-
1
-
-
2442436935
-
Evaluation of local structure alphabets based on residue burial
-
Karchin R, Cline M, Karplus K: Evaluation of local structure alphabets based on residue burial. Proteins 2004, 55(3):508-518.
-
(2004)
Proteins
, vol.55
, Issue.3
, pp. 508-518
-
-
Karchin, R.1
Cline, M.2
Karplus, K.3
-
2
-
-
14644400399
-
An amino acid has two sides: A new 2D measure provides a different view of solvent exposure
-
Hamelryck T: An amino acid has two sides: A new 2D measure provides a different view of solvent exposure. Proteins 2005, 59(1):38-48.
-
(2005)
Proteins
, vol.59
, Issue.1
, pp. 38-48
-
-
Hamelryck, T.1
-
3
-
-
10844226577
-
Predicting absolute contact numbers of native protein structure from amino acid sequence
-
Kinjo AR, Horimoto K, Nishikawa K: Predicting absolute contact numbers of native protein structure from amino acid sequence. Proteins 2005, 58(1):158-165.
-
(2005)
Proteins
, vol.58
, Issue.1
, pp. 158-165
-
-
Kinjo, A.R.1
Horimoto, K.2
Nishikawa, K.3
-
4
-
-
0036568293
-
Prediction of coordination number and relative solvent accessibility in proteins
-
Pollastri G, Baldi P, Fariselli P, Casadio R: Prediction of coordination number and relative solvent accessibility in proteins. Proteins 2002, 47(2):142-153.
-
(2002)
Proteins
, vol.47
, Issue.2
, pp. 142-153
-
-
Pollastri, G.1
Baldi, P.2
Fariselli, P.3
Casadio, R.4
-
5
-
-
0035237804
-
Improved prediction of the number of residue contacts in proteins by recurrent neural networks
-
Pollastri G, Baldi P, Fariselli P, Casadio R: Improved prediction of the number of residue contacts in proteins by recurrent neural networks. Bioinformatics 2001, 17 Suppl 1:S234-242.
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
-
-
Pollastri, G.1
Baldi, P.2
Fariselli, P.3
Casadio, R.4
-
6
-
-
6344258643
-
Prediction of protein accessible surface areas by support vector regression
-
Yuan Z, Huang B: Prediction of protein accessible surface areas by support vector regression. Proteins 2004, 57(3):558-564.
-
(2004)
Proteins
, vol.57
, Issue.3
, pp. 558-564
-
-
Yuan, Z.1
Huang, B.2
-
8
-
-
13944277320
-
Prediction of protein B-factor profiles
-
Yuan Z, Bailey TL, Teasdale RD: Prediction of protein B-factor profiles. Proteins 2005, 58(4):905-912.
-
(2005)
Proteins
, vol.58
, Issue.4
, pp. 905-912
-
-
Yuan, Z.1
Bailey, T.L.2
Teasdale, R.D.3
-
9
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W, Sander C: Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 1983, 22(12):2577-2637.
-
(1983)
Biopolymers
, vol.22
, Issue.12
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
10
-
-
0029885547
-
Predicting solvent accessibility: Higher accuracy using Bayesian statistics and optimized residue substitution classes
-
Thompson MJ, Goldstein RA: Predicting solvent accessibility: higher accuracy using Bayesian statistics and optimized residue substitution classes. Proteins 1996, 25(1):38-47.
-
(1996)
Proteins
, vol.25
, Issue.1
, pp. 38-47
-
-
Thompson, M.J.1
Goldstein, R.A.2
-
11
-
-
0028109886
-
Conservation and prediction of solvent accessibility in protein families
-
Rost B, Sander C: Conservation and prediction of solvent accessibility in protein families. Proteins 1994, 20(3):216-226.
-
(1994)
Proteins
, vol.20
, Issue.3
, pp. 216-226
-
-
Rost, B.1
Sander, C.2
-
12
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
13
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones DT: Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol 1999, 292(2):195-202.
-
(1999)
J. Mol. Biol.
, vol.292
, Issue.2
, pp. 195-202
-
-
Jones, D.T.1
-
16
-
-
0002714543
-
Making large-Scale SVM Learning Practical
-
Edited by Schölkopf B, Burges C, Smola A: MIT Press
-
Joachims T: Making large-Scale SVM Learning Practical. In: Advances in Kernel Methods - Support Vector Learning. Edited by Schölkopf B, Burges C, Smola A: MIT Press; 1999.
-
(1999)
Advances in Kernel Methods - Support Vector Learning
-
-
Joachims, T.1
-
17
-
-
0037250308
-
PDB-REPRDB: A database of representative protein chains from the Protein Data Bank (PDB) in 2003
-
Noguchi T, Akiyama Y: PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003. Nucleic Acids Res 2003, 31(1):492-493.
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.1
, pp. 492-493
-
-
Noguchi, T.1
Akiyama, Y.2
|