Structure of microbial communities in ethanol biofilters

Chemical Engineering Journal

Volumn 113, Issue 2-3, 2005, Pages 135-143

  Steele, Joshua A ^a   Ozis, Fethiye ^b   Fuhrman, Jed A ^a   Devinny, Joseph S ^b  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^b NONE   (United States)

Author keywords

ARISA; Bacterial community; Biofilters

Indexed keywords

BACTERIA; BIODIVERSITY; CELL CULTURE; DNA; ECOLOGY; ETHANOL; FILTRATION; MICROBIOLOGY; RNA; SAND;

AUTOMATED RIBOSOMAL RNA INTERGENIC SPACE ANALYSIS (ARISA); BACTERIAL COMMUNITY; BIOFILTRATION; ETHANOL BIOFILTERS;

BIOFILTERS;

BIOFILTER;

BACTERIA (MICROORGANISMS);

EID: 27144542692     PISSN: 13858947     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cej.2005.04.011     Document Type: Article

References (24)

1. J.A. Grove, H. Kautola, S. Javadpour, M. Moo-Young, and W.A. Anderson Assessment of changes in the microorganism community in a biofilter Biochem. Eng. J. 18 2 2004 111 114
2. U. Friedrich, K. Prior, K. Altendorf, and A. Lipski High bacterial diversity of a waste gas-degrading community in an industrial biofilter as shown by a 16S rDNA clone library Environ. Microbiol. 4 11 2002 721 734
3. M.A. Bruns, J.R. Hanson, J. Mefford, and K.M. Scow Isolate PM1 populations are dominant and novel methyl tert-butyl ether-degrading bacteria in compost biofilter enrichments Environ. Microbiol. 3 3 2001 220 225
4. Y. Sakano, and L. Kerkhof Assessment of changes in microbial community structure during operation of an ammonia biofilter with molecular tools Appl. Environ. Microbiol. 64 12 1998 4877 4882
5. H.Y. Hu, K. Fujie, H. Nakagome, K. Urano, and A. Katayama Quantitative analyses of the change in microbial diversity in a bioreactor for wastewater treatment based on respiratory quinines Water Res. 33 15 1999 3263 3270
6. V. von Keitz, A. Schramm, K. Altendorf, and A. Lipski Characterization of microbial communities of biofilters by phospholipid fatty acid analysis and rRNA targeted oligonucleotide probes Systematic Appl. Microbiol. 22 4 1999 626 634
7. T.S. Webster, J.S. Devinny, E.M. Torres, and S.S. Basrai Microbial ecosystems in compost and granular activated carbon biofilters Biotechnol. Bioeng. 53 3 1997 296 303
8. D.M. Moll, R.S. Summers, A.C. Fonseca, and W. Matheis Impact of temperature on drinking water biofilter performance and microbial community structure Environ. Sci. Technol. 33 14 1999 2377 2382
9. U. Friedrich, M.M. Naismith, K. Altendorf, and A. Lipski Community analysis of biofilters using fluorescence in situ hybridization including a new probe for the Xanthomonas branch of the class Proteobacteria Appl. Environ. Microbiol. 65 8 1999 3547 3554
10. U. Friedrich, H. Van Langenhove, K. Altendorf, and A. Lipski Microbial community and physicochemical analysis of an industrial waste gas biofilter and design of 16S rRNA-targeting oligonucleotide probes Environ. Microbiol. 5 3 2003 183 201
11. C. Li, and W.M. Moe Assessment of microbial populations in methyl ethyl ketone degrading biofilters by denaturing gradient gel electrophoresis Appl. Microbiol. Biotechnol. 64 4 2004 568 575
12. A.C. Fonseca, R.S. Summers, and M.T. Hernandez Comparative measurements of microbial activity in drinking water biofilters Water Res. 35 16 2001 3817 3824
13. Y. Ahn, W. Park, R. Tatavarty, and I.S. Kim Comparative analysis of vertical heterogeneity of microbial community in sulfur-packed reactor used for autotrophic nitrate removal J. Environ. Sci. Health Part A: Toxic/Hazard. Substances Environ. Eng. 39 7 2004 1805 1818
14. S. Wuertz, S. Okabe, and M. Hausner Microbial communities and their interactions in biofilm systems: An overview Water Sci. Technol. 49 11/12 2004 327 336
15. M.C. Horner-Devine, M.A. Leibold, V.H. Smith, and B.J.M. Bohannan Bacterial diversity patterns along a gradient of primary productivity Ecol. Lett. 6 7 2003 613 622
16. M.V. Brown, M.S. Schwalbach, I. Hewson, J.A. Fuhrman, Coupling 16S-ITS rDNA clone libraries and ARISA to show marine microbial diversity; development and application to a time series, Environ. Microbiol., in press.
17. T. Leuders, and M.W. Friedrich Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA Genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts Appl. Environ. Microbiol. 69 1 2003 320 326
18. J. Borneman, and E.W. Triplett Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation Appl. Environ. Microbiol. 63 7 1997 2647 2653
19. E. Avaniss-Aghajani, K. Jones, D. Chapman, and C. Brunk A molecular technique for identification of bacteria using small subunit ribosomal RNA sequences Biotechniques 77 1994 144 149
20. G. Muyzer, E.C. Dewaal, and A.G. Uitterlinden Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16s ribosomal-RNA Appl. Environ. Microbiol. 59 3 1993 695 700
21. M.M. Fisher, and E.W. Triplett Automated approach for ribsomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities Appl. Environ. Microbiol. 65 10 1999 4630 4836
22. T. Nukunya, A pore network model for clogging in biofilters, Ph.D. Thesis, University of Southern California, 2004.
23. P. Legendre, and L. Legendre Numericalecology Developments in Environmental Modelling 20 vol. 1 1998 Elsevier Amsterdam p. 853
24. J.S. Devinny, and D.S. Hodge Formation of acidic and toxic intermediates in overloaded ethanol biofilters J. Air Waste Manage. Assoc. 45 2 1995 125 131