Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis: Mechanistic implications

Journal of Biological Chemistry

Volumn 272, Issue 45, 1997, Pages 28455-28460

  Murphy, Michael E P ^a,b   Turley, Stewart ^a   Adman, Elinor T ^a,c  

^a UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^c UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ASCORBIC ACID; COPPER; HISTIDINE; HYDROXIDE; NITRITE; NITRITE REDUCTASE; OXYGEN; WATER;

ALCALIGENES FAECALIS; ARTICLE; DENITRIFICATION; ENZYME ACTIVE SITE; ENZYME CONFORMATION; ENZYME MECHANISM; NONHUMAN; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL;

ALCALIGENES; BINDING SITES; ESCHERICHIA COLI; MODELS, CHEMICAL; MODELS, MOLECULAR; NITRITE REDUCTASES; NITRITES; OXIDATION-REDUCTION;

EID: 0030658026     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.272.45.28455     Document Type: Article

References (40)

1. Kakutani, T., Watanabe, H., Arima, K., and Beppu, T. (1981) J. Biochem. 89, 463-472
2. Kakutani, T., Watanabe, H., Arima, K., and Beppu, T. (1981) J. Biochem. 89, 453-461
3. Godden, J. W., Turley, S., Teller, D. C., Adman, E. T., Liu, M. Y., Payne, W. J., and and LeGall, J. (1991) Science 253, 438-442
4. Libby, E., and Averill, B. A. (1992) Biochem. Biophys. Res. Commun. 187, 1529-1535
5. Abraham, Z. H. L., Lowe, D. J., and Smith, B. E. (1993) Biochem. J. 295, 587-593
6. Kukimoto, M., Nishiyama, M., Murphy, M. E. P., Turley, S., Adman, E. T., Horinouchi, S., and Beppu, T. (1994) Biochemistry 33, 5246-5252
7. Suzuki, S., Kohzawa, T., Deligeer, Yamaguchi, K., Nakamura, N., Shidara, S., Kobayashi, K., Takagawa, S. (1994) J. Am. Chem. Soc. 116, 11145-11146
8. Hulse, C. L., and Averill, B. A. (1989) J. Am. Chem. Soc. 111, 2322-2323
9. Coyne, M. S., Arunakumari, A., Averill, B. A., and Tiedje, J. M. (1989) Appl. Environ. Microbiol. 55, 2924-2931
10. Fulop, V., Moir, J. W. B., Ferguson, S. J., and Hajdu, J. (1995) Cell 81, 369-377
11. Averill, B. A. (1996) Chem. Rev. 96, 2951-2964
12. Halfen, J. A., and Tolman, W. B. (1994) J. Am. Chem. Soc. 116, 5475-5476
13. Halfen, J. A., Mahapatra, S., Wilkinson, E. C., Gengenbach, A. J., Young, V. G., Que, L., and Tolman, W. B. (1996) J. Am. Chem. Soc. 118, 763-776
14. Tolman, W. B. (1991) Inorg. Chem. 30, 4877-4880
15. Jackson, M. A., Tiedje, J. M., and Averill, B. A. (1991) FEBS Lett. 291, 41-44
16. Howes, B. D., Abraham, Z. H. L., Lowe, D. J., Brüser, T., Eady, R. R., and Smith, B. E. (1994) Biochemistry 33, 3171-3177
17. Kim, C. H., and Hollocher, T. C. (1984) J. Biol. Chem. 259, 2092-2099
18. Adman, E. T., Godden, J. W., and Turley, S. (1995) J. Biol. Chem. 270, 27458-27474
19. Strange, R. W., Dodd, F. E., Abraham, Z. H. L., Grossman, J. G., Brüser, T., Eady, R. R., Smith, B. E., and Hasnain, S. S. (1995) Nat. Struct. Biol. 2, 287-292
20. Nishiyama, M., Suzuki, J., Kukimoto, M., Ohnuki, T., Horinouchi, S., and Beppu, T. (1993) J. Gen. Microbiol. 139, 725-733
21. Turley, S., Adman, E. T., Sieker, L. C., Liu, M.-Y., Payne, W. J., and LeGall, J. (1988) J. Mol. Biol. 200, 417-419
22. Otwinowski, Z. (1993) in Proceedings of the CCP4 Study Weekend (Sawyer, L., Evans, P. R., and Leslie, A. G. W., eds), pp. 87-91, United Kingdom Science and Engineering Research Council Daresbury Laboratory, Daresbury, UK
23. Higashi, T. (1990) J. Appl. Cryst. 23, 253-257
24. Murphy, M. E. P., Turley, S., Kukimoto, M., Nishiyama, M., Horinouchi, S., Sasaki, H., Tanokura, M., and Adman, E. T. (1995) Biochemistry 34, 12107-12117
25. Brünger, A. T. (1992) Nature 355, 472-475
26. Brünger, A. T. (1990) X-PLOR, Version 3.1, Yale University, New Haven, CT
27. Engh, R. A., and Huber, R. (1991) Acta Crystallogr. Sec. A 47, 392-400
28. Jones, T. A., Zou, J.-Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. Sec. A 47, 110-119
29. Collaborative Computational Project, Number 4 (1994) Acta Crystallogr. Sec. D 50, 760-763
30. Laskowski, R. A., Moss, D. S., and Thornton, J. M. (1993) J. Mol. Biol. 231, 1049-1067
31. Kraulis, P. (1991) J. Appl. Cryst. 24, 946-950
32. Arnez, J. G. (1994) J. Appl. Cryst. 27, 649-653
33. Murphy, M. E. P., Lindley, P. F., and Adman, E. T. (1997) Proc. Sci. 6, 761-770
34. Peters-Libeu, C. A., and Adman, E. T. (1997) Biochemistry, in press
35. Merritt, E. A., and Murphy, M. E. P. (1994) Acta Crystallogr. Sec. D 50, 869-873
36. Tolman, W. B., Carrier, S. M., Ruggiero, C. E., Anthroline, W. E., and Whittker, J. W. (1993) in Bioinorganic Chemistry of Copper (Karlin, K. D., and Tykelar, Z., eds) p. 406, Chapman and Hall, Inc., New York
37. Stibrany, R. T., Potenza, J. A., and Schugar, H. J. (1996) Inorganic Chimica Acta 243, 33-37
38. Argos, P., Garavito, R. M., Eventoff, W., Rossmann, M. G., and Branden, C. I. (1978) J. Mol. Biol. 126, 141-158
39. Gomis-Ruth, F.-X., Grams, F., Yiallouros, I., Nar, H., Kusthardt, U., Zwilling, R., Bode, W., and Stocker, W. (1994) J. Biol. Chem. 269, 17111-17117
40. Dodd, F. E., Hasnain, S. S., Abraham, Z. H. L., Eady, R. R., and Smith, B. E. (1997) Acta Crystallogr. Sec. D 53, 406-418