RNase ES of streptomyces coelicolor A3(2) can complement the rne and rng mutations in escherichi coli

Bioscience, Biotechnology and Biochemistry

Volumn 67, Issue 8, 2003, Pages 1767-1771

  Inagawa, Takabumi ^a   Okamoto, Susumu ^a   Wachi, Masaaki ^b   Ochi, Kozo ^a  

^a NATIONAL FOOD RESEARCH INSTITUTE   (Japan)

^b TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

Author keywords

Escherichia coli; RNase ES; Streptomyces coelicolor A3(2)

Indexed keywords

ESCHERICHIA COLI; FELIS CATUS; PROKARYOTA; STREPTOMYCES; STREPTOMYCES COELICOLOR;

BACTERIAL RNA; ESCHERICHIA COLI PROTEIN; RECOMBINANT PROTEIN; RIBONUCLEASE; RIBONUCLEASE E; RNA 16S; RNG PROTEIN, E COLI;

ARTICLE; BACTERIAL GENE; BIOSYNTHESIS; ENZYMOLOGY; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; GENETIC COMPLEMENTATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; PHENOTYPE; STREPTOMYCES;

ENDORIBONUCLEASES; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION; GENES, BACTERIAL; GENETIC COMPLEMENTATION TEST; MUTATION; PHENOTYPE; RECOMBINANT PROTEINS; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; STREPTOMYCES;

EID: 2442555334     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.67.1767     Document Type: Article

References (24)

1. Brawerman, G., and Belasco, J. G., Control of messenger RNA stability. Academic Press, San Diego (1993).
2. Ono, M., and Kuwano, M., A conditional lethal mutation in an Escherichia coli strain with a longer chemical lifetime of messenger RNA. J. Mol. Biol., 129, 343-3S7 (1979).
3. Li, Z., Pandit, S., and Deutscher, M. P., RNase G (CafA protein) and RNase E are both required for the S' maturation of 16S ribosomal RNA. EMBO J., 18, 2878-288S (1999).
4. Wachi, M., Umitsuki, G., Shimizu, M., Takada, A., and Nagai, K., Escherichia coli cafA gene encodes a novel RNase, designated as RNase G, involved in processing of the S' end of 16S rRNA. Biochem. Biophys. Res. Commun., 259, 483-488 (1999).
5. Kuwano, M., Ono, M., Endo, H., Hori, K., Nakamura, K., Hirota, Y., and Ohnishi, Y., Gene affecting longevity of messenger RNA: a mutant of Escherichia coli with altered mRNA stability. Mol. Gen. Genet., 154, 279-28S (1977).
6. Ghora, B. K., and Apirion, D., Structural analysis and in vitro processing to pS rRNA of a 9S RNA molecule isolated from an rne mutant of E. coli. Cell, 15, 10SS-1066 (1978).
7. Okada, Y., Wachi, M., Hirata, A., Suzuki, K., Nagai, K., and Matsuhashi, M., Cytoplasmic axial filaments in Escherichia coli cells: possible function in the mechanism of chromosome segregation and cell division. J. Bacteriol., 176, 917-922 (1994).
8. Umitsuki, G., Wachi, M., Takada, A., Hikichi, T., and Nagai, K., Involvement of RNase G in in vivo mRNA metabolism in Escherichia coli. Genes Cells, 6, 403-410 (2001).
9. Wachi, M., Kaga, N., Umitsuki, G., Clark, D. P., and Nagai, K., A novel RNase G mutant that is defective in degradation of adhE mRNA but proficient in the processing of 16S rRNA precursor. Biochem. Biophys. Res. Commun., 289, 1301-1306 (2001).
10. Kaga, N., Umitsuki, G., Nagai, K., and Wachi, M., RNase G-dependent degradation of the eno mRNA encoding a glycolysis enzyme enolase in Escherichia coli. Biosci. Biotechnol. Biochem., 66, 2216-2220 (2002).
11. Mackie, G. A., Ribonuclease E is a S'-end-dependent endonuclease. Nature, 395, 720-723 (1998).
12. McDowall, K. J., Lin-Chao, S., and Cohen, S. N., A + U content rather than a particular nucleotide order determines the specificity of RNase E cleavage. J. Biol. Chem., 269, 10790-10796 (1994).
13. Tock, M. R., Walsh, A. P., Carroll, G., and McDowall, K. J., The CafA protein required for the S'-maturation of 16S rRNA is a S'-end-dependent ribonuclease that has context-dependent broad sequence specificity. J. Biol. Chem., 275, 8726-8732 (2000).
14. Condon, C., Brechemier-Baey, D., Beltchev, B., Grunberg-Manago, M., and Putzer, H., Identification of the gene encoding the SS ribosomal RNA maturase in Bacillus subtilis: mature SS rRNA is dispensable for ribosome function. RNA, 7, 242-253 (2001).
15. Bentley, S. D., Chater, K. F., Cerdeno-Tarraga, A. M., Challis, G. L., Thomson, N. R., James, K. D., Harris, D. E., Quail, M. A., Kieser, H., Harper, D., Bateman, A., Brown, S., Chandra, G., Chen, C. W., Collins, M., Cronin, A., Fraser, A., Goble, A., Hidalgo, J., Hornsby, T., Howarth, S., Huang, C. H., Kieser, T., Larke, L., Murphy, L., Oliver, K., O’Neil, S., Rabbinowitsch, E., Rajandream, M. A., Rutherford, K., Rutter, S., Seeger, K., Saunders, D., Sharp, S., Squares, R., Squares, S., Taylor, K., Warren, T., Wietzorrek, A., Woodward, J., Barrell, B. G., Parkhill, J., and Hopwood, D. A., Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature, 417, 141-147 (2002).
16. Hagege, J. M., and Cohen, S. N., A developmentally regulated Streptomyces endoribonuclease resembles ribonuclease E of Escherichia coli. Mol. Microbiol., 2S, 1077-1090 (1997).
17. Bralley, P., and Jones, G. H., Poly(A) polymerase activity and RNA polyadenylation in Streptomyces coelicolor A3(2). Mol. Microbiol., 40, 1155-1164 (2001).
18. Bralley, P., and Jones, G. H., cDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor. Microbiology, 148, 1421-142S (2002).
19. Price, B., Adamidis, T., Kong, R., and Champness, W., A Streptomyces coelicolor antibiotic regulatory gene, absB, encodes an RNase III homolog. J. Bac-teriol., 181, 6142-6151 (1999).
20. Jones, G. H., and Bibb, M. J., Guanosine pen-taphosphate synthetase from Streptomyces antibioti-cus is also a polynucleotide phosphorylase. J. Bac-teriol., 178, 4281-4288 (1996).
21. Lee, K., Bernstein, J. A., and Cohen, S. N., RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coli. Mol. Microbiol., 43, 144S-14S6 (2002).
22. Wachi, M., Umitsuki, G., and Nagai, K., Functional relationship between Escherichia coli RNase E and the CafA protein. Mol. Gen. Genet., 253, S1S-S19 (1997).
23. Diwa, A., Bricker, A. L., Jain, C., and Belasco, J. G., An evolutionarily conserved RNA stem-loop functions as a sensor that directs feedback regulation of RNase E gene expression. Genes Dev., 14, 1249-1260 (2000).
24. Gurevitz, M., Jain, S. K., and Apirion, D., Identification of a precursor molecular for the RNA moiety of the processing enzyme RNase P. Proc. Natl. Acad. Sci. USA, 80, 4450-4454 (1983)