Stability of genetic structure and effective population size inferred from temporal changes of microsatellite DNA polymorphisms in the land snail Helix aspersa (Gastropoda: Helicidae)

Biological Journal of the Linnean Society

Volumn 82, Issue 1, 2004, Pages 89-102

  Arnaud, Jean François ^a,b   Laval, Guillaume ^c  

^a UNIV LILLE   (France)

^b UNIVERSITÉ DE RENNES 1   (France)

^c Zoologisches Institut   (Switzerland)

Author keywords

Extinction; F statistics; Gene flow; Genetic diversity; Genetic drift; Metapopulation; Population structure

Indexed keywords

EFFECTIVE POPULATION SIZE; EXTINCTION; GENETIC STRUCTURE; METAPOPULATION; POPULATION GENETICS; SNAIL;

BASSE-NORMANDIE; EURASIA; EUROPE; FRANCE; MANCHE; MONT-SAINT-MICHEL BAY; WESTERN EUROPE;

CHRISTIA; GASTROPODA; HELICIDAE; HELIX ASPERSA; STYLOMMATOPHORA;

EID: 2442668037     PISSN: 00244066     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1095-8312.2004.00320.x     Document Type: Article

References (63)

1. e from temporally spaced samples. Genetics 156: 2109-2118.
2. Arnaud J-F. 2003. Metapopulation genetic structure and migration pathways in the land snail Helix aspersa: influence of landscape heterogeneity. Landscape Ecology 18: 333-346.
3. Arnaud J-F, Madec L, Daguzan J. 1999a. Spatial differentiation of allozyme frequencies in a subdivided population of the land snail Helix aspersa. Journal of Molluscan Studies 65: 267-271.
4. Arnaud J-F, Madec L, Bellido A, Guiller A. 1999b. Microspatial genetic structure in the land snail Helix aspersa (Gastropoda: Helicidae). Heredity 83: 110-119.
5. Arnaud J-F, Madec L, Guiller A, Bellido A. 2001. Spatial analysis of allozyme and microsatellite DNA polymorphisms in the land snail Helix aspersa (Gastropoda: Helicidae). Molecular Ecology 10: 1563-1576.
6. Arnaud J-F, Madec L, Guiller A, Deunff J. 2003. Population genetic structure in a human-disturbed environment: a case study in the land snail Helix aspersa (Gastropoda: Pulmonata). Heredity 90: 451-458.
7. Baur B. 1993. Population structure, density, dispersal and neighbourhood size in Arianta arbustorum (Linnaeus, 1758) (Pulmonata: Helicidae). Annalen des Naturhistorischen Museums Wien 94/95B: 307-321.
8. Bellido A, Madec L, Arnaud J-F, Guiller A. 2002. Spatial structure of shell polychromatism in populations of Cepaea nemoralis: new techniques for an old debate. Heredity 88: 75-82.
9. Berthier P, Beaumont MA, Cornuet J-M, Luikart G. 2002. Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: a genealogical approach. Genetics 160: 741-751.
10. Cavalli-Sforza LL, Edwards AWF. 1967. Phylogenetic analysis: models and estimation procedures. American Journal of Human Genetics 19: 233-257.
11. Crook SJ. 1980. Studies on the ecological genetics of Helix aspersa. PhD Thesis, University of Dundee, UK.
12. Davison A, Clarke B. 2000. History or current selection? A molecular analysis of 'area effects' in the land snail Cepaea nemoralis. Proceedings of the Royal Society of London, Series B 267: 1399-1405.
13. El Mousadik A, Petit RJ. 1996. High level of genetic differentiation for allelic richness among population of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theoretical and Applied Genetics 92: 832-839.
14. Frankham R, Ballou JD, Briscoe DA. 2002. Introduction to conservation genetics. Cambridge: Cambridge University Press.
15. Funk WC, Tallmon DA, Allendorf FW. 1999. Small effective population size in the long-toed salamander. Molecular Ecology 8: 1633-1640.
16. Goudet J. 1995. FSTAT (Version 1.2). A computer program to calculate F-statistics. Journal of Heredity 86: 485-486.
17. Goudet J, Raymond M, De Meeüs T, Rousset F. 1996. Testing differentiation in diploid populations. Genetics 144: 1933-1940.
18. Greenwood JJD. 1974. Effective population numbers in the snail Cepaea nemoralis. Evolution 28: 513-526.
19. Guiller A, Madec L, Daguzan J. 1994. Geographical patterns of genetic differentiation in the landsnail Helix aspersa Müller (Gastropoda: Pulmonata). Journal of Molluscan Studies 60: 205-221.
20. Guiller A, Arnaud J-F, Vautrin D, Solignac M. 2000. Highly polymorphic microsatellite markers in the landsnail Helix aspersa (Mollusca: Gastropoda). Molecular Ecology 9: 1191-1193.
21. Guinand B, Scribner KT, Page KS, Burnham-Curtis MK. 2003. Genetic variation over space and time: analyses of extinct and remnant lake trout populations in the Upper Great Lakes. Proceedings of the Royal Society of London, Series B 270: 425-433.
22. Hansson L. 1991. Dispersal in the edible snail, Helix pomatia: a test case for present generalizations. Acta Oecologica 12: 761-769.
23. Harrison S, Taylor AD. 1997. Empirical evidence for metapopulation dynamics. In: Hanski I, Gilpin ME, eds. Metapopulation biology: ecology, genetics, and evolution. San Diego, CA: Academic Press, 27-42.
24. Heath DD, Busch C, Kelly J, Atagi DY. 2002. Temporal change in genetic structure and effective population size in steelhead trout (Oncorhynchus mykiss). Molecular Ecology 11: 197-214.
25. Hossaert-McKey M, Valero M, Magda D, Jarry M, Cuguen J, Vernet P. 1996. The evolving genetic history of a population of Lathyrus sylvestris: evidence from temporal and spatial genetic structure. Evolution 50: 1808-1821.
26. Ingvarsson PK, Olsson K. 1997. Hierarchical genetic structure and effective population sizes in Phalacrus substriatus. Heredity 79: 153-161.
27. Jehle R, Arntzen JW, Burke T, Krupa AP, Hödl W. 2001. The annual number of breeding adults and the effective population size of syntopic newts (Trituras cristatus, T. marmoratus). Molecular Ecology 10: 839-850.
28. Kinnison MT, Bentzen P, Unwin MJ, Quinn TP. 2002. Reconstructing recent divergence: evaluating nonequilibrium population structure in New Zealand chinook salmon. Molecular Ecology 11: 739-754.
29. Lamotte M. 1951. Recherches sur la structure génétique des populations naturelles de Cepaea nemoralis (L.). Bulletin Biologique de la France et de la Belgique 35 (Suppl.): 1-239.
30. Laval G. 2001. Eléments de choix des marqueurs et des méthodes dans l'analyse de la diversité génétique intra spécifique: cas des races animales domestiques. PhD Thesis, I.N.A.P.G., France.
31. Laval G, SanCristobal M, Chevalet C. 2003. Maximum-likelihood and Markov Chain Monte Carlo approaches to estimate inbreeding and effective size from allele frequency changes. Genetics 164: 1189-1204.
32. Lehmann T, Hawley WA, Grebert H, Collins FH. 1998. The effective population size of Anopheles gambiae in Kenya: implications for population structure. Molecular Biology and Evolution 15: 264-276.
33. Lenfant P, Planes S. 2002. Temporal genetic changes between cohorts in a natural population of a marine fish, Diplodus sargus. Biological Journal of the Linnean Society 76: 9-20.
34. Madec L. 1991. Genetic divergence in natural populations of the land snail Helix aspersa Müller, 1774. Journal of Molluscan Studies 57: 483-487.
35. Madec L, Guiller A, Coutellec-Vreto M-A, Desbuquois C. 1998. Size-fecundity relationships in the land snail Helix aspersa: preliminary results on a form outside the norm. Invertebrate Reproduction and Development 34: 83-90.
36. Madec L, Desbuquois C, Coutellec-Vreto M-A. 2000. Phenotypic plasticity in reproductive traits: importance in the life history of Helix aspersa (Mollusca: Helicidae) in a recently colonized habitat. Biological Journal of the Linnean Society 69: 25-39.
37. ie.
38. McCauley DE. 1995. Effects of population dynamics on genetics in mosaic landscapes. In: Hansson L, Fahrig L, Merriam G, eds. Mosaic landscapes and ecological processes. London: Chapman & Hall, 178-198.
39. Murray J. 1964. Multiple mating and effective population size in Cepaea nemoralis. Evolution 18: 283-291.
40. Nei M, Tajima F. 1981. Genetic drift and estimation of effective population size. Genetics 98: 625-640.
41. Olivieri I, Gouyon P-H. 1997. Evolution of migration rate and other traits: the metapopulation effect. In: Hanski I, Gilpin ME, eds. Metapopulation biology: ecology, genetics, and evolution. San Diego, CA: Academic Press, 293-323.
42. Pertoldi C, Hansen MM, Loeschcke V, Madsen AB, Jacobsen L, Baagoe H. 2001. Genetic consequences of population decline in the European otter (Lutra lutra): an assessment of microsatellite DNA variation in Danish otters from 1883 to 1993. Proceedings of the Royal Society of London, Series B 268: 1775-1781.
43. Pfenninger M. 2002. Relationship between microspatial population genetic structure and habitat heterogeneity in Pomatias elegans (O.F. Müller, 1774) (Caenogastropoda, Pomatiasidae). Biological Journal of the Linnean Society 76: 565-575.
44. Pfenninger M, Bahl A, Streit B. 1996. Isolation by distance in a population of small land snail Trochoidea geyeri: evidence from direct and indirect methods. Proceedings of the Royal Society of London, Series B 263: 1211-1217.
45. Pfenninger M, Eppenstein A, Magnin F. 2003. Evidence for ecological speciation in the sister species Candidula unifasciata (Poiret, 1801) and C. rugosiuscula (Michaud, 1831) (Helicellinae, Gastropoda). Biological Journal of the Linnean Society 79: 611-628.
46. Pollak E. 1983. A new method for estimating the effective population size from allele frequency changes. Genetics 104: 531-548.
47. Raybould AF, Clarke RT, Bond JM, Welters RE, Gliddon CJ. 2002. Inferring patterns of dispersal from allele frequency data. In: Bullock JM, Kenward RE, Hails RS, eds. Dispersal ecology. Oxford, UK: Blackwell Science, 89-110.
48. Raymond M, Rousset F. 1995. GENEPOP (Version 1.2.): a population genetics software for exact tests and ecumenicism. Journal of Heredity 86: 248-249.
49. Reynolds J, Weir BS, Cockerham CC. 1983. Estimation of the coancestry coefficient: basis for a short-term genetic distance. Genetics 105: 767-779.
50. Rice WR. 1989. Analyzing tables of statistical tests. Evolution 43: 223-225.
51. Selander RK, Kaufman DW. 1975. Genetic structure of populations of the brown snail (Helix aspersa). I. Microgeographic variation. Evolution 29: 385-401.
52. Tarr CL, Conant S, Fleischer RC. 1998. Founder events and variation at microsatellite loci in an insular passerine bird, the Laysan finch (Telespiza cantans). Molecular Ecology 7: 719-731.
53. Tessier N, Bernatchez L. 1999. Stability of population structure and genetic diversity across generations assessed by microsatellites among sympatric populations of landlocked Atlantic salmon (Salmo salar L.). Molecular Ecology 8: 169-179.
54. Thrall PH, Burdon JJ, Murray BR. 2000. The metapopulation paradigm: a fragmented view of conservation biology. In: Young AG, Clarke GM, eds. Genetics, demography and viability of fragmented populations. Cambridge, UK: Cambridge University Press, 75-95.
55. Turner TF, Salter LA, Gold JR. 2001. Temporal-method estimates of Ne from highly polymorphic loci. Conservation Genetics 2: 297-308.
56. Viard F, Justy F, Jarne P. 1997. Population dynamics inferred from temporal variation at microsatellite loci in the selfing snail Bulinus truncatus. Genetics 146: 973-982.
57. Wang J, Caballero A. 1999. Developments in predicting the effective size of subdivided populations. Heredity 82: 212-226.
58. Wang J, Whitlock MC. 2003. Estimating effective population size and migration rates from genetic samples over space and time. Genetics 163: 429-446.
59. Waples RS. 1989. A generalized approach for estimating effective population size from temporal changes in allele frequency. Genetics 121: 379-391.
60. Waples RS. 1991. Genetic methods for estimating the effective size of cetacean populations. In: Hoelzel AR, ed. Genetic ecology of whales and dolphins. Cambridge, UK: International Whaling Commission (Special Issue no. 13), 279-300.
61. Weir BS, Cockerham CC. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
62. Whitlock MC. 2001. Dispersal and the genetic properties of metapopulations. In: Clobert J, Danchin E, Dhondt AA, Nichols JD, eds. Dispersal. Oxford, UK: Oxford University Press, 273-282.
63. Wright S. 1931. Evolution in Mendelian populations. Genetics 16: 97-159.