Rapid differentiation among bacteria that cause gastroenteritis by use of low-resolution Raman spectroscopy and PLS discriminant analysis

Analytical and Bioanalytical Chemistry

Volumn 383, Issue 4, 2005, Pages 701-706

  Mello, Cesar ^a   Ribeiro, Diórginis ^a   Novaes, Fábio ^a   Poppi, Ronei J ^b  

^a UNIVERSIDADE DE FRANCA   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

Author keywords

Bacteria; Gastroenteritis; PLS discriminant analysis; Raman spectroscopy

Indexed keywords

BACTERIA; ESCHERICHIA COLI; MICROORGANISMS; PHYSIOLOGY; RAMAN SCATTERING; SEMICONDUCTOR LASERS; SOLUTIONS;

GASTROENTERITIS; PLS DISCRIMINANT ANALYSIS; RAMAN SPECTROMETER; REAGENTS;

MICROBIOLOGY;

ARTICLE; BACTERIUM; CALIBRATION; CHEMICAL MODEL; CHEMISTRY; ESCHERICHIA COLI; GASTROENTERITIS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; MULTIVARIATE ANALYSIS; RAMAN SPECTROMETRY; REGRESSION ANALYSIS; SALMONELLA; SHIGELLA FLEXNERI;

BACTERIA; CALIBRATION; ESCHERICHIA COLI; GASTROENTERITIS; LEAST-SQUARES ANALYSIS; MODELS, CHEMICAL; MULTIVARIATE ANALYSIS; SALMONELLA; SHIGELLA FLEXNERI; SPECTRUM ANALYSIS, RAMAN;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; SALMONELLA CHOLERAESUIS; SHIGELLA FLEXNERI;

EID: 27144531369     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-005-0017-6     Document Type: Article

References (26)

1. Koneman EW, Allen SD, Janda WM, Schreckenberger PC, Win WC (2001) Color atlas and textbook of diagnostic microbiology, 5th edn. Lippincott-Raven, New York
2. Mulvaney SP, Keating CD (2000) Anal Chem 72:153R
3. Tang YW, Ellis NM, Hopkins MK, Smith DH, Dodge DE, Persing DH (1998) J Clin Microbiol 36:3674
4. Tang YW, Procop GW, Persing DH (1997) Clin Chem 43:2021
5. Fredricks DN, Relman DA (1998) J Clin Microbiol 36:2810
6. Mullis KB, Faloona FA (1987) Methods Enzymol 155:49
7. Grabar P, Burtin P (1964) Immunoelectrophoresis. Elsevier, Amsterdam
8. Bishop ML, Duben-Engelkirk JL, Fody EP (2000) Clinical chemistry: principles, procedures and correlations, 4th edn. Lippincott, Willians and Wilkins, London
9. MaquelinChoo-Smith KL-P, Van Vreeswijk T, Endtz HP, Smith B, Bennet R, Bruining HA, Puppels GJ (2000) Anal Chem 72:12
10. Naumann D, Helm D, Labischinski H (1991) Nature 351:81
11. Helm D, Labischinski H, Naumann D (1991) J Microbiol Methods 14:127
12. Choo-Smith LP, Marquelin K, van Vreeswijk T, Bruining HA, Puppels GJ, Ngo Thi NA, Kirschner C, Naumann D, Ami D, Villa AM, Orsini F, Doglia SM, Lamfarraj H, Sockalingum GD, Manfait M, Allouch P, Endtz HP (2001) Appl Environ Microbiol 67(4):1461
13. Kirschner C, Marquelin K, Pina P, Ngo Thi NA, Choo-Smith LP, Sockalingum GD, Sandt GD, Ami D, Orsini F, Doglia SM, Allouch P, Manfait M, Puppels GJ, Naumann D (2001) J Clin Microbiol 39(5):1763
14. Goodacre R, Jarvis RM (2004) Anal Chem76:40
15. Clarke RH, Londhe S, Womble ME (1998) Spectroscopy 13:28
16. Vanderginste BGM, Massart DL, Buydens LMC, de Jong S, Lewi PJ, Smeyers-Verbeke J (1998) Handbook of chemometrics and qualimetrics: Part B. Elsevier, Amsterdam
17. Louwerse DJ, Tates AA, Smilde AK, Koot GLM, Berndt H (1999) Chemom Intell Lab Syst 46:197
18. MacFaddin JF (2000) Biochemical tests for identification of medical bacteria. Lippincott, Williams & Wilkins, London
19. Walczak B, DenBogaert BV, Massart DL (1996) Anal Chem 68:1742
20. Arfken GB, Weber JH (1995) Mathematical methods for physicists, 4th edn. Academic, San Diego, California
21. Wise BM, Gallagher NB (1995) PLS_Toolbox for use with Matlab, Version 1.5.1, Eigenvector Technologies, Manson
22. Harris PI, Chapman D (1996) In: Mantsch HH, Chapman D (eds) Infrared spectroscopy of biomolecules, Wiley, New York
23. Miyazawa T (1967) Poly-α-amino acids. Marcel Dekker, New York
24. Krimm S, Bandekar J (1986) Adv Protein Chem 38:181
25. Ham S, Kim J-H, Lee H, Cho M (2003) J Chem Phys 118:3491
26. Ham S, Cho M (2003) J Chem Phys 118:6915