Molecular epidemiology of human respiratory syncytial virus subgroup A over a six-year period (1999-2004) in Argentina

Journal of Medical Virology

Volumn 77, Issue 2, 2005, Pages 302-310

  Viegas, Mariana ^a   Mistchenko, Alicia S ^a  

^a HOSPITAL DE NIÑOS RICARDO GUTIÉRREZ   (Argentina)

Author keywords

Argentina; Genotypes; HRSVA; Molecular epidemiology; RFLP Patterns

Indexed keywords

AMINO ACID; NUCLEOTIDE; VIRUS GLYCOPROTEIN; VIRUS RNA;

AMINO ACID SEQUENCE; ARGENTINA; ARTICLE; CHILDHOOD DISEASE; CONTROLLED STUDY; DNA SEQUENCE; EPIDEMIC; GENOTYPE; HUMAN; HUMAN TISSUE; IMMUNOFLUORESCENCE; LOWER RESPIRATORY TRACT INFECTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; RESPIRATORY SYNCYTIAL PNEUMOVIRUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; VIRUS INFECTION; VIRUS ISOLATION;

ARGENTINA; EPIDEMIOLOGY, MOLECULAR; GENOTYPE; HUMANS; INFANT; PHYLOGENY; RESPIRATORY SYNCYTIAL VIRUS INFECTIONS; RESPIRATORY SYNCYTIAL VIRUS, HUMAN; RESPIRATORY TRACT INFECTIONS;

HUMAN RESPIRATORY SYNCYTIAL VIRUS; HYDRANGEA RINGSPOT VIRUS; SUBGROUP A;

EID: 24644517949     PISSN: 01466615     EISSN: None     Source Type: Journal    
DOI: 10.1002/jmv.20457     Document Type: Article

References (45)

1. Anderson LJ, Hierholzer JC, Tsou C, et al. 1985. Antigenic characterization of respiratory syncytial virus strains with monoclonal antibodies. J Infect Dis 151:626-633.
2. Araújo Moura FE, Blanc A, Frabasile S, Delfraro A, de Sierra MJ, Tome L, Gonçalves Ramos EA, Siqueira MM, Arbiza J. 2004. Genetic diversity of respiratory syncytial virus isolated during an epidemic period from children of North-Eastern Brazil. J Med Virol 74:156-160.
3. Avendaño LF, Palomino MA, Larrañaga C. 2003. Surveillance for respiratory syncytial virus in infants hospitalised for acute lower respiratory infection in Chile (1989 to 2000). J Clin Microbiol 41:4879-4882.
4. Cane PA, Pringle CR. 1995. Evolution of subgroup A respiratory syncytial virus: Evidence for progressive accumulation of amino acid changes in the attachment protein. J Virol 69:2918-2925.
5. Cane P, Matthews D, Pringle C. 1991. Identification of variable domains of the attachment (G) protein of subgroup A respiratory syncytial viruses. J Gen Virol 72:2091-2096.
6. Cane PA, Mathews DA, Pringle CR. 1994. Analysis of respiratory syncytial virus strain variation in successive epidemics in one city. J Clin Microbiol 32:1-4.
7. Carballal G, Videla C, Sequeira M, Mistchenko A, Requeijo P, Arbiza J. 2000. Respiratory syncytial virus: Changes in prevalence of subgroups A and B among Argentine children, 1990-1996. J Med Virol 61:275-279.
8. Carballal G, Videla CM, Espinosa MA, et al. 2001. Multicentered study of viral acute lower respiratory infections in children from four cities of Argentina, 1993-1994. J Med Virol 64:167-174.
9. Choi EH, Lee HJ. 2000. Genetic diversity and molecular epidemiology of the G protein of subgroups A and B of respiratory syncytial viruses isolated over 9 consecutive epidemics in Korea. J Infect Dis 181:1547-1546.
10. Chomczynski P, Sacch N. 1987. Single step method of RNA isolation by acid guanidinium thiocyanate-phenol-choroform extraction. Anal Biochem 162:156-159.
11. Collins PL, McIntosh K, Chanock RM. 1996. Respiratory syncytial virus. In: Fields BN, Knipe DM, Howley PM, et al. editors. Fields virology. Philadelphia: Lippincott-Raven. pp 1313-1351.
12. Cox MJ, Azevedo RS, Cane PA, Massad E, Medley GF. 1998. Seroepidemiological study of respiratory syncytial virus in Sao Paulo state, Brazil. J Med Virol 55:234-239.
13. Frabasile S, Delfraro A, Facal L, Videla C, Galiano M, de Sierra MJ, Ruchansky D, Virtureira N, Berois M, Carballal G, Russi J, Arbiza J. 2003. Antigenic and genetic variability of human respiratory syncytial virus (group A) isolated in Uruguay and Argentina: 1993-2001. J Med Virol 71:305-312.
14. García O, Martín M, Dopazo J, Arbiza J, Frabasile S, Russi J, Hortal M, Perez-Breña P, Martínez I, García Barreno B, Melero JA. 1994. Evolutionary pattern of human respiratory syncytial virus (subgroup A): Cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein. J Virol 68: 5448-5459.
15. Gardner PS, McQuilin J. 1968. Viral diagnosis by immunofluorescence. Lancet 16:597-813.
16. Glezen WP, Paredes A, Allison JE, Taber LH, Frank AL. 1981. Risk of respiratory syncytial virus infection for infants from low-income families in relationship to age, sex, ethnic group, and maternal antibody level. J Pediatr 98:708-715.
17. Hall TA. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98.
18. Hall CB, Walsh EE, Schnabel KC, Long CE, McConnochie KM, Hildreth SW, Anderson LJ. 1990. Ocurrence of group A and B of respiratory syncytial virus over 15 years: Associated epidemiologic and clinical characteristics in hospitalized and ambulatory children. J Infect Dis 162:1283-1290.
19. Henderson FW, Collier AM, Clyde WA, Jr., Denny FW. 1979. Respiratory syncytial virus infections, reinfections, and immunity. A prospective, longitudinal study in young children. N Engl J Med 300:530-534.
20. Johnson PR, Springgs MK, Olmsted RA, Collins PL. 1987. The G glycoprotein of human respiratory syncytial viruses of subgroup A and B: Extensive sequence divergence between antigenically related proteins. Proc Natl Acad Sci USA 84:5625-5629.
21. Melero JA, Rueda P, García-Barreno B. 1993. Antigenic variation of human respiratory syncytial virus G glycoprotein: Genetic mechanisms and evolutionary significance. In: Carrasco L, Sonemberg N, Wimmer E. editor. Regulation of gene expression in animal viruses. New York: Plenum Press.
22. Melero JA, García-Barreno B, Martínez I, Pringle CR, Cane PA. 1997. Antigenic structure, evolution, and immunobiology of human respiratory syncytial virus attachment (G) protein. J Gen Virol 78:2411-2418.
23. Mufson MA, Orvell C, Rafnar B, Norrby E. 1985. Two distinct subtypes of HRSV. J Gen Virol 66:2111-2124.
24. Page RD. 1996. TREEVIEW: An application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357-358.
25. Peret CT, Hall CB, Schnabel KC, Golub JA, Anderson LJ. 1998. Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community. J Gen Virol 79:2221-2229.
26. Peret TCT, Hall CB, Hammond GW, Piedras PA, Storch GA, Sullender WM, Tsou C, Anderson L. 2000. Circulation patterns of group A and B human respiratory syncytial virus genotypes in 5 communities in North America. J Infect Dis 181:1891-1896.
27. Polack FP, Karron RA. 2004. The future of respiratory syncytial virus vaccine development. Pediatr Infect Dis J 23:S65-S73.
28. Posada D, Crandall KA. 1998. Modeltest: Testing the model of DNA substitution. Bioinformatics 14:817-818.
29. Roca A, Loscertales MP, Quintó LL, Pérez-Breña P, Vaz N, Alonso PL, Saiz JC. 2001. Genetic variability among group A and B respiratory syncytial viruses in Mozambique: Identification of a new cluster of group B isolates. J Gen Virol 82:103-111.
30. Rozas J, Rozas R. 1999. DNASP version 3: An integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175.
31. Rueda P, Palomo C, García-Barreno B, Melero JA. 1995. The three C-terminal residues of human respiratory syncytial virus G glicoprotein (Long strain) are essential for integrity of multiple epitopes distinguishable by antiidiotypic antibodies. Virol immunol 8: 37-46.
32. Scott PD, Ochola R, Ngama M, Okiro EA, Nokes DJ, Medley GF, Cane PA. 2004. Molecular epidemiology of respiratory syncytial virus in Kilifi District, Kenya. J Med Virol 74:344-354.
33. Stockton J, Ellis JS, Saville M, Clewley JF, Zambon MC. 1998. Multiplex PCR for typing and subtyping influenza and respiratory syncytial viruses. J Clin Microbiol 36:2990-2995.
34. Straliotto SM, Nestor SM, Siqueira MM. 2001. Respiratory syncytial virus groups A and B in Porto Alegre, Brazil, from 1990 to 1995 and 1998. Mem Inst Oswaldo Cruz 96:155-158.
35. Sullender WM. 2000. Respiratry syncytial virus genetic and antigenic diversity. Clin Microbiol Rev 13:1-15.
36. Sullender WM, Sun L, Anderson LJ. 1993. Analysis of respiratory syncytial virus genetic variability with amplified cDNAs. J Clin Microbiol 31:1224-1231.
37. Sullender WM, Mufson MA, Prince GA, Anderson J, Wertz GW. 1998. Antigenic and genetic diversity among the attachment proteins of group A respiratory syncytial viruses that have repeat infections in children. J Infect Dis 178:925-932.
38. Swofford DL. 1998. PAUP*4.0-Phylogenetic analysis using parsimony (and other methods). Sinauer Associates, Sunder land, MA.
39. Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512-526.
40. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882.
41. Venter M, Madhi SA, Tiemessen CT, Schoub BD. 2001. Genetic diversity and molecular epidemiology of respiratory syncytial virus over four consecutive seasons in South Africa: Identification of new subgroup A and B genotypes. J Gen Virol 82:2117-2124.
42. Venter M, Collinson M, Schoub BD. 2002. Molecular epidemiological analysis of community circulating respiratory syncytial virus in rural South Africa: Comparison of viruses and genotypes responsible for different disease manifestations. J Med Virol 68:452-461.
43. Videla C, Carballal G, Misirlian A, Aguilar M. 1998. Acute lower respiratory infections due to respiratory syncytial virus and adenovirus among hospitalised children from Argentina. Clin Diagn Virol 10:17-23.
44. Viegas M, Barrero PR, Mistchenko AS. 2004. Respiratory viruses seasonality in children under five years of age in Buenos Aires, Argentina. A five-year analysis. J Infect 49:222-228.
45. Zlateva KT, Lemey P, Vandamme AM, Van Ranst M. 2004. Molecular evolution and circulation patterns of human respiratory syncytial virus subgroup A: Positively selected sites in the attachment G glycoprotein. J Virol 78:4675-4683.