Genome-wide identification of genes expressed in Arabidopsis pistils specifically along the path of pollen tube growth

Plant Physiology

Volumn 138, Issue 2, 2005, Pages 977-989

  Tung, Chih Wei ^a   Dwyer, Kathleen G ^b   Nasrallah, Mikhail E ^a   Nasrallah, June B ^a  

^a Department of Obstetrics Gynecology   (United States)

^b UNIVERSITY OF SCRANTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; GENES; GENETIC ENGINEERING; GROWTH KINETICS;

ARABIDOPSIS THALIANA; CELLULAR TOXIN; EPIDERMAL CELLS;

PLANTS (BOTANY);

CELLS; GENES; GENETIC ENGINEERING; GROWTH; PLANTS;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ARABIDOPSIS; ARTICLE; EXTRACELLULAR MATRIX; FLOWER; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; MUTATION; PLANT EPIDERMIS; REPRODUCIBILITY; SIGNAL TRANSDUCTION;

ARABIDOPSIS; EXTRACELLULAR MATRIX; FLOWERS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; MUTATION; PLANT EPIDERMIS; REPRODUCIBILITY OF RESULTS; SIGNAL TRANSDUCTION; TRANSCRIPTION, GENETIC;

EID: 26944477437     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.060558     Document Type: Review

References (66)

1. Arabidopis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815
2. Birnbaum K, Shasha DE, Wang JY, Jung JW, Lambert GM, Galbraith DW, Benfey PN (2003) A gene expression map of the Arabidopsis root. Science 302: 1956-1960
3. Bower MS, Matias DD, Fernandes-Carvalho E, Mazzurco M, Gu T, Rothstein SJ, Goring DR (1996) Two members of the thioredoxin-h family interact with the kinase domain of a Brassica S locus receptor kinase. Plant Cell 8: 1641-1650
4. Bowman JL, Baum SF, Eshed Y, Putterill J, Alvarez J (1999) Molecular genetics of gynoecium development in Arabidopsis. Curr Top Dev Biol 45: 155-205
5. Brownleader MD, Hopkins J, Mobasheri A, Dey PM, Jackson P, Trevan M (2000) Role of extensin peroxidase in tomato (Lycopersicon esculentum Mill.) seedling growth. Planta 210: 668-676
6. Bradley DJ, Kjellbom P, Lamb CJ (1992) Elicitor- and wound- induced oxidative cross-linking of a proline-rich plant cell wall protein: a novel, rapid, defense response. Cell 70: 21-30
7. Brandt S, Kehr J, Walz C, Imlau A, Willmitzer L, Fisahn J (1999) A rapid method for detection of plant gene transcripts from single epidermal, mesophyll and companion cells of intact leaves. Plant J 20: 245-250
8. Day CD, Irish VF (1997) Cell ablation and the analysis of plant development. Trends Plant Sci 2: 106-111
9. Delp G, Palva ET (1999) A novel flower-specific Arabidopsis gene related to both pathogen-induced and developmentally regulated plant β-1,3-glucanase genes. Plant Mol Biol 39: 565-575
10. de Oliveira DE, Franco LO, Simoens C, Seurinck J, Coppieters J, Botterman J, Van Montagu M (1993) Inflorescence-specific genes from Arabidopsis thaliana encoding glycine-rich proteins. Plant J 3: 495-507
11. Dwyer KG, Lalonde BA, Nasrallah JB, Nasrallah ME (1992) Structure and expression of AtS1, and Arabidopsis thaliana gene homologous to the S-locus related genes of Brassica. Mol Gen Genet 231: 442-448
12. Elleman CJ, Dickinson HG (1999) Commonalities between pollen/stigma and host/pathogen interactions: calcium accumulation during stigmatic penetration by Brassica oleracea pollen tubes. Sex Plant Reprod 12: 194-202
13. Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300: 1005-1016
14. Galen C, Plowright RC (1987) Testing the accuracy of using peroxidase activity to indicate stigma receptivity. Can J Bot 65: 107-111
15. Gaude T, Dumas C (1986) Organization of stigma surface components in Brassica: a cytochemical study. J Cell Sci 82: 203-216
16. Gross-Hardt R, Laux T (2003) Stem cell regulation in the shoot meristem. J Cell Sci 116: 1659-1666
17. Gu T, Mazzurco M, Sulaman W, Matias DD, Goring DR (1998) Binding of an arm repeat protein to the kinase domain of the S-locus receptor kinase. Proc Natl Acad Sci USA 95: 382-387
18. Hennig L, Gruissem W, Grossniklaus U, Kohler C (2004) Transcriptional programs of early reproductive stages in Arabidopsis. Plant Physiol 135: 1-11
19. Heslop-Harrison J, Heslop-Harrison Y (1975) Enzymic removal of the proteinaceous pellicle of the stigmatic papillae prevents pollen tube entry in the Caryophyllaceae. Ann Bot (Lond) 39: 163-165
20. Heslop-Harrison Y, Shivanna KR (1977) The receptive surface of the angiosperm stigma. Ann Bot (Lond) 41: 1233-1258
21. Hiscock SJ, Bown D, Gurr SJ, Dickinson HG (2002) Serine esterases are required for pollen tube penetration of the stigma in Brassica. Sex Plant Reprod 15: 65-74
22. Jackson PAP, Galinha CIR, Pereira CS, Fortunato A, Soares NC, Amancio SBQ, Ricardo CPP (2001) Rapid deposition of extensin during the elicitation of grapevine callus cultures is specifically catalyzed by a 40-kilodalton peroxidase. Plant Physiol 127: 1065-1076
23. Kachroo A, Nasrallah ME, Nasrallah JB (2002) Self-incompatibility in the Brassicaceae: receptor-ligand signaling and cell-to-cell communication. Plant Cell (Suppl) 14: S227-S238
24. Kader J-C (1996) Lipid-transfer proteins in plants. Annu Rev Plant Physiol Plant Mol Biol 47: 627-654
25. Kandasamy MK, Nasrallah JB, Nasrallah ME (1994) Pollen-pistil interactions and developmental regulation of pollen tube growth in Arabidopsis. Development 12: 3405-3418
26. Kang Y, Nasrallah JB (2001) Use of genetically ablated stigmas for the isolation of genes expressed specifically in the stigma epidermis. Sex Plant Reprod 14: 85-94
27. Karrer EE, Lincoln JE, Hogenhout S, Bennett AB, Bostock RM, Martineau B, Lucas WJ, Gilchrist DG, Alexander D (1995) In situ isolation of mRNA from individual plant cells: creation of cell-specific cDNA libraries. Proc Natl Acad Sci USA 92: 3814-3818
28. Kerk NM, Ceserani T, Tausta L, Susses IM, Nelson TM (2003) Laser capture microdissection of cells from plant tissues. Plant Physiol 132: 27-35
29. Kim S, Mollet J-D, Dong J, Zhang K, Park S-Y, Lord EM (2003) Chemocyanin, a small basic protein from the lily stigma, induces pollen tube chemotropism. Proc Natl Acad Sci USA 100: 16125-16130
30. Klur S, Toy K, Williams MP, Certa U (2004) Evaluation of procedures for amplification of small-size samples for hybridization on microarrays. Genomics 83: 503-517
31. Kononowicz AK, Nelson DE, Singh NK, Hasegawa PM, Bressan RA (1992) Regulation of the osmotin gene promoter. Plant Cell 4: 513-524
32. Kusaba M, Dwyer K, Hendershot J, Nasrallah JB, Nasrallah ME (2001) Self-incompatibility in the genus Arabidopsis: characterization of the S locus in the outcrossing A. lyrata and its autogamous relative A. thaliana. Plant Cell 13: 627-643
33. Lan L, Chen W, Lai Y, Suo J, Kong Z, Li C, Lu Y, Zhang Y, Zhao X, Zhang X, et al (2004) Monitoring of gene expression profiles and isolation of candidate genes involved in pollination and fertilization in rice (Oryza sativa L.) with a 10K cDNA microarray. Plant Mol Biol 54: 471-487
34. Lolle S, Cheung AY (1993) Promiscuous germination and growth of wild type pollen from Arabidopsis and related species on the shoot of the Arabidopsis mutant, fiddlehead Dev Biol 155: 250-258
35. Majewska-Sawka A, Nothnagel EA (2000) The multiple roles of arabino-galactan proteins in plant development. Plant Physiol 122: 3-9
36. Mariani C, De Beuckeleer M, Truettner J, Leemans J, Goldberg RB (1990) Induction of male sterility in plants by a chimaeric ribonuclease gene. Nature 347: 737-741
37. Murase K, Shiba H, Iwano M, Che F-S, Watanabe M, Isogai A, Takayama S (2004) A membrane-anchored protein kinase involved in Brassica self-incompatibility signaling. Science 303: 1516-1519
38. Nasrallah ME, Liu P, Nasrallah JB (2002) Generation of self-incompatible Arabidopsis thaliana by transfer of two S locus genes from A. lyrata. Science 297: 247-249
39. Nasrallah ME, Liu P, Sherman-Broyles S, Boggs NA, Nasrallah JB (2004) Natural variation in expression of self-incompatibility in Arabidopsis thaliana: implications for the evolution of selfing. Proc Natl Acad Sci USA 101: 16070-16074
40. Palanivelu R, Brass L, Edlund AF, Preuss D (2003) Pollen tube growth and guidance is regulated by POP2, an Arabidopsis gene that controls GABA levels. Cell 114: 47-59
41. Park S-Y, Jauh G-Y, Mollet J-C, Eckard KJ, Nothnagel EA, Walling LL, Lord EM (2000) A lipid transfer-like protein is necessary for lily pollen tube adhesion to an in vitro stylar matrix. Plant Cell 12: 151-163
42. Pearce G, Ryan CA (2003) Systemic signaling in tomato plants for defense against herbivores. Isolation and characterization of three novel defense-signaling glycopeptide hormones coded in a single precursor gene. J Biol Chem 278: 30044-30050
43. Robert L, Allard S, Gerster JL, Cass L, Simmonds J (1994) Molecular analysis of two Brassica napus genes expressed in the stigma. Plant Mol Biol 26: 1217-1222
44. Sanchez AM, Bosch M, Bots M, Nieuwland J, Feron R, Mariani C (2004) Pistil factors controlling pollination. Plant Cell 16: S98-S106
45. Schnurr J, Shockey J, Browse J (2004) The acyl-CoA synthetase encoded by LACS2 is essential for normal cuticle development in Arabidopsis. Plant Cell 16: 629-642
46. Schopfer P (2001) Hydroxyl radical-induced cell wall loosening in vitro and in vivo: implications for the control of elongation growth. Plant J 28: 679-688
47. Schuler MA, Werck-Reichhart D (2003) Functional genomics of P450s. Annu Rev Plant Biol 54: 629-667
48. Scutt CP, Vinauger-Douard M, Fourquin C, Ailhas J, Kuno N, Uchida K, Gaude T, Furuya M, Dumas C (2003) The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidospis gynoecium. Plant Physiol 132: 653-665
49. Shiu S-H, Bleecker AB (2003) Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis. Plant Physiol 132: 530-543
50. Sieber P, Schorderet M, Ryser U, Buchala A, Kolattukudy P, Metraus J-P, Nawrath C (2000) Transgenic Arabidopsis plants expressing a fungal cutinse show alternations in the structure and properties of the cuticle and postgenital organ fusions. Plant Cell 12: 721-737
51. Stead AD, Roberts IN, Dickinson HG (1980) Pollen-stigma interaction in Brassica oleracea: the role of stigmatic proteins in pollen grain adhesion. J Cell Sci 42: 417-423
52. Stone SL, Arnoldo M, Goring DR (1999) A breakdown of Brassica self-incompatibility in ARC1 antisense transgenic plants. Science 286: 1729-1731
53. Swidzinski JA, Sweetlove LJ, Leaver CJ (2002) A custom microarray analysis of gene expression during programmed cell death in Arabidopsis thaliana. Plant J 30: 431-446
54. Takayama S, Shimosato H, Shiba H, Funato M, Che FS, Watanabe M, Iwano M, Isogai A (2001) Direct ligand-receptor complex interaction controls Brassica self-incompatibility Nature 413: 534-538
55. Tang W, Kelley D, Ezcurra I, Cotter R, McCormick S (2004) LeSTIG1, an extracellular binding partner for the pollen receptor kinases LePRK1 and LePRK2, promotes pollen tube growth in vitro. Plant J 39: 343-353
56. Thorsness MK, Kandasamy MK, Nasrallah ME, Nasrallah JB (1993) Genetic ablation of floral cells in Arabidopsis. Plant Cell 5: 253-261
57. Vanoosthuyse V, Tichtinsky G, Dumas C, Gaude T, Cock JM (2003) Interaction of calmodulin, a sorting nexin and kinase-associated protein phosphate with the Brassica oleracea S locus receptor kinase. Plant Physiol 133: 919-929
58. Wellesen K, Durst F, Pinot F, Benveniste I, Nettesheim K, Wisman E, Steiner-Lange S, Saedler H, Yephremov A (2001) Functional analysis of the LACERATA gene of Arabidopsis provides evidence for different roles of fatty acid ω-hydroxylation in development. Proc Natl Acad Sci USA 98: 9694-9699
59. Wellmer F, Riechmann JL, Alves-Ferreira M, Meyerowitiz EM (2004) Genome-wide analysis of spatial gene expression in Arabidopsis flowers. Plant Cell 16: 1314-1326
60. Williams EJB, Bowles DJ (2004) Coexpression of neighboring genes in the genome of Arabidopsis. Genome Res 14: 1060-1070
61. Wu H-M, Wong E, Ogdahl J, Cheung AY (2000) A pollen tube growth-promoting arabinogalactan protein from Nicotians alata is similar to the tobacco TTS protein. Plant J 22: 165-176
62. Zachgo S, Perbal M-S, Saedler H, Schwarz-Sommer Z (2000) In situ analysis of RNA and protein expression in whole mounts facilitates detection of floral gene expression dynamics. Plant J 23: 697-702
63. Zhu T, Budworth P, Han B, Brown D, Chang H-S, Zou G, Wang X (2001) Toward elucidating the global gene expression patterns of developing Arabidopsis: parallel analysis of 8300 genes by a high-density oligonucleotide probe array. Plant Physiol Biochem 39: 221-242
64. Zik M, Irish VF (2003) Global identification of target genes regulated by APETALA3 and PISTlLLATA floral homeotic gene action. Plant Cell 15: 207-222
65. Zinkl GM, Zwiebel Bl, Grier DG, Preuss D (1999) Pollen-stigma adhesion in Arabidopsis: a species-specific interaction mediated by lipophilic molecules in the pollen exine. Development 126: 5431-5440
66. Zipfel C, Robatzek S, Navarro L, Oakeley EJ, Jones JD, Felix G, Boller T (2004) Bacterial disease resistance in Arabidopsis through flagellin perception. Nature 428: 764-767