Roles of Trp144 and Tyr203 in copper-containing nitrite reductase from Achromobacter cycloclastes IAM1013

Biochemical and Biophysical Research Communications

Volumn 336, Issue 1, 2005, Pages 210-214

  Yamaguchi, Kazuya ^a   Shuta, Kazuyoshi ^a   Suzuki, Shinnichiro ^a  

^a OSAKA UNIVERSITY   (Japan)

Author keywords

Copper protein; Denitrification; Electron transfer; Metalloenzyme; Nitrite reductase; Redox

Indexed keywords

AZURIN; COPPER DERIVATIVE; NITRITE REDUCTASE; TRYPTOPHAN; TYROSINE;

ACHROMOBACTER CYCLOCLASTES; ARTICLE; ELECTRON TRANSPORT; ENZYME ACTIVITY; GENE MUTATION; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; WILD TYPE;

ACHROMOBACTER CYCLOCLASTES; COPPER; ELECTROCHEMISTRY; ELECTRON TRANSPORT; KINETICS; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; NITRATE REDUCTASE; NITRATE REDUCTASES; PROTEIN CONFORMATION; TRYPTOPHAN; TYROSINE;

ACHROMOBACTER CYCLOCLASTES;

EID: 24344505512     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2005.08.076     Document Type: Article

References (26)

1. W.G. Zumft Cell biology and molecular basis of denitrification Microbiol. Mol. Biol. Rev. 61 1997 533 616
2. S. Suzuki, K. Kataoka, K. Yamaguchi, T. Inoue, and Y. Kai Structure-function relationships of copper-containing nitrite reductases Coord. Chem. Rev. 190-192 1999 245 265
3. S. Suzuki, K. Kataoka, and K. Yamaguchi Metal coordination and mechanism of multicopper nitrite reductase Acc. Chem. Res. 33 2000 728 735
4. K. Yamaguchi, K. Kataoka, M. Kobayashi, K. Itoh, A. Fukui, and S. Suzuki Characterization of two type 1 Cu sites of Hyphomicrobium denitrificans nitrite reductase: a new class of copper-containing nitrite reductases Biochemistry 43 2004 14180 14188
5. K. Kataoka, K. Yamaguchi, M. Kobayashi, T. Mori, N. Bokui, and S. Suzuki Structure-based engineering of Alcaligenes xylosoxidans copper-containing nitrite reductase enhances intermolecular electron transfer reaction with pseudoazurin J. Biol. Chem. 279 2004 53374 53378
6. K. Kataoka, K. Yamaguchi, S. Sakai, K. Takagi, and S. Suzuki Characterization and function of Met150Gln mutant of copper-containing nitrite reductase from Achromobacter cycloclastes IAM1013 Biochem. Biophys. Res. Commun. 303 2003 519 524
7. L.M. Murphy, F.E. Dodd, F.K. Yousafzai, R.R. Eady, and S.S. Hasnain Electron donation between copper containing nitrite reductases and cupredoxins: the nature of protein-protein interaction in complex formation J. Mol. Biol. 315 2002 859 871
8. M.L. Barrett, R.L. Harris, S. Antonyuk, M.A. Hough, M.J. Ellis, G. Saweres, R.R. Eady, and S.S. Hasnain Insights into redox partner interactions and substrate binding in nitrite reductase from Alcaligenes xylosoxidans: crystal structures of the Trp138His and His313Gln mutants Biochemistry 43 2004 16311 16319
9. K. Kataoka, H. Furusawa, K. Takagi, K. Yamaguchi, and S. Suzuki Functional analysis of conserved aspartate and histidine residues located around the type 2 copper site of copper-containing nitrite reductase J. Biochem. 127 2000 345 350
10. - bound and with type II copper depleted J. Biol. Chem. 270 1995 27458 27474
11. M.E.P. Murphy, S. Yurley, and E.T. Adman Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis J. Biol. Chem. 272 1997 28455 28460
12. L.B. LaCroix, S.E. Shadle, Y. Wang, B.A. Averill, B. Hedman, K.O. Hodgson, and E.I. Solomon Electronic structure of the perturbed blue copper site in nitrite reductase: spectroscopic properties, bonding, and implications for the entatic/rack state J. Am. Chem. Soc. 118 1996 7755 7768
13. F.E. Dodd, S.S. Hasnain, Z.H.L. Abraham, R.R. Eady, and B.E. Smith Structures of a blue-copper nitrite reductase and its substrate-bound complex Acta Crystallogr. D 53 1997 406 418
14. F.E. Dodd, J. Van Beeumen, R.R. Eady, and S.S. Hasnain X-ray structure of a blue-copper nitrite reductase in two crystal forms. The nature of the copper sites, mode of substrate binding and recognition by redox partner J. Mol. Biol. 282 1998 369 382
15. T. Inoue, M. Gotoda, Deligeer, K. Kataoka, S. Suzuki, K. Yamaguchi, H. Watanabe, M. Goho, and Y. Kai Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 Å resolution: a comparison between blue and green nitrite reductases J. Biochem. 124 1998 876 879
16. T. Kohzuma, S. Takase, S. Shidara, and S. Suzuki Electrochemical properties of copper proteins, pseudoazurin, and nitrite reductase from Achromobacter cycloclastes IAM 1013 Chem. Lett. 1993 149 152
17. R.S. Nicholson, and I. Shain Theory of stationary electrode polarography, single scan and cyclic methods applied to reversible, irreversible, and kinetic systems Anal. Chem. 36 1964 706 723
18. W.A. Pürtz, J. Butler, E.J. Land, and A.J. Swallow Direct demonstration of electron transfer between tryptophan and tyrosine in proteins Biochem. Biophys. Res. Commun. 96 1980 408 414
19. J. Butler, E.J. Land, W.A. Prütz, and A.J. Swallow Charge transfer between tryptophan and tyrosine in protein Biochim. Biophys. Acta 705 1982 150 162
20. M. Faraggi, M.R. DeFelippis, and M.H. Klapper Long-range electron transfer between tyrosine and tryptophan in peptides J. Am. Chem. Soc. 111 1989 5141 5145
21. C.-Y. Lee A possible biological role of the electron transfer between tyrosine and tryptophan FEBS Lett. 299 1992 119 123
22. C. Aubert, P. Mathis, A.P.M. Eker, and K. Brettel Intraprotein electron transfer between tyrosine and tryptophan in DNA photolyase from Anacystis nidulans Proc. Natl. Acad. Sci. USA 96 1999 5423 5427
23. X.-Y. Li Electron transfer between tryptophan and tyrosine: theoretical calculation of electron transfer matrix element for intramolecular hole transfer J. Comp. Chem. 22 2001 565 579
24. M. Stuart-Audette, Y. Blouquit, M. Faraggi, C. Sicard-Roselli, C. Houee-Levin, and P. Jolles Re-evaluation of intramolecular long-range electron transfer between tyrosine and tryptophan in lysozymes: evidence for the participation of other residues Eur. J. Biochem. 270 2003 3565 3571
25. C.C. Page, C.C. Moser, X. Chen, and P.L. Dutton Natural engineering principles of electron tunneling in biological oxidation-reduction Nature 402 1999 47 52
26. C.C Page, C.C. Moser, and P.L. Dutton Mechanism for electron transfer within and between proteins Curr. Opin. Chem. Biol. 7 2003 551 556