-
8
-
-
0036786677
-
Dimerization allows DNA target site recognition by the NarL response regulator
-
Maris, A. E., Sawaya, M. R., Kaczor-Grzeskowiak, M., Jarvis, M. R., Bearson, S. M., Kopka, M. L., Schröder, I., Gunsalus, R. P., and Dickerson, R. E. (2002) Dimerization allows DNA target site recognition by the NarL response regulator, Nat. Struct. Biol. 9, 771-778.
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 771-778
-
-
Maris, A.E.1
Sawaya, M.R.2
Kaczor-Grzeskowiak, M.3
Jarvis, M.R.4
Bearson, S.M.5
Kopka, M.L.6
Schröder, I.7
Gunsalus, R.P.8
Dickerson, R.E.9
-
9
-
-
0036053872
-
DNA complexed structure of the key transcription factor initiating development in sporulating bacteria
-
Zhao, H., Msadek, T., Zapf, J., Madhusudan, Hoch, J. A., and Varughese, K. I. (2002) DNA complexed structure of the key transcription factor initiating development in sporulating bacteria, Structure (Cambridge) 10, 1041-1050.
-
(2002)
Structure (Cambridge)
, vol.10
, pp. 1041-1050
-
-
Zhao, H.1
Msadek, T.2
Zapf, J.3
Madhusudan4
Hoch, J.A.5
Varughese, K.I.6
-
10
-
-
0026748451
-
Mutational analysis of the Rhizobium meliloti nifA promoter
-
Agron, P. G., Ditta, G. S., and Helinski, D. R. (1992) Mutational analysis of the Rhizobium meliloti nifA promoter, J. Bacteriol. 174, 4120-4129.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4120-4129
-
-
Agron, P.G.1
Ditta, G.S.2
Helinski, D.R.3
-
11
-
-
0038349202
-
The uncoupling of oxygen sensing, phosphorylation signaling and transcriptional activation in oxygen sensor FixL and FixJ mutants
-
Saito, K., Ito, E., Hosono, K., Nakamura, K., Imai, K., Iizuka, T., Shiro, Y., and Nakamura, H. (2003) The uncoupling of oxygen sensing, phosphorylation signaling and transcriptional activation in oxygen sensor FixL and FixJ mutants, Mol. Microbiol. 48, 373-383.
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 373-383
-
-
Saito, K.1
Ito, E.2
Hosono, K.3
Nakamura, K.4
Imai, K.5
Iizuka, T.6
Shiro, Y.7
Nakamura, H.8
-
12
-
-
0002546906
-
Reconstruction of phase sensitive 2D NMR spectra by maximum entropy
-
Laue, E. D., Mayger, M. R., Stalling, J., and Staunton, J. (1986) Reconstruction of phase sensitive 2D NMR spectra by maximum entropy, J. Magn. Resort. 68, 14-29.
-
(1986)
J. Magn. Resort.
, vol.68
, pp. 14-29
-
-
Laue, E.D.1
Mayger, M.R.2
Stalling, J.3
Staunton, J.4
-
13
-
-
0001250026
-
1H 2D-NMR spectra by interactive computer-graphics
-
1H 2D-NMR spectra by interactive computer-graphics, J. Magn. Reson. 84, 627-633.
-
(1989)
J. Magn. Reson.
, vol.84
, pp. 627-633
-
-
Kraulis, P.J.1
-
14
-
-
9444245493
-
Correlating backbone amide and side chain resonances in larger proteins by multiple relayed triple resonance NMR
-
Grzesiek, S., and Bax, A. (1992) Correlating backbone amide and side chain resonances in larger proteins by multiple relayed triple resonance NMR, J. Am. Chem. Soc. 114, 6291-6293.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 6291-6293
-
-
Grzesiek, S.1
Bax, A.2
-
15
-
-
44049109615
-
An Efficient experiment for sequential backbone assignment of medium-sized isotropically enriched proteins
-
Grzesiek, S., and Bax, A. (1992) An Efficient experiment for sequential backbone assignment of medium-sized isotropically enriched proteins, J. Magn. Reson. 99, 201-207.
-
(1992)
J. Magn. Reson.
, vol.99
, pp. 201-207
-
-
Grzesiek, S.1
Bax, A.2
-
23
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination, Acta Crystallogr. D54, 905-921.
-
(1998)
Acta Crystallogr.
, vol.D54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
24
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski, R. A., Rullmann, J. A. C., MacArthur, M. W., Kaptein, R., and Thornton, J. M., (1996) AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR, J. Biomol. NMR 8, 477-486.
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
25
-
-
44949269218
-
Enpirical comparisons of models for chemical-shift calculation in proteins
-
Williamson, M. P. and Asakura, T. (1993) Enpirical comparisons of models for chemical-shift calculation in proteins, J. Magn, Reson., Ser. B 101, 63-71.
-
(1993)
J. Magn, Reson., Ser. B
, vol.101
, pp. 63-71
-
-
Williamson, M.P.1
Asakura, T.2
-
27
-
-
0000195671
-
Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy
-
Bodenhausen, G., and Ruden, D. J. (1980) Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy, Chem. Phys. Lett. 69, 185-189.
-
(1980)
Chem. Phys. Lett.
, vol.69
, pp. 185-189
-
-
Bodenhausen, G.1
Ruden, D.J.2
-
28
-
-
0027787894
-
2O in protein NMR. Application to sensitivity enhancement and NOE measurements
-
2O in protein NMR. Application to sensitivity enhancement and NOE measurements, J. Am. Chem. Soc., 115, 12593-12594.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 12593-12594
-
-
Grzesiek, S.1
Bax, A.2
-
29
-
-
0025341339
-
15N spectra of proteins: Heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin
-
15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin, Biochemistry 29, 4659-4667.
-
(1990)
Biochemistry
, vol.29
, pp. 4659-4667
-
-
Ikura, M.1
Kay, L.E.2
Bax, A.3
-
30
-
-
0028108941
-
Genetic regulation of nitrogen fixation in rhizobia
-
Fischer, H.-M. (1994) Genetic regulation of nitrogen fixation in rhizobia, Microbiol. Rev. 58, 352-386.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 352-386
-
-
Fischer, H.-M.1
-
31
-
-
0028907436
-
Calculation of protein structure with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connections
-
Nilges, M. (1995) Calculation of protein structure with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connections, J. Mol. Biol. 245, 645-660.
-
(1995)
J. Mol. Biol.
, vol.245
, pp. 645-660
-
-
Nilges, M.1
-
32
-
-
0029736725
-
Structure of the Escherichia coli response regulator NarL
-
Baikalov, I., Schröder, I., Kaczor-Grzeskowiak, M., Grzeskowiak, K., Gunsalus, R. P., and Dickerson, R. E. (1996) Structure of the Escherichia coli response regulator NarL, Biochemistry 35, 11053-11061.
-
(1996)
Biochemistry
, vol.35
, pp. 11053-11061
-
-
Baikalov, I.1
Schröder, I.2
Kaczor-Grzeskowiak, M.3
Grzeskowiak, K.4
Gunsalus, R.P.5
Dickerson, R.E.6
-
33
-
-
0031568318
-
The DNA-binding domain of OmpR: Crystal structures of a winged helix
-
Martinez-Hackert, E., and Stock, A. M. (1997) The DNA-binding domain of OmpR: crystal structures of a winged helix, Structure 5, 109-124.
-
(1997)
Structure
, vol.5
, pp. 109-124
-
-
Martinez-Hackert, E.1
Stock, A.M.2
-
34
-
-
0034602919
-
Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box
-
Okamura, H., Hanaoka, S., Nagadoi, A., Makino, K., and Nishimura, Y. (2000) Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box, J. Mol. Biol. 295, 1225-1236.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 1225-1236
-
-
Okamura, H.1
Hanaoka, S.2
Nagadoi, A.3
Makino, K.4
Nishimura, Y.5
-
35
-
-
0036174746
-
Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homologue from Thermotoga maritima
-
Buckler, D. R., Zhou, Y., and Stock, A. M. (2002) Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homologue from Thermotoga maritima, Structure (Cambridge) 10, 153-164.
-
(2002)
Structure (Cambridge)
, vol.10
, pp. 153-164
-
-
Buckler, D.R.1
Zhou, Y.2
Stock, A.M.3
-
36
-
-
0038154011
-
Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily
-
Robinson, V. L., Wu, T., and Stock, A. M. (2003) Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily, J. Bacteriol. 185, 4186-4194.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4186-4194
-
-
Robinson, V.L.1
Wu, T.2
Stock, A.M.3
-
37
-
-
0344237366
-
Solution structure and DNA binding of the effector domain from the global regulator PrrA (RegA) from Rhodobacter sphaeroides: Insights into DNA binding specificity
-
Laguri, C., Phillips-Jones, M. K., Williamson, M. P. (2003) Solution structure and DNA binding of the effector domain from the global regulator PrrA (RegA) from Rhodobacter sphaeroides: insights into DNA binding specificity, Nucleic Acids Res. 31, 6778-6787.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 6778-6787
-
-
Laguri, C.1
Phillips-Jones, M.K.2
Williamson, M.P.3
-
38
-
-
0037705334
-
Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box
-
Pristovsek, P., Sengupta, K., Löhr, F., Schäfer, B, von Trebra, M. W., Rüterjans, H., and Bernhard, F. (2003) Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box, J. Biol. Chem. 278, 17752-17759.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 17752-17759
-
-
Pristovsek, P.1
Sengupta, K.2
Löhr, F.3
Schäfer, B.4
Von Trebra, M.W.5
Rüterjans, H.6
Bernhard, F.7
-
39
-
-
0036786677
-
Dimerization allows DNA target site recognition by the NarL response regulator
-
Maris, A. E., Sawaya, M. R., Kaczor-Grzeskowiak, M., Jarvis, M. R., Bearson, S. M., Kopka, M. L., Schröder, I., Gunsalus, R. P., and Dickerson, R. E. (2002) Dimerization allows DNA target site recognition by the NarL response regulator, Nat. Struct. Biol. 9, 771-778.
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 771-778
-
-
Maris, A.E.1
Sawaya, M.R.2
Kaczor-Grzeskowiak, M.3
Jarvis, M.R.4
Bearson, S.M.5
Kopka, M.L.6
Schröder, I.7
Gunsalus, R.P.8
Dickerson, R.E.9
-
40
-
-
0033555689
-
Orientation of OmpR monomers within an OmpR:DNA complex determined by DNA affinity cleaving
-
Harrison-McMonagle, P., Denissova, N., Martinez-Hackert, E., Ebright, R. H., and Stock, A. M. (1999) Orientation of OmpR monomers within an OmpR:DNA complex determined by DNA affinity cleaving, J. Mol. Biol. 285, 555-566.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 555-566
-
-
Harrison-McMonagle, P.1
Denissova, N.2
Martinez-Hackert, E.3
Ebright, R.H.4
Stock, A.M.5
-
41
-
-
0026682657
-
Transcription factors: Structural families and principles of DNA recognition
-
Pabo, C. O., and Sauer, R. T. (1992) Transcription factors: structural families and principles of DNA recognition, Annu. Rev. Biochem. 61, 1053-1095.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 1053-1095
-
-
Pabo, C.O.1
Sauer, R.T.2
-
42
-
-
0037165634
-
Two distinct classes of FixJ binding sites defined by in vitro selection
-
Ferrieres, L., and Kahn, D. (2002) Two distinct classes of FixJ binding sites defined by in vitro selection, FEBS Lett. 517, 185-189.
-
(2002)
FEBS Lett.
, vol.517
, pp. 185-189
-
-
Ferrieres, L.1
Kahn, D.2
-
43
-
-
0034705327
-
A single amino acid substitution in the C terminus of OmpR alters DNA recognition and phosphorylation
-
Tran, V. K., Oropeza, R., and Kenney, L. J.(2000) A single amino acid substitution in the C terminus of OmpR alters DNA recognition and phosphorylation. J. Mol. Biol. 299, 1257-1270.
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 1257-1270
-
-
Tran, V.K.1
Oropeza, R.2
Kenney, L.J.3
-
44
-
-
0037168492
-
Effect of phosphorylation on the interdomain interaction of the response regulator, NarL
-
Eldridge, A. M., Kang, H. S., Johnson, E., Gunsalus, R., and Dahlquist, F. W. (2002) Effect of phosphorylation on the interdomain interaction of the response regulator, NarL, Biochemistry 41, 15173-15180.
-
(2002)
Biochemistry
, vol.41
, pp. 15173-15180
-
-
Eldridge, A.M.1
Kang, H.S.2
Johnson, E.3
Gunsalus, R.4
Dahlquist, F.W.5
-
45
-
-
21744447840
-
The response regulator OmpR oligomerizes via β-sheets to form head-to-head dimers
-
Maris, A. E., Walthers, D., Mattison, K., Byers, N., and Kenney, L. J. (2005) The response regulator OmpR oligomerizes via β-sheets to form head-to-head dimers, J. Mol. Biol. 350, 843-856.
-
(2005)
J. Mol. Biol.
, vol.350
, pp. 843-856
-
-
Maris, A.E.1
Walthers, D.2
Mattison, K.3
Byers, N.4
Kenney, L.J.5
-
46
-
-
0029896773
-
The activation of PhoB by acetylphosphate
-
McCleary, W. R. (1996) The activation of PhoB by acetylphosphate, Mol. Microbiol. 20, 1155-1163.
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 1155-1163
-
-
McCleary, W.R.1
-
47
-
-
0035965123
-
Promoter-specific involvement of the FixJ receiver domain in transcriptional activation
-
Ton-Hoang, B., Salhi, M., Schumacher, J, Da Re, S., and Kahn, D. (2001) Promoter-specific involvement of the FixJ receiver domain in transcriptional activation, J. Mol Biol. 312, 583-589.
-
(2001)
J. Mol Biol.
, vol.312
, pp. 583-589
-
-
Ton-Hoang, B.1
Salhi, M.2
Schumacher, J.3
Da Re, S.4
Kahn, D.5
-
48
-
-
0036384294
-
Insights into signal transduction revealed by the low resolution structure of the FixJ response regulator
-
Birck, C., Malfois, M., Svergun, D., and Samama, J. (2002) Insights into signal transduction revealed by the low resolution structure of the FixJ response regulator, J. Mol. Biol. 321, 447-457.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 447-457
-
-
Birck, C.1
Malfois, M.2
Svergun, D.3
Samama, J.4
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