-
1
-
-
0031596608
-
2 as a substrate in the cytoplasm of bacteria under aerobic and microaerobic conditions
-
2 as a substrate in the cytoplasm of bacteria under aerobic and microaerobic conditions. J Bacteriol 180, 2133-2136.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2133-2136
-
-
Arras, T.1
Schirawski, J.2
Unden, G.3
-
2
-
-
0141737064
-
+ redox poise in Streptomyces coelicolor A3(2)
-
+ redox poise in Streptomyces coelicolor A3(2). EMBO J 22, 4856-4865.
-
(2003)
EMBO J.
, vol.22
, pp. 4856-4865
-
-
Brekasis, D.1
Paget, M.S.2
-
3
-
-
0038444555
-
Chill induction of the SigB-dependent general stress response in Bacillus subtilis and its contribution to low-temperature adaptation
-
Brigulla, M., Hoffmann, T., Krisp, A., Völker, A., Bremer, E. & Völker, U. (2003). Chill induction of the SigB-dependent general stress response in Bacillus subtilis and its contribution to low-temperature adaptation. J Bacteriol 185, 4305-4314.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4305-4314
-
-
Brigulla, M.1
Hoffmann, T.2
Krisp, A.3
Völker, A.4
Bremer, E.5
Völker, U.6
-
4
-
-
2142738304
-
WEBLOGO: A sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M. & Brenner, S. E. (2004). WEBLOGO: a sequence logo generator. Genome Res 14, 1188-1190.
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
5
-
-
0028844507
-
Anaerobic transcription activation in Bacillus subtilis: Identification of distinct FNR-dependent and -independent regulatory mechanisms
-
Cruz Ramos, H., Boursier, L., Moszer, I., Kunst, F., Danchin, A. & Glaser, P. (1995). Anaerobic transcription activation in Bacillus subtilis: identification of distinct FNR-dependent and -independent regulatory mechanisms. EMBO J 14, 5984-5994.
-
(1995)
EMBO J.
, vol.14
, pp. 5984-5994
-
-
Cruz Ramos, H.1
Boursier, L.2
Moszer, I.3
Kunst, F.4
Danchin, A.5
Glaser, P.6
-
6
-
-
0000343873
-
Fermentative metabolism of Bacillus subtilis: Physiology and regulation of gene expression
-
Cruz Ramos, H., Hoffmann, T., Marino, M., Nedjari, H., Presecan-Siedel, E., Dreesen, O., Glaser, P. & Jahn, D. (2000). Fermentative metabolism of Bacillus subtilis: physiology and regulation of gene expression. J Bacteriol 182, 3072-3080.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 3072-3080
-
-
Cruz Ramos, H.1
Hoffmann, T.2
Marino, M.3
Nedjari, H.4
Presecan-Siedel, E.5
Dreesen, O.6
Glaser, P.7
Jahn, D.8
-
7
-
-
1642329678
-
Transcriptional activation by Bacillus subtilis ResD: Tandem binding to target elements and phosphorylation-dependent and -independent transcriptional activation
-
Geng, H., Nakano, S. & Nakano, M. M. (2004). Transcriptional activation by Bacillus subtilis ResD: tandem binding to target elements and phosphorylation-dependent and -independent transcriptional activation. J Bacteriol 186, 2028-2037.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2028-2037
-
-
Geng, H.1
Nakano, S.2
Nakano, M.M.3
-
9
-
-
15744375834
-
The truncated oxygen-avid hemoglobin from Bacillus subtilis: X-ray structure and ligand binding properties
-
Giangiacomo, L., Ilari, A., Boffi, A., Morea, V. & Chiancone, E. (2005). The truncated oxygen-avid hemoglobin from Bacillus subtilis: X-ray structure and ligand binding properties. J Biol Chem 280, 9192-9202.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 9192-9202
-
-
Giangiacomo, L.1
Ilari, A.2
Boffi, A.3
Morea, V.4
Chiancone, E.5
-
10
-
-
0027423563
-
Bacillus subtilis genome project: Cloning and sequencing of the 97 kb region from 325 degrees to 333 degrees
-
& 14 other authors
-
Glaser, P., Kunst, F., Arnaud, M. & 14 other authors (1993). Bacillus subtilis genome project: cloning and sequencing of the 97 kb region from 325 degrees to 333 degrees. Mol Microbiol 10, 371-384.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 371-384
-
-
Glaser, P.1
Kunst, F.2
Arnaud, M.3
-
12
-
-
0030597337
-
Plasmids for ectopic integration in Bacillus subtilis
-
Guerout-Fleury, A. M., Frandsen, N. & Stragier, P. (1996). Plasmids for ectopic integration in Bacillus subtilis. Gene 180, 57-61.
-
(1996)
Gene
, vol.180
, pp. 57-61
-
-
Guerout-Fleury, A.M.1
Frandsen, N.2
Stragier, P.3
-
13
-
-
0034987011
-
General stress response of Bacillus subtilis and other bacteria
-
Hecker, M. & Völker, U. (2001). General stress response of Bacillus subtilis and other bacteria. Adv Microb Physiol 44, 35-91.
-
(2001)
Adv. Microb. Physiol.
, vol.44
, pp. 35-91
-
-
Hecker, M.1
Völker, U.2
-
14
-
-
0022822105
-
Molecular properties, genetics, and biosynthesis of Bacillus subtilis succinate dehydrogenase complex
-
Hederstedt, L. (1986). Molecular properties, genetics, and biosynthesis of Bacillus subtilis succinate dehydrogenase complex. Methods Enzymol 126, 399-414.
-
(1986)
Methods Enzymol.
, vol.126
, pp. 399-414
-
-
Hederstedt, L.1
-
15
-
-
0025840353
-
Genetic analysis in Bacillus subtilis
-
Hoch, J. A (1991). Genetic analysis in Bacillus subtilis. Methods Enzymol 204, 305-320.
-
(1991)
Methods Enzymol.
, vol.204
, pp. 305-320
-
-
Hoch, J.A.1
-
16
-
-
0026712261
-
An inverted repeat preceding the Bacillus subtilis glpD gene is a conditional terminator of transcription
-
Holmberg, C. & Rutberg, L. (1992). An inverted repeat preceding the Bacillus subtilis glpD gene is a conditional terminator of transcription. Mol Microbiol 6, 2931-2938.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2931-2938
-
-
Holmberg, C.1
Rutberg, L.2
-
17
-
-
0034813268
-
Sigma A recognition sites in the Bacillus subtilis genome
-
Jarmer, H., Larsen, T. S., Krogh, A., Saxild, H. H., Brunak, S. & Knudsen, S. (2001). Sigma A recognition sites in the Bacillus subtilis genome. Microbiology 147, 2417-2424.
-
(2001)
Microbiology
, vol.147
, pp. 2417-2424
-
-
Jarmer, H.1
Larsen, T.S.2
Krogh, A.3
Saxild, H.H.4
Brunak, S.5
Knudsen, S.6
-
18
-
-
0040643267
-
Cytochrome bd terminal oxidase
-
Jünemann, S. (1997). Cytochrome bd terminal oxidase. Biochim Biophys Acta 1321, 107-127.
-
(1997)
Biochim. Biophys. Acta
, vol.1321
, pp. 107-127
-
-
Jünemann, S.1
-
19
-
-
0344153756
-
Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: Exploiting the metabolic spectrum by controlling alternative gene programs
-
Korner, H., Sofia, H. J. & Zumft, W. G. (2003). Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. FEMS Microbiol Rev 27, 559-592.
-
(2003)
FEMS Microbiol. Rev.
, vol.27
, pp. 559-592
-
-
Korner, H.1
Sofia, H.J.2
Zumft, W.G.3
-
20
-
-
0027365675
-
Catabolite repression of beta-glucanase synthesis in Bacillus subtilis
-
Kruger, S., Stülke, J. & Hecker, M. (1993). Catabolite repression of beta-glucanase synthesis in Bacillus subtilis. J Gen Microbiol 139, 2047-2054.
-
(1993)
J. Gen. Microbiol.
, vol.139
, pp. 2047-2054
-
-
Kruger, S.1
Stülke, J.2
Hecker, M.3
-
21
-
-
0347126296
-
DBTBS: Database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics
-
(database issue)
-
Makita, Y., Nakao, M., Ogasawara, N. & Nakai, K. (2004). DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics. Nucleic Acids Res 32 (database issue), D75-D77.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Makita, Y.1
Nakao, M.2
Ogasawara, N.3
Nakai, K.4
-
22
-
-
0033972849
-
Changes in protein synthesis during the adaptation of Bacillus subtilis to anaerobic growth conditions
-
Marino, M., Hoffmann, T., Schmid, R., Mobitz, H. & Jahn, D. (2000). Changes in protein synthesis during the adaptation of Bacillus subtilis to anaerobic growth conditions. Microbiology 146, 97-105.
-
(2000)
Microbiology
, vol.146
, pp. 97-105
-
-
Marino, M.1
Hoffmann, T.2
Schmid, R.3
Mobitz, H.4
Jahn, D.5
-
23
-
-
0035103809
-
Catabolite repression mediated by the CcpA protein in Bacillus subtilis: Novel modes of regulation revealed by whole-genome analyses
-
Moreno, M. S., Schneider, B. L., Maile, R. R., Weyler, W. & Saier, M. H. (2001). Catabolite repression mediated by the CcpA protein in Bacillus subtilis: novel modes of regulation revealed by whole-genome analyses. Mol Microbiol 39, 1366-1381.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 1366-1381
-
-
Moreno, M.S.1
Schneider, B.L.2
Maile, R.R.3
Weyler, W.4
Saier, M.H.5
-
24
-
-
1642374441
-
Anaerobiosis
-
Edited by A. L. Sonenshein, J. A. Hoch & R. Losick. Washington, DC: American Society for Microbiology
-
Nakano, M. M. & Zuber, P. (2002). Anaerobiosis. In Bacillus subtilis and its Closest Relatives: from Genes to Cells, pp. 393-404. Edited by A. L. Sonenshein, J. A. Hoch & R. Losick. Washington, DC: American Society for Microbiology.
-
(2002)
Bacillus Subtilis and Its Closest Relatives: From Genes to Cells
, pp. 393-404
-
-
Nakano, M.M.1
Zuber, P.2
-
25
-
-
0033812771
-
Interaction of ResD with regulatory regions of anaerobically induced genes in Bacillus subtilis
-
Nakano, M. M., Zhu, Y., Lacelle, M., Zhang, X. & Hulett, F. M. (2000). Interaction of ResD with regulatory regions of anaerobically induced genes in Bacillus subtilis. Mol Microbiol 37, 1198-1207.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 1198-1207
-
-
Nakano, M.M.1
Zhu, Y.2
Lacelle, M.3
Zhang, X.4
Hulett, F.M.5
-
26
-
-
0034810821
-
Global analysis of the general stress response of Bacillus subtilis
-
Petersohn, A., Brigulla, M., Haas, S., Hoheisel, J. D., Völker, U. & Hecker, M. (2001). Global analysis of the general stress response of Bacillus subtilis. J Bacteriol 183, 5617-5631.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5617-5631
-
-
Petersohn, A.1
Brigulla, M.2
Haas, S.3
Hoheisel, J.D.4
Völker, U.5
Hecker, M.6
-
27
-
-
0033928977
-
Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation
-
Poole, R. K. & Cook, G. M. (2000). Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation. Adv Microb Physiol 43, 165-224.
-
(2000)
Adv. Microb. Physiol.
, vol.43
, pp. 165-224
-
-
Poole, R.K.1
Cook, G.M.2
-
28
-
-
0032743239
-
Catabolite regulation of the pta gene as part of carbon flow pathways in Bacillus subtilis
-
Presecan-Siedel, E., Galinier, A., Longin, R., Deutscher, J., Danchin, A., Glaser, P. & Martin-Verstraete, I. (1999). Catabolite regulation of the pta gene as part of carbon flow pathways in Bacillus subtilis. J Bacteriol 181, 6889-6897.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 6889-6897
-
-
Presecan-Siedel, E.1
Galinier, A.2
Longin, R.3
Deutscher, J.4
Danchin, A.5
Glaser, P.6
Martin-Verstraete, I.7
-
29
-
-
0035724157
-
Genome-wide analysis of the general stress response in Bacillus subtilis
-
Price, C. W., Fawcett, P., Ceremonie, H., Su, N., Murphy, C. K. & Youngman, P. (2001). Genome-wide analysis of the general stress response in Bacillus subtilis. Mol Microbiol 41, 757-774.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 757-774
-
-
Price, C.W.1
Fawcett, P.2
Ceremonie, H.3
Su, N.4
Murphy, C.K.5
Youngman, P.6
-
30
-
-
0037099005
-
BioArray Software Environment (BASE): A platform for comprehensive management and analysis of microarray data
-
SOFTWARE0003
-
Saal, L. H., Troein, C., Vallon-Christersson, J., Gruvberger, S., Borg, A. & Peterson, C. (2002). BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data. Genome Biol 3, SOFTWARE0003.
-
(2002)
Genome Biol.
, vol.3
-
-
Saal, L.H.1
Troein, C.2
Vallon-Christersson, J.3
Gruvberger, S.4
Borg, A.5
Peterson, C.6
-
32
-
-
3042857779
-
Bacillus subtilis YdiH is a direct negative regulator of the cydABCD operon
-
Schau, M., Chen, Y. & Hulett, F. M. (2004). Bacillus subtilis YdiH is a direct negative regulator of the cydABCD operon. J Bacteriol 186, 4585-4595.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 4585-4595
-
-
Schau, M.1
Chen, Y.2
Hulett, F.M.3
-
33
-
-
0030897419
-
Identification and characterization of the ccdA gene, required for cytochrome c synthesis in Bacillus subtilis
-
Schiött, T., von Wachenfeldt, C. & Hederstedt, L. (1997). Identification and characterization of the ccdA gene, required for cytochrome c synthesis in Bacillus subtilis. J Bacteriol 179, 1962-1973.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1962-1973
-
-
Schiött, T.1
von Wachenfeldt, C.2
Hederstedt, L.3
-
34
-
-
11844285686
-
X-ray structure of a Rex-family repressor/NADH complex insights into the mechanism of redox sensing
-
Sickmier, E. A., Brekasis, D., Paranawithana, S., Bonanno, J. B., Paget, M. S., Burley, S. K. & Kielkopf, C. L. (2005). X-ray structure of a Rex-family repressor/NADH complex insights into the mechanism of redox sensing. Structure 13, 43-54.
-
(2005)
Structure
, vol.13
, pp. 43-54
-
-
Sickmier, E.A.1
Brekasis, D.2
Paranawithana, S.3
Bonanno, J.B.4
Paget, M.S.5
Burley, S.K.6
Kielkopf, C.L.7
-
35
-
-
0029989167
-
Regulators of aerobic and anaerobic respiration in Bacillus subtilis
-
Sun, G., Sharkova, E., Chesnut, R., Birkey, S., Duggan, M. F., Sorokin, A., Pujic, P., Ehrlich, S. D. & Hulett, F. M. (1996). Regulators of aerobic and anaerobic respiration in Bacillus subtilis. J Bacteriol 178, 1374-1385.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 1374-1385
-
-
Sun, G.1
Sharkova, E.2
Chesnut, R.3
Birkey, S.4
Duggan, M.F.5
Sorokin, A.6
Pujic, P.7
Ehrlich, S.D.8
Hulett, F.M.9
-
36
-
-
0034731822
-
A web site for the computational analysis of yeast regulatory sequences
-
van Helden, J., Andre, B. & Collado-Vides, J. (2000). A web site for the computational analysis of yeast regulatory sequences. Yeast 16, 177-187.
-
(2000)
Yeast
, vol.16
, pp. 177-187
-
-
van Helden, J.1
Andre, B.2
Collado-Vides, J.3
-
37
-
-
0033962203
-
A PP2C phosphatase containing a PAS domain is required to convey signals of energy stress to the sigmaB transcription factor of Bacillus subtilis
-
Vijay, K., Brody, M. S., Fredlund, E. & Price, C. W. (2000). A PP2C phosphatase containing a PAS domain is required to convey signals of energy stress to the sigmaB transcription factor of Bacillus subtilis. Mol Microbiol 35, 180-188.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 180-188
-
-
Vijay, K.1
Brody, M.S.2
Fredlund, E.3
Price, C.W.4
-
38
-
-
0013132577
-
Respiratory cytochromes, other heme proteins, and heme biosynthesis
-
Edited by A. L. Sonenshein, J. A. Hoch & R. Losick. Washington, DC: American Society for Microbiology
-
von Wachenfeldt, C. & Hederstedt, L. (2002). Respiratory cytochromes, other heme proteins, and heme biosynthesis. In Bacillus subtilis and its Closest Relatives: from Genes to Cells, pp. 163-179. Edited by A. L. Sonenshein, J. A. Hoch & R. Losick. Washington, DC: American Society for Microbiology.
-
(2002)
Bacillus Subtilis and Its Closest Relatives: From Genes to Cells
, pp. 163-179
-
-
von Wachenfeldt, C.1
Hederstedt, L.2
-
40
-
-
0032415869
-
Cytochrome bd biosynthesis in Bacillus subtilis: Characterization of the cydABCD operon
-
Winstedt, L., Yoshida, K., Fujita, Y. & von Wachenfeldt, C. (1998). Cytochrome bd biosynthesis in Bacillus subtilis: characterization of the cydABCD operon. J Bacteriol 180, 6571-6580.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 6571-6580
-
-
Winstedt, L.1
Yoshida, K.2
Fujita, Y.3
von Wachenfeldt, C.4
-
41
-
-
0037059826
-
Truncated hemoglobins: A new family of hemoglobins widely distributed in bacteria, unicellular eukaryotes, and plants
-
Wittenberg, J. B., Bolognesi, M., Wittenberg, B. A. & Guertin, M. (2002). Truncated hemoglobins: a new family of hemoglobins widely distributed in bacteria, unicellular eukaryotes, and plants. J Biol Chem 277, 871-874.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 871-874
-
-
Wittenberg, J.B.1
Bolognesi, M.2
Wittenberg, B.A.3
Guertin, M.4
-
42
-
-
0037417895
-
A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis
-
Yang, H., Haddad, H., Tomas, C., Alsaker, K. & Papoutsakis, E. T. (2003). A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis. Proc Natl Acad Sci U S A 100, 1122-1127.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 1122-1127
-
-
Yang, H.1
Haddad, H.2
Tomas, C.3
Alsaker, K.4
Papoutsakis, E.T.5
-
43
-
-
0035253527
-
Combined transcriptome and proteome analysis as a powerful approach to study genes under glucose repression in Bacillus subtilis
-
& 9 other authors
-
Yoshida, K., Kobayashi, K., Miwa, Y. & 9 other authors (2001). Combined transcriptome and proteome analysis as a powerful approach to study genes under glucose repression in Bacillus subtilis. Nucleic Acids Res 29, 683-692.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 683-692
-
-
Yoshida, K.1
Kobayashi, K.2
Miwa, Y.3
-
44
-
-
0001673849
-
Use of transposons and integrational vectors for mutagenesis and construction of gene fusions in Bacillus subtilis
-
Edited by C. R. Harwood & S. M. Cutting. New York: Wiley
-
Youngman, P. (1990). Use of transposons and integrational vectors for mutagenesis and construction of gene fusions in Bacillus subtilis. In Molecular Biological Methods for Bacillus, pp. 221-266. Edited by C. R. Harwood & S. M. Cutting. New York: Wiley.
-
(1990)
Molecular Biological Methods for Bacillus
, pp. 221-266
-
-
Youngman, P.1
|