메뉴 건너뛰기




Volumn 70, Issue 5, 2004, Pages 3122-3129

Isolation, characterization, and in situ detection of a novel chemolithoautotrophic sulfur-oxidizing bacterium in wastewater biofilms growing under microaerophilic conditions

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOFILMS; CELL CULTURE; GENES; RNA; WASTEWATER;

EID: 2442696848     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.70.5.3122-3129.2004     Document Type: Article
Times cited : (32)

References (39)
  • 2
    • 0000622269 scopus 로고
    • In situ identification of micro-organisms by whole-cell hybridization with rRNA-targeted nucleic acid probes
    • A. D. L. Akkerman, J. D. van Elsas, and F. J. de Bruijn (ed.). Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Amann, R. I. 1995. In situ identification of micro-organisms by whole-cell hybridization with rRNA-targeted nucleic acid probes, p. 1-15. In A. D. L. Akkerman, J. D. van Elsas, and F. J. de Bruijn (ed.), Molecular microbial ecology manual. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1995) Molecular Microbial Ecology Manual , pp. 1-15
    • Amann, R.I.1
  • 3
    • 0025099312 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
    • Amann, R. I., L. Krumholz, and D. A. Stahl. 1990. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172:762-770.
    • (1990) J. Bacteriol. , vol.172 , pp. 762-770
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 4
    • 0026532736 scopus 로고
    • Molecular and microscopic identification of sulfate-reducing bacteria in multispecies biofilms
    • Amann, R. I., J. Stromley, R. Devereux, R. Key, and D. A. Stahl. 1992. Molecular and microscopic identification of sulfate-reducing bacteria in multispecies biofilms. Appl. Environ. Microbiol. 58:614-623.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 614-623
    • Amann, R.I.1    Stromley, J.2    Devereux, R.3    Key, R.4    Stahl, D.A.5
  • 5
    • 0032456296 scopus 로고    scopus 로고
    • Molecular phylogenetic analysis of a bacterial community in Sulphur River, Parker Cave, Kentucky
    • Angert, E. R., D. E. Northup, A.-L. Reysenbach, A. S. Peek, B. M. Goebel, and N. R. Pace. 1998. Molecular phylogenetic analysis of a bacterial community in Sulphur River, Parker Cave, Kentucky. Am. Mineral. 83:1583-1592.
    • (1998) Am. Mineral. , vol.83 , pp. 1583-1592
    • Angert, E.R.1    Northup, D.E.2    Reysenbach, A.-L.3    Peek, A.S.4    Goebel, B.M.5    Pace, N.R.6
  • 7
    • 0032951952 scopus 로고    scopus 로고
    • Thiomicrospira kuenenii sp. nov. and Thiomicrospira frisia sp. nov., two mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacteria isolated from an intertidal mud flat
    • Brinkhoff, T., G. Muyzer, C. O. Wirsen, and J. Kuever. 1999. Thiomicrospira kuenenii sp. nov. and Thiomicrospira frisia sp. nov., two mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacteria isolated from an intertidal mud flat. Int. J. Syst. Bacteriol. 49:385-392.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 385-392
    • Brinkhoff, T.1    Muyzer, G.2    Wirsen, C.O.3    Kuever, J.4
  • 8
    • 0032929313 scopus 로고    scopus 로고
    • Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacterium isolated from a Thioploca mat
    • Brinkhoff, T., G. Muyzer, C. O. Wirsen, and J. Kuever. 1999. Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacterium isolated from a Thioploca mat. Int. J. Syst. Bacteriol. 49: 875-879.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 875-879
    • Brinkhoff, T.1    Muyzer, G.2    Wirsen, C.O.3    Kuever, J.4
  • 9
    • 84944816274 scopus 로고
    • Spectrophotometric determination of hydrogen sulfide in natural waters
    • Cline, J. D. 1969. Spectrophotometric determination of hydrogen sulfide in natural waters. Limnol. Oceanogr. 14:454-458.
    • (1969) Limnol. Oceanogr. , vol.14 , pp. 454-458
    • Cline, J.D.1
  • 11
    • 0027186961 scopus 로고
    • Isolation and characterization of Thiobacillus hydrothermalis sp. nov., a mesophilic obligately chemolithotrophic bacterium isolated from a deep-sea hydrothermal vent in Fiji Basin
    • Durand, P., A. L. Reysenbach, D. Prieur, and N. Pace. 1993. Isolation and characterization of Thiobacillus hydrothermalis sp. nov., a mesophilic obligately chemolithotrophic bacterium isolated from a deep-sea hydrothermal vent in Fiji Basin. Arch. Microbiol. 159:39-44.
    • (1993) Arch. Microbiol. , vol.159 , pp. 39-44
    • Durand, P.1    Reysenbach, A.L.2    Prieur, D.3    Pace, N.4
  • 12
    • 0034041256 scopus 로고    scopus 로고
    • Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfur-oxidizing bacteria isolated from oil field brine
    • Gevertz, D., A. J. Telang, G. Voordouw, and G. E. Jenneman. 2000. Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfur-oxidizing bacteria isolated from oil field brine. Appl. Environ. Microbiol. 66:2491-2501.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2491-2501
    • Gevertz, D.1    Telang, A.J.2    Voordouw, G.3    Jenneman, G.E.4
  • 13
    • 0026455131 scopus 로고
    • Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification
    • Hiraishi, A. 1992. Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification. Lett. Appl. Microbiol. 15:210-213.
    • (1992) Lett. Appl. Microbiol. , vol.15 , pp. 210-213
    • Hiraishi, A.1
  • 14
    • 0031756689 scopus 로고    scopus 로고
    • Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: Its transfer to the genus Acidiphilum as Acidiphilum acidophilum comb. nov.
    • Hiraishi, A., K. V. P. Nagashima, K. Matsuura, K. Shimada, S. Takaichi, N. Wakao, and Y. Katayama. 1998. Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: its transfer to the genus Acidiphilum as Acidiphilum acidophilum comb. nov. Int. J. Syst. Bacteriol. 48:1389-1398.
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 1389-1398
    • Hiraishi, A.1    Nagashima, K.V.P.2    Matsuura, K.3    Shimada, K.4    Takaichi, S.5    Wakao, N.6    Katayama, Y.7
  • 15
    • 0017654644 scopus 로고
    • Use of Nuclepore filters for counting bacteria by fluorescence microscopy
    • Hobbie, J. E., R. J. Daley, and S. Jasper. 1977. Use of Nuclepore filters for counting bacteria by fluorescence microscopy. Appl. Environ. Microbiol. 33:1225-1228.
    • (1977) Appl. Environ. Microbiol. , vol.33 , pp. 1225-1228
    • Hobbie, J.E.1    Daley, R.J.2    Jasper, S.3
  • 16
    • 0036136673 scopus 로고    scopus 로고
    • Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescent in situ hybridization
    • Ito, T., J. L. Nielsen, S. Okabe, Y. Watanabe, and P. H. Nielsen. 2002. Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescent in situ hybridization. Appl. Environ. Microbiol. 68:356-364.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 356-364
    • Ito, T.1    Nielsen, J.L.2    Okabe, S.3    Watanabe, Y.4    Nielsen, P.H.5
  • 17
    • 0036200881 scopus 로고    scopus 로고
    • Successional development of sulfate-reducing bacterial populations and their activities in a wastewater biofilm growing under microaerophilic conditions
    • Ito, T., S. Okabe, H. Satoh, and Y. Watanabe. 2002. Successional development of sulfate-reducing bacterial populations and their activities in a wastewater biofilm growing under microaerophilic conditions. Appl. Environ. Microbiol. 68:1392-1402.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1392-1402
    • Ito, T.1    Okabe, S.2    Satoh, H.3    Watanabe, Y.4
  • 18
    • 0019999242 scopus 로고
    • Mineralization of organic matter in the sea bed-the role of sulphate reduction
    • Jørgensen, B. B. 1982. Mineralization of organic matter in the sea bed-the role of sulphate reduction. Nature 296:643-645.
    • (1982) Nature , vol.296 , pp. 643-645
    • Jørgensen, B.B.1
  • 19
    • 0029076627 scopus 로고
    • Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus
    • Katayama, Y., A. Hiraishi, and H. Kuraishi. 1995. Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus. Microbiology 141:1469-1477.
    • (1995) Microbiology , vol.141 , pp. 1469-1477
    • Katayama, Y.1    Hiraishi, A.2    Kuraishi, H.3
  • 20
    • 0000650063 scopus 로고
    • Genus Thiobacillus
    • J. T. Staley, M. P. Bryant, N. Pfennig, and J. G. Holt (ed.). Williams & Wilkins, Baltimore, Md
    • Kelly, D. P., and A. H. Harrison. 1989. Genus Thiobacillus, p. 1842-1858. In J. T. Staley, M. P. Bryant, N. Pfennig, and J. G. Holt (ed.), Bergey's manual of systematic bacteriology, 1st ed., vol. 3. Williams & Wilkins, Baltimore, Md.
    • (1989) Bergey's Manual of Systematic Bacteriology, 1st Ed. , vol.3 , pp. 1842-1858
    • Kelly, D.P.1    Harrison, A.H.2
  • 21
    • 0033804108 scopus 로고    scopus 로고
    • Proposal for the reclassification of Thiobacillus novellus as Starkeya novella gen. nov., comb. nov., in the alpha-subclass of the Proteobacteria
    • Kelly, D. P., I. R. McDnald, and A. P. Wood. 2000. Proposal for the reclassification of Thiobacillus novellus as Starkeya novella gen. nov., comb. nov., in the alpha-subclass of the Proteobacteria. Int. J. Syst. Evol. Microbiol. 50: 1797-1802.
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 1797-1802
    • Kelly, D.P.1    McDnald, I.R.2    Wood, A.P.3
  • 22
    • 0034065246 scopus 로고    scopus 로고
    • Reclassification of some species of Thiobacillus to the newly designated genera Acidithiobacillus gen. nov. Halothiobacillus gen. nov. and Thermithiobacillus gen. nov.
    • Kelly, D. P., and A. P. Wood. 2000. Reclassification of some species of Thiobacillus to the newly designated genera Acidithiobacillus gen. nov., Halothiobacillus gen. nov. and Thermithiobacillus gen. nov. Int. J. Syst. Evol. Microbiol. 50:511-516.
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 511-516
    • Kelly, D.P.1    Wood, A.P.2
  • 23
    • 0037228204 scopus 로고    scopus 로고
    • Isolation and characterization of a sulfur-oxidizing chemolithotroph growing on crude oil under anaerobic conditions
    • Kodama, Y., and K. Watanabe. 2003. Isolation and characterization of a sulfur-oxidizing chemolithotroph growing on crude oil under anaerobic conditions. Appl. Environ. Microbiol. 69:107-112.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 107-112
    • Kodama, Y.1    Watanabe, K.2
  • 24
    • 0001402451 scopus 로고
    • The genera thiobacillus, thiomicrospira, and thiosphaera
    • A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K.-H. Schleifer (ed.). Springer-Verlag, New York, N.Y.
    • Kuenen, J. G., L. A. Robertson, and O. H. Tuovinen. 1991. The genera Thiobacillus, Thiomicrospira, and Thiosphaera, p. 2638-2657. In A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K.-H. Schleifer (ed.), The prokaryotes, 2nd ed., vol. 3. Springer-Verlag, New York, N.Y.
    • (1991) The Prokaryotes, 2nd Ed. , vol.3 , pp. 2638-2657
    • Kuenen, J.G.1    Robertson, L.A.2    Tuovinen, O.H.3
  • 25
    • 0026581545 scopus 로고
    • Microsensor measurement of sulfate reduction and sulfide oxidation in compact microbial communities of aerobic biofilms
    • Kühl, M., and B. B. Jørgensen. 1992. Microsensor measurement of sulfate reduction and sulfide oxidation in compact microbial communities of aerobic biofilms. Appl. Environ. Microbiol. 58:1164-1174.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1164-1174
    • Kühl, M.1    Jørgensen, B.B.2
  • 26
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow (ed.). John Wiley & Sons, Chichester, England
    • Lane, D. J. 1991. 16S/23S rRNA sequencing, p. 115-175. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley & Sons, Chichester, England.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 27
    • 0027068041 scopus 로고
    • Phylogenetic oligonucleotide probes for the major subclass of proteobacteria: Problems and solutions
    • Manz, W., R. Amann, W. Ludwig, M. Wagner, and K.-H. Schleifer. 1992. Phylogenetic oligonucleotide probes for the major subclass of proteobacteria: problems and solutions. Syst. Appl. Microbiol. 15:593-600.
    • (1992) Syst. Appl. Microbiol. , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Wagner, M.4    Schleifer, K.-H.5
  • 28
    • 0020537417 scopus 로고
    • Thiobacilli of the corroded concrete walls of the Hamburg sewer system
    • Milde, K., W. Sand, W. Wolff, and E. Bock. 1983. Thiobacilli of the corroded concrete walls of the Hamburg sewer system. J. Gen. Microbiol. 129:1327-1333.
    • (1983) J. Gen. Microbiol. , vol.129 , pp. 1327-1333
    • Milde, K.1    Sand, W.2    Wolff, W.3    Bock, E.4
  • 29
    • 0030968533 scopus 로고    scopus 로고
    • Phylogeny of Thiobacillus cuprinus and other mixotrophic Thiobacilli: Proposal for Thiomonas gen. nov.
    • Moreira, D., and R. Amils. 1997. Phylogeny of Thiobacillus cuprinus and other mixotrophic Thiobacilli: proposal for Thiomonas gen. nov. Int. J. Syst. Bacteriol. 47:522-528.
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 522-528
    • Moreira, D.1    Amils, R.2
  • 31
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer, G., E. C. de Waal, and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 32
    • 1642439179 scopus 로고    scopus 로고
    • Sulfate-reducing bacterial community structure and their contribution to carbon mineralization in a wastewater biofilm growing under microaerophilic conditions
    • Okabe, S., T. Ito, and H. Satoh. 2003. Sulfate-reducing bacterial community structure and their contribution to carbon mineralization in a wastewater biofilm growing under microaerophilic conditions. Appl. Microbiol. Biotechnol. 63:322-334.
    • (2003) Appl. Microbiol. Biotechnol. , vol.63 , pp. 322-334
    • Okabe, S.1    Ito, T.2    Satoh, H.3
  • 33
    • 0032746992 scopus 로고    scopus 로고
    • Analyses of spatial distributions of sulfate-reducing bacteria and their activity in aerobic wastewater biofilms
    • Okabe, S., T. Itoh, H. Satoh, and Y. Watanabe. 1999. Analyses of spatial distributions of sulfate-reducing bacteria and their activity in aerobic wastewater biofilms. Appl. Environ. Microbiol. 65:5107-5116.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 5107-5116
    • Okabe, S.1    Itoh, T.2    Satoh, H.3    Watanabe, Y.4
  • 34
    • 0029739071 scopus 로고    scopus 로고
    • Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an aerobic enrichment culture utilizing alkylbenzenes from crude oil
    • Rabus, R., M. Fukui, H. Wilkers, and F. Widdel. 1996. Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an aerobic enrichment culture utilizing alkylbenzenes from crude oil. Appl. Environ. Microbiol. 62:3605-3613.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 3605-3613
    • Rabus, R.1    Fukui, M.2    Wilkers, H.3    Widdel, F.4
  • 35
    • 0032190359 scopus 로고    scopus 로고
    • Structure and functional dynamics of sulfate-reducing populations in bacterial biofilms
    • Santegoeds, C. M., T. G. Ferdelman, G. Muyzer, and D. de Beer. 1998. Structure and functional dynamics of sulfate-reducing populations in bacterial biofilms. Appl. Environ. Microbiol. 64:3731-3739.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3731-3739
    • Santegoeds, C.M.1    Ferdelman, T.G.2    Muyzer, G.3    De Beer, D.4
  • 36
    • 0034069967 scopus 로고    scopus 로고
    • Halothiobacillus kellyi sp. nov., a mesophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium isolated from a shallow-water hydrothermal vent in the Aegean sea, and emended description of the genus Halothiobacillus
    • Sievert, S. M., T. Heidorn, and J. Kuever. 2000. Halothiobacillus kellyi sp. nov., a mesophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium isolated from a shallow-water hydrothermal vent in the Aegean sea, and emended description of the genus Halothiobacillus. Int. J. Syst. Evol. Microbiol. 50:1229-1237.
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 1229-1237
    • Sievert, S.M.1    Heidorn, T.2    Kuever, J.3
  • 37
    • 0038725668 scopus 로고    scopus 로고
    • A gene encoding a novel extremely thermostable 1,4-β-xylanase isolated directly from an environmental DNA sample
    • Sunna, A., and P. L. Bergquist. 2003. A gene encoding a novel extremely thermostable 1,4-β-xylanase isolated directly from an environmental DNA sample. Extremophiles 7:63-70.
    • (2003) Extremophiles , vol.7 , pp. 63-70
    • Sunna, A.1    Bergquist, P.L.2
  • 38
    • 0021940466 scopus 로고
    • Filamentous sulfur bacteria of activated sludge: Characterization of Thiothrix, Beggiatoa, and Eikelboom type 021N strains
    • Williams, T. M., and R. F. Unz. 1985. Filamentous sulfur bacteria of activated sludge: characterization of Thiothrix, Beggiatoa, and Eikelboom type 021N strains. Appl. Environ. Microbiol. 49:887-898.
    • (1985) Appl. Environ. Microbiol. , vol.49 , pp. 887-898
    • Williams, T.M.1    Unz, R.F.2
  • 39
    • 0025788835 scopus 로고
    • Isolation and characterisation of Thiobacillus halophilus sp. nov., a sulphur-oxidizing autotrophic eubacterium from a Western Australian hypersline lake
    • Wood, A. P., and D. P. Kelly. 1991. Isolation and characterisation of Thiobacillus halophilus sp. nov., a sulphur-oxidizing autotrophic eubacterium from a Western Australian hypersline lake. Arch. Microbiol. 156:277-280.
    • (1991) Arch. Microbiol. , vol.156 , pp. 277-280
    • Wood, A.P.1    Kelly, D.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.