Is spatial distribution of the HIV-1-resistant CCR5Δ32 allele formed by ecological factors?

Journal of Physiological Anthropology and Applied Human Science

Volumn 24, Issue 4, 2005, Pages 375-382

  Balanovsky, Oleg ^a   Pocheshkhova, Elvira ^b   Pshenichnov, Andrey ^a   Solovieva, Daria ^a   Kuznetsova, Marina ^a   Voronko, Olga ^a   Churnosov, Michail ^c   Tegako, Olga ^d   Atramentova, Lubov ^e   Lavryashina, Maria ^f   Evseeva, Irina ^g   Borinska, Svetlana ^h   Boldyreva, Margarita ⁱ   Dubova, Nadezhda ^j   Balanovska, Elena ^a  

^a RESEARCH CENTRE FOR MEDICAL GENETICS   (Russian Federation)

^b KUBAN STATE MEDICAL UNIVERSITY   (Russian Federation)

^c BELGOROD STATE UNIVERSITY   (Russian Federation)

^d K Krapiva Institute of Arts Ethnography and Folklore   (Belarus)

^e V N KARAZIN KHARKIV NATIONAL UNIVERSITY   (Ukraine)

^f KEMEROVO STATE UNIVERSITY   (Russian Federation)

^g NORTHERN STATE MEDICAL UNIVERSITY   (Russian Federation)

^h VAVILOV INSTITUTE OF GENERAL GENETICS   (Russian Federation)

ⁱ INSTITUTE OF IMMUNOLOGY   (Russian Federation)

^j INSTITUTE OF ETHNOLOGY AND ANTHROPOLOGY   (Russian Federation)

more..

Author keywords

CCR5; Climate; Frequency map; Geographic distribution; HIV; Selection

Indexed keywords

CHEMOKINE RECEPTOR CCR5;

ASIA; COMPARATIVE STUDY; CONFERENCE PAPER; DEMOGRAPHY; ENVIRONMENT; EUROPE; GENE FREQUENCY; GENETIC DATABASE; GENETIC PREDISPOSITION; GENETICS; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; MIGRATION; MUTATION; POPULATION GENETICS;

ASIA; DATABASES, GENETIC; DEMOGRAPHY; EMIGRATION AND IMMIGRATION; ENVIRONMENT; EUROPE; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; GENETICS, POPULATION; HIV INFECTIONS; HIV-1; HUMANS; MUTATION; RECEPTORS, CCR5;

EID: 26844540495     PISSN: 13453475     EISSN: None     Source Type: Journal    
DOI: 10.2114/jpa.24.375     Document Type: Conference Paper

References (30)

1. Balanovska EV, Nurbaev SD, Rychkov YuG (1994a) Computer technology of the genogeographic study of the gene pool. I. Statistical information from the genogeographic map. Genetika 30: 951-965 [In Russian]
2. Balanovska EV, Nurbaev SD, Rychkov YuG (1994b) Computer technology for genetic-geographical study of the gene pool. II. Statistical transformation of maps. Genetika 30: 1538-1555 [In Russian]
3. Balanovska EV, Nurbaev SD (1995) Computer technology of gene geographic analysis of a gene pool: III. Derivation of trend surfaces. Genetika 31: 536-559 [In Russian]
4. Balanovska EV, Rychkov YuG (1997) Human gene pool at the stages of settling the oicumene: adaptive evolution and gene geography. In Man is settling the Earth. Global dispersal of hominids. Moscow, 228-297 [In Russian]
5. Balanovsky OP, Shadrina MI, Limborska SA, Balanovska EV (2001) Global distribution of the CCR5Δ32 mutation, causing resistance to HIV-1 infection: does it depend on climate, or history, or diseases? (Materials of the first international young medics' conference "Young doctors on the threshold of the third millennium", Yerevan, Armenia) [In Russian]
6. Berlandt AM (1986) The image of space: map and information. Mysl', Moscow [In Russian]
7. Bunak VV (ed.) (1965) Origin and ethnic history of Russian people: anthropological data. Nauka, Moscow, 414 [In Russian]
8. Cavalli-Sforza LL, Menozzi P, Piazza A (1994) History and Geography of Human Genes. Princeton University Press, Princeton, 1069
9. Dean M, Carrington M, Winkler C, Huttley GA, Smith MW, Allikmets R, Goedert JJ, Buchbinder SP, Vittinghott E, Gomperts E, Donfield S, Vlahov D, Kaslow R, Saah A, Rinaldo C, Detels R, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study, O'Brien SJ (1996) Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CCR5 structural gene. Science 273: 1856-1862
10. Dragic T, Litwin V, Allaway GP, Martin SR, Huang Y, Nagashima KA, Cayanan C, Maddon PJ, Koup RA, Moore JP, Paxton WA (1996) HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC-CKR-5. Nature 381: 667-673
11. Galvani AP, Novembre J (2005) The evolutionary history of the CCR5-D32 HIV-resistance mutation. Microbes and Infection 7: 302-309
12. Galvani AP, Slatkin MW (2003) Evaluating plague and smallpox as historical selective pressures for the CCR5Δ32HIV-resistance allele. Proc Natl Acad Sci USA 100: 15276-15279
13. Grand Soviet World Atlas (1937) 1 i 2 kartograficheskie fabriki GUGSK NKVD USSR vol. 1, Moscow [In Russian]
14. Koshel SM, Musin OR (1991) Digital models for studying environmental change. Proc Int Symp on Environmental Change and GIS (INSEG'91). Asashikama Japan 2: 321-327
15. Libert F, Cochaux P, Beckman G, Samson M, Aksenova M, Cao A, Czeizel A, Claustres M, Rua C, Ferrari M, Ferrec C, Glover G, Grinde B, Guran S, Kucinskas V, Lavinha J, Mercier B, Ogur G, Peltonen L, Rosatelli C, Schwartz M, Spitsyn V, Timar L, Beckman L, Parmentier M, Vassart G (1998) The D ccr5 mutation conferring protection against HIV-1 in Caucasian populations has a single and recent origin in Northeastern Europe. Hum Mol Genet 7: 399-406
16. Limborska SA, Balanovsky OP, Balanovskaya EV, Slominsky PA, Schadrina MI, Livshits LA, Kravchenko SA, Pampuha VM, Khusnutdinova EK, Spitsyn VA (2002) Analysis of CCR5Δ32 Geographic Distribution and Its Correlation with Some Climatic and Geographic Factors. Hum Hered 53: 49-54
17. Lucotte G, Dieterlen F (2003) More about the Viking hypothesis of origin of the Δ32 mutation in the CCR5 gene conferring resistance to HIV-1 infection. Infect Genet Evol 3: 293-295
18. Lucotte G (2001) Distribution of the CCR5 gene 32-bp deletion in West Europe. A hypothesis about the possible dispersion of the mutation by the Vikings in historical times. Hum Immunol 62: 933-936
19. Martinson JJ, Chapman NH, Rees DC, Liu YT, Clegg JB (1997) Global distribution of the CCR5 gene 32-basepair deletion. Nat Genet 16: 100-103
20. Martinson JJ, Hong L, Karanicolas R, Moore JP, Kostrikis LG (2000) Global distribution of the CCR2-64I/CCR5-59653T HIV-1 disease-protective haplotype. AIDS 14: 483-489
21. Mecsas J, Franklin G, Kuziel WA, Brubaker RR, Falkow S, Mosier DE (2004) Evolutionary genetics: CCR5 mutation and plague protection. Nature 12(427-6975): 606
22. Nurbaev SD, Balanovskaia EV (1998) Computer technology for genogenographic study of the gene pool. V Evaluation of the reliability of maps. Genetika 34: 825-838 [In Russian]
23. O'Brien SJ, Moore JP (2000) The effect of genetic variation in chemokines and their receptors on HIV transmission and progression to AIDS. Immunol Rev 177: 99-111
24. Osier MV, Cheung KH, Kidd JR, Pakstis AJ, Miller PL, Kidd KK (2002) ALFRED: an allele frequency database for Anthropology. Am J Phys Anthropol 119: 77-83
25. Rychkov YuG, Balanovska EV (1992) Gene pool and gene geography of the population of USSR. Genetika 28: 52-75 [In Russian]
26. Samson M, Libert F, Doranz BJ, Rucker J, Liesnard C, Farber CM, Saragosti S, Lapoumeroulie C, Cognaux J, Forceille C, Muyldermans G, Verhofstede C, Burtonboy G, Georges M, Imai T, Rana S, Yi Y, Smyth RJ, Collman RG, Doms RW, Vassart G, Parmentier M (1996) Resistance to HIV-1 infection in Caucasian individuals bearing mutant alleles of the CCR-5 chemokine receptor gene. Nature 382: 722-725
27. Serbenyk SN, Koshel SM, Musin OR (1990) Methods for modeling the geofields from data in irregular points. Geodesy and Cartography 11: 31-35 [In Russian]
28. Stephens JC, Reich DE, Goldstein DB, Shin HD, Smith MW, Carrington M, Winkler C, Huttley G, Allikmets R, Schriml L, Gerrard B, Malasky M, Ramos MD, Morlot S, Tzetis M, Oddoux C, Giovine FS, Nasioulas G, Chandler D, Aseev M, Hanson M, Kalaydjieva L, Glavac D, Gasparini P, Kanavakis E, Claustres M, Kambouris M, Ostrer H, Duff G, Baranov V, Sibul H, Metspalu A, Goldman D, Martin N, Duffy D, Schmidtke J, Estivill X, O'Brien SJ, Dean M (1998) Dating the origin of the CCR5-D32 AIDS-resistance allele by the coalescence of haplotypes. Am J Hum Genet 62: 1507-1515
29. Zimmerman PA, Buckler-White A, Alkhatib G, Spalding T, Kubofcik J, Combadiere C, Weissman D, Cohen O, Rubbert A, Lam G, Vaccarezza M, Kennedy PE, Kumaraswami V, Giorgi JV, Detels R, Hunter J, Chopek M, Berger EA, Fauci AS, Nutman TB, Murphy PM (1997) Inherited resistance to HIV-1 conferred by an inactivating mutation in CC chemokine receptor 5: studies in populations with contrasting clinical phenotypes, defined racial background, and quantified risk. Mol Med J 3: 23-36
30. Yudin NS, Vinogradov SV, Potapova TA, Naykova TM, Sitnikova VV, Kulikov IV, Khasnulin VI, Konchuk C, Vloschinskii PE, Ivanov SV, Kobzev VF, Romaschenko AG, Voevoda MI (1998) Distribution of CCR5Δ32 gene deletion across the Russian part of Eurasia. Hum Genet 102: 695-698