In vitro interactions between the two mitochondrial membrane proteins VDAC and cytochrome c oxidase

Biochemistry

Volumn 44, Issue 39, 2005, Pages 13192-13201

  Roman, Inge ^a   Figys, Jurgen ^a,b   Steurs, Griet ^a,b   Zizi, Martin ^a,b  

^a VRIJE UNIVERSITEIT BRUSSEL   (Belgium)

^b Department of Defense   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; MECHANICAL PERMEABILITY; MEMBRANES; OPTIMIZATION; YEAST;

ISOFORMS; MITOCHONDRIA; OXIDASE;

PROTEINS;

CYTOCHROME C OXIDASE; HOLOENZYME; MEMBRANE PROTEIN; VOLTAGE GATED CHANNEL FORMING PROTEIN;

AEROBIC METABOLISM; AMINO ACID SEQUENCE; APOPTOSIS; ARTICLE; DNA LIBRARY; OXIDATION; PHAGE DISPLAY; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION;

ELECTRON TRANSPORT COMPLEX IV; GENE LIBRARY; HUMANS; LIVER; MITOCHONDRIAL PROTEINS; PROTEIN BINDING; PROTEIN ISOFORMS; VOLTAGE-DEPENDENT ANION CHANNEL 1;

EID: 25444518185     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi050674s     Document Type: Article

References (55)

1. Rostovtseva, T., and Colombini, M. (1996) ATP flux is controlled by a voltage-gated channel from the mitochondrial outer membrane, J. Biol. Chem. 271, 28006-28008.
2. Colombini, M., Blachly-Dyson, E., and Forte, M. (1996) VDAC, a channel in the outer mitochondrial membrane, Ion Channels 4, 169-202.
3. Colombini, M. (2004) VDAC: the channel at the interface between mitochondria and the cytosol, Mol. Cell. Biochem. 256-257, 107-115.
4. Desagher, S., and Martinou, J. C. (2000) Mitochondria as the central control point of apoptosis, Trends Cell Biol. 10, 369-377.
5. Vander Heiden, M. G., Li, X. X., Gottleib, E., Hill, R. B., Thompson, C. B., and Colombini, M. (2001) Bcl-xL promotes the open configuration of the voltage-dependent anion channel and metabolite passage through the outer mitochondrial membrane, J. Biol. Chem. 276, 19414-19419.
6. Crompton, M. (1999) The mitochondrial permeability transition pore and its role in the cell death, Biochem. J. 341, 233-249.
7. Zamzami, N., and Kroemer, G. (2001) The mitochondrion in apoptosis: how Pandora's box opens, Nat. Rev. Mol. Cell Biol. 2, 67-71.
8. Cesura, A. M., Pinard, E., Schubenel, R., Goetschy, V., Friedlein, A., Langen, H., Polcic, P., Forte, M. A., Bernardi, P., and Kemp, J. A. (2003) The voltage-dependent anion channel is the target for a new class of inhibitors of the mitochondrial permeability transition pore, J. Biol. Chem. 278, 49812-49818.
9. Linden, M., and Karlsson, G. (1996) Identification of porin as a binding site for MAP2, Biochem. Biophys. Res. Commun. 218, 833-836.
10. Kusano, H., Shimizu, S., Koya, R. C., Fujita, H., Kamada, S., Kuzumaki, N., and Tsujimoto, Y. (2000) Human gelsolin prevents apoptosis by inhibiting apoptotic mitochondrial changes via closing VDAC, Oncogene 19, 4807-4814.
11. Xu, X., Forbes, J. G., and Colombini, M. (2001) Actin modulates the gating of Neurospora crassa VDAC, J. Membr. Biol. 180, 73-81.
12. Gonzalez-Gronow, M., Kalfa, T., Johnson, C. E., Gawdi, G., and Pizzo, S. V. (2003) The voltage-dependent anion channel is a receptor for plasminogen kringle 5 on human endothelial cells, J. Biol. Chem. 278, 27312-27318.
13. Sun, J., and Liao, J. K. (2002) Functional interaction of endothelial nitric oxide synthase with a voltage-dependent anion channel, Proc. Natl. Acad. Sci. U.S.A. 99, 13108-13113.
14. Xu, X., and Colombini, M. (1996) Self-catalyzed insertion of proteins into phospholipid membranes, J. Biol. Chem. 271, 23675-23682.
15. Zizi, M., Thomas, L., Blachly-Dyson, E., Forte, M., and Colombini, M. (1995) Oriented channel insertion reveals the motion of a transmembrane beta strand during voltage gating of VDAC, J. Membr. Biol. 144, 121-129.
16. De Pinto, V., Prezioso, G., and Palmieri, F. (1987) A simple and rapid method for the purification of the mitochondrial porin from mammalian tissues, Biochim. Biophys. Acta 905, 499-502.
17. Palmieri, F., and De Pinto, V. (1989) Purification and properties of the voltage-dependent anion channel of the outer mitochondrial membrane, J. Bioenerg. Biomembr. 21, 417-425.
18. Colombini, M. (1979) A candidate for the permeability pathway of the outer mitochondrial membrane, Nature 279, 643-645.
19. Blachly-Dyson, E., Peng, S., Colombini, M., and Forte, M. (1990) Selectivity changes in site-directed mutants of the VDAC ion channel: structural implications, Science 247, 1233-1236.
20. Wunder, U. R., and Colombini, M. (1991) Patch clamping VDAC in liposomes containing whole mitochondrial membranes, J. Membr. Biol. 123, 83-91.
21. Elkeles, A., Breiman, A., and Zizi, M. (1997) Functional differences among wheat voltage-dependent anion channel (VDAC) isoforms expressed in yeast, J. Biol. Chem. 272, 6252-6260.
22. Cooper, M. A., Hansson, A., Lofas, S., and Williams, D. H. (2000) A vesicle capture sensor chip for kinetic analysis of interactions with membrane-bound receptors, Anal. Biochem. 277, 196-205.
23. Erb, E. M., Chen, X., Allen, S., Roberts, C. J., Tendler, S. J., Davies, M. C., and Forsen, S. (2000) Characterization of the surfaces generated by liposome binding to the modified dextran matrix of a surface plasmon resonance sensor chip, Anal. Biochem. 280, 29-35.
24. Lasonder, E., Schellekens, G. A., and Welling, G. W. (1994) A fast and sensitive method for the evaluation of binding of phage clones selected from a surface displayed library, Nucleic Acids Res. 22, 545-546.
25. Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F., Schreier, P. H., Smith, A. J., Staden, R., and Young, I. G. (1981) Sequence and organization of the human mitochondrial genome, Nature 290, 457-465.
26. Tsukihara, T., Aoyama, H., Yamashita, E., Tomizaki, T., Yamaguchi, H., Shinzawa-Itoh, K., Nakashima, R., Yaono, R., and Yoshikawa, S. (1996) The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A, Science 272, 1136-1144.
27. Stieglerova, A., Drahota, Z., Ostadal, B., and Houstek, J. (2000) Optimal conditions for determination of cytochrome c oxidase activity in the rat heart, Physiol. Res. 49, 245-250.
28. Sinjorgo, K. M., Durak, I., Dekker, H. L., Edel, C. M., Bieleman, A. H., Back, N. B., Hakvoort, T. B., and Muijsers, A. O. (1987) The effect of detergents on bovine cytochrome c oxidase: a kinetic approach, Biochim. Biophys. Acta 893, 241-250.
29. Blachly-Dyson, E., Song, J., Wolfgang, W. J., Colombini, M., and Forte, M. (1997) Multicopy suppressors of phenotypes resulting from the absence of yeast VDAC encode a VDAC-like protein, Mol. Cell. Biol. 17 (10), 5727-5738.
30. Capaldi, R. A. (1990) Structure and function of cytochrome c oxidase, Annu. Rev. Biochem. 59, 569-596.
31. Cooper, C. E., Nicholls, P., and Freedman, J. A. (1991) Cytochrome c oxidase: structure, function, and membrane topology of the polypeptide subunits, Biochem. Cell Biol. 69, 586-607.
32. Wu, W., Schmidt, T. R., Goodman, M., and Grossman, L. I. (2000) Molecular evolution of cytochrome c oxidase subunit I in primates: is there coevolution between mitochondrial and nuclear genomes?, Mol. Phylogenet. Evol. 17, 294-304.
33. Casadio, R., Jacoboni, I., Messina, A., and De, P. V. (2002) A 3D model of the voltage-dependent anion channel (VDAC), FEBS Lett. 520, 1-7.
34. Song, J., Midson, C., Blanchly-Dyson, E., Forte, M., and Colombini, M. (1998) The topology of VDAC as probed by biotin modification, J. Biol. Chem. 273, 24406-24413.
35. Yu, C., Yu, L., and King, T. E. (1975) Studies on cytochrome oxidase. Interactions of the cytochrome oxidase protein with phospholipids and cytochrome c, J. Biol. Chem. 250, 1383-1392.
36. Speck, S. H., Dye, D., and Margoliash, E. (1984) Single catalytic site model for the oxidation of ferrocytochrome c by mitochondrial cytochrome c oxidase, Proc. Natl. Acad. Sci. U.S.A. 81, 347-351.
37. Garber, E. A., and Margoliash, E. (1990) Interaction of cytochrome c with cytochrome c oxidase: an understanding of the high- to low-affinity transition, Biochim. Biophys. Acta 1015, 279-287.
38. Sinjorgo, K. M., Steinebach, O. M., Dekker, H. L., and Muijsers, A. O. (1986) The effects of pH and ionic strength on cytochrome c oxidase steady-state kinetics reveal a catalytic and a non-catalytic interaction domain for cytochrome c, Biochim. Biophys. Acta 850, 108-115.
39. Shikita, M., Fahey, J. W., Golden, T. R., Holtzclaw, W. D., and Talalay, P. (1999) An unusual case of 'uncompetitive activation' by ascorbic acid: purification and kinetic properties of a myrosinase from Raphanus sativus seedlings, Biochem. J. 341 (Pt 3), 725-732.
40. 2+ sequestration by taurine, Biochem. Pharmacol. 58, 1123-1131.
41. Phillips, M. F., and Mantle, T. J. (1991) The initial-rate kinetics of mouse glutathione S-transferase YfYf. Evidence for an allosteric site for ethacrynic acid, Biochem. J. 275 (Pt 3), 703-709.
42. Blachly-Dyson, E., Zambronicz, E. B., Yu, W. H., Adams, V., McCabe, E. R., Adelman, J., Colombini, M., and Forte, M. (1993) Cloning and functional expression in yeast of two human isoforms of the outer mitochondrial membrane channel, the voltage-dependent anion channel, J. Biol. Chem. 268, 1835-1841.
43. Cheng, E. H., Sheiko, T. V., Fisher, J. K., Craigen, W. J., and Korsmeyer, S. J. (2003) VDAC2 inhibits BAK activation and mitochondrial apoptosis. Science 301, 513-517.
44. Chandra, D., Choy, G., Daniel, P. T., and Tang, D. G. (2005) Bax-dependent regulation of Bak by voltage-dependent anion channel 2, J. Biol. Chem. 280, 19051-19061.
45. Adams, V., Griffin, L., Towbin, J., Gelb, B., Worley, K., and McCabe, E. R. (1991) Porin interaction with hexokinase and glycerol kinase: metabolic microcompartmentation at the outer mitochondrial membrane, Biochem. Med. Metab. Biol. 45, 271-291.
46. Brdiczka, D., Kaldis, P., and Wallimann, T. (1994) In vitro complex formation between the octamer of mitochondrial creatine kinase and porin, J. Biol. Chem. 269, 27640-27644.
47. Schlattner, U., Dolder, M., Wallimann, T., and Tokarska-Schlattner, M. (2001) Mitochondrial creatine kinase and mitochondrial outer membrane porin show a direct interaction that is modulated by calcium, J. Biol. Chem. 276, 48027-48030.
48. Xu, X., Decker, W., Sampson, M., Craigen, W., and Colombini, M. (1999) Mouse VDAC isoforms expressed in yeast: channel properties and their roles in mitochondrial outer membrane permeability, J. Membr. Biol. 170, 89-102.
49. Azoulay-Zohar, H., and Aflalo, C. (1999) Binding of rat brain hexokinase to recombinant yeast mitochondria: identification of necessary molecular determinants, J. Bioenerg. Biomembr. 31, 569-579.
50. Azoulay-Zohar, H., and Aflalo, C. (2000) Binding of rat brain hexokinase to recombinant yeast mitochondria: identification of necessary physico-chemical determinants. Eur. J. Biochem. 267, 2973-2980.
51. Nakashima, R. A., Mangan, P. S., Colombini, M., and Pedersen, P. L. (1986) Hexokinase receptor complex in hepatoma mitochondria: evidence from N,N′-dicyclohexylcarbodiimide-labeling studies for the involvement of the pore-forming protein VDAC, Biochemistry 25, 1015-1021.
52. Liu, M. Y., and Colombini, M. (1991) Voltage gating of the mitochondrial outer membrane channel VDAC is regulated by a very conserved protein, Am. J. Physiol. 260, C371-C374.
53. Zizi, M., Forte, M., Blachly-Dyson, E., and Colombini, M. (1994) NADH regulates the gating of VDAC, the mitochondrial outer membrane channel, J. Biol. Chem. 269, 1614-1616.
54. Wu, S., Sampson, M., Decker, W., and Craigen, W. (1999) Each mammalian mitochondrial outer membrane porin protein is dispensable: effects on cellular respiration, Biochem. Biophys. Acta 1452, 68-78.
55. Scaglia, N., Cai, Z., Anflous, K., Armstrong, D., Levin, M., Sweatt, J. D., and Craigen, W. (2002) Mitochondrial porin deficient mice: a murine model of Mendelian respiratory chain defects and encephalopathy, Workshop, Systems Biology Approaches to Health Care: Mitochondrial Proteomics. presented Sept 17, 2002.