A custom microarray analysis of gene expression during programmed cell death in Arabidopsis thaliana

Plant Journal

Volumn 30, Issue 4, 2002, Pages 431-446

  Swidzinski, Jodi A ^a   Sweetlove, Lee J ^a   Leaver, Christopher J ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

Arabidopsis; Heat; Microarray; Mitochondria; Programmed Cell Death; Senescence

Indexed keywords

BIOMARKERS; DNA; ENZYMES; GENES; HEAT TREATMENT;

CELLULAR SUICIDE;

PLANT CELL CULTURE;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA;

ARABIDOPSIS PROTEIN; ATHSR2 PROTEIN, ARABIDOPSIS; CELL CYCLE PROTEIN; HOMEODOMAIN PROTEIN; KNAT2 PROTEIN, ARABIDOPSIS; PLANT DNA; PLANT RNA; SRG3 PROTEIN, ARABIDOPSIS; TUBULIN; VEGETABLE PROTEIN;

APOPTOSIS; ARABIDOPSIS; ARTICLE; CELL AGING; CULTURE TECHNIQUE; CYTOLOGY; DNA MICROARRAY; GENE EXPRESSION REGULATION; GENETICS; HEAT; METABOLISM; METHODOLOGY; SIGNAL TRANSDUCTION; TIME;

APOPTOSIS; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL AGING; CELL CULTURE TECHNIQUES; CELL CYCLE PROTEINS; DNA, PLANT; GENE EXPRESSION REGULATION, PLANT; HEAT; HOMEODOMAIN PROTEINS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PLANT PROTEINS; RNA, PLANT; SIGNAL TRANSDUCTION; TIME FACTORS; TUBULIN;

EID: 0036015056     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2002.01301.x     Document Type: Article

References (65)

1. Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays
2. The domains of death: Evolution of the apoptosis machinery
3. Translocation of cytochrome c from the mitochondria to the cytosol occurs during heat-induced programmed cell death in cucumber plants
4. The PET1-CMS mitochondrial mutation in sunflower is associated with premature programmed cell death and cytochrome C release
5. Isolation of cDNA clones for genes that are expressed during leaf senescence in Brassica napus: Identification of a gene encoding a senescence-specific metallothionein-like protein
6. Novel molecular markers for late phases of growth cycle of Arabidopsis thaliana cell-suspension cultures are expressed during organ senescence
7. An orchestrated gene expression component of neuronal programmed cell death revealed by cDNA array analysis
8. NO way back: Nitric oxide and programmed cell death in Arabidopsis thaliana suspension cultures
9. UV-C radiation induces apoptotic-like changes in Arabidopsis thaliana
10. A matrix metalloproteinase gene is expressed at the boundary of senescence and programmed cell death in cucumber
11. Generation of active oxygen in elicited cells of Arabidopsis thaliana is mediated by a NADPH oxidase-like enzyme
12. Regulation of the Arabidopsis transcriptome by oxidative stress
13. Hydrogen peroxide-induced gene expression in Arabidopsis thaliana
14. Harpin and hydrogen peroxide both initiate programmed cell death but have differential effects on defence gene expression in Arabidopsis suspension cultures
15. Hydrogen peroxide from the oxidative burst is neither necessary nor sufficient for hypersensitive cell death induction, phenylalanine ammonia lyase stimulation, salicylic acid accumulation, or scopoletin consumption in cultured tobacco cells treated with elicitin
16. Isolation and analysis of cDNAs encoding tomato cysteine proteases expressed during leaf senescence
17. Enzymes that scavenge reactive oxygen species are down-regulated prior to gibberellic acid-induced programmed cell death in barley aleurone
18. Making sense of senescence - Molecular genetic regulation and manipulation of leaf senescence
19. The active oxygen response of cell suspensions to incompatible bacteria is not sufficient to cause hypersensitive cell death
20. Tracheary element differentiation uses a novel mechanism coordinating programmed cell death and secondary cell wall synthesis
21. Hypersensitive response-related death
22. Programmed cell death in development and defense
23. A novel plant glutathione S-transferase/peroxidase suppresses bax lethality in yeast
24. Gene expression profiles during the initial phase of salt stress in rice
25. A cDNA encoding a putative SPF1-type DNA-binding protein from cucumber
26. Superoxide dismutase in Arabidopsis: An eclectic enzyme family with disparate regulation and protein localization
27. Chromatin fragmentation associated with apoptotic changes in tobacco cells exposed to cold stress
28. Activation of the potato plant uncoupling mitochondrial protein inhibits reactive oxygen species generation by the respiratory chain
29. Identification of new early markers of the hypersensitive response in Arabidopsis thaliana
30. Bax-induced cell death in tobacco is similar to the hypersensitive response
31. Calcium-mediated apoptosis in a plant hypersensitive disease resistance response
32. 2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response
33. A knotted 1-like homeobox gene in Arabidopsis is expressed in the vegetative meristem and dramatically alters leaf morphology when overexpressed in transgenic plants
34. Two classes of plant cDNA clones differentially complement yeast calcineurin mutants and increase salt tolerance of wild-type yeast
35. Mitochondrial proliferation and paradoxical membrane depolarization during terminal differentiation and apoptosis in a human colon carcinoma line
36. Oxidative stimulation of glutathione synthesis in Arabidopsis thaliana suspension cultures
37. Programmed cell death in cell cultures
38. A programmed cell death pathway activated in carrot cells cultured at low cell density
39. Animal cell-death suppressors Bcl-x (L) and Ced-9 inhibit cell death in tobacco plants
40. Transgenic tobacco plants with reduced capability to detoxify reactive oxygen intermediates are hyperresponsive to pathogen infection
41. Identification, characterization, and purification of a tobacco endonuclease activity induced upon hypersensitive cell death
42. Correlation of rapid cell death with metabolic changes in fungus-infected, cultured parsley cells
43. Ascorbate and glutathione: Keeping active oxygen under control
44. A senescence-associated gene of Arabidopsis thaliana is distinctively regulated during natural and artificially induced leaf senescence
45. Leaf senescence is delayed in tobacco plants expressing the maize homeobox gene knotted 1 under the control of a senescence-activated promoter
46. Programmed cell death in plants
47. New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis
48. Markers for hypersensitive response and senescence show distinct patterns of expression
49. Caspases and programmed cell death in the hypersensitive response of plants to pathogens
50. Molecular aspects of leaf senescence
51. Ozone: A tool for probing programmed cell death in plants
52. Cytochrome c: Can't live with it - Can't live without it
53. Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis
54. Dead cells do tell tales
55. Towards Arabidopsis genome analysis: Monitoring expression profiles of 1400 genes using cDNA microarrays
56. AtBI-1, a plant homologue of Bax Inhibitor-1, suppresses Bax- induced cell death in yeast and is rapidly upregulated during wounding and pathogen challenge
57. Communicating with calcium
58. Coordinated plant defense responses in Arabidopsis revealed by microarray analysis
59. The involvement of cysteine proteases and protease inhibitor genes in the regulation of programmed cell death in plants
60. Cytochrome c and caspase activation during menadione-induced apoptosis in plants
61. Bcl-xL prevents cell death following growth factor withdrawal by facilitating mitochondrial ATP/ADP exchange
62. Cell death in development
63. Gene microarray identification of redox and mitochondrial elements that control resistance or sensitivity to apoptosis
64. Evidence for programmed cell death during leaf senescence in plants
65. Apoptosis of mouse liver nuclei induced in the cytosol of carrot cells