Efficient construction of a large collection of phage-displayed combinatorial peptide libraries

Combinatorial Chemistry and High Throughput Screening

Volumn 8, Issue 6, 2005, Pages 545-551

  Scholle, Michael D ^a   Kehoe, John W ^a   Kay, Brian K ^a  

^a ARGONNE NATIONAL LABORATORY   (United States)

Author keywords

Bacteriophage M13; Combinatorial peptides; Kunkel mutagenesis; Peptide libraries; Reduced codon sets

Indexed keywords

AMBER; CIRCULAR DNA; DOUBLE STRANDED DNA; HETERODUPLEX; PEPTIDE LIBRARY; SINGLE STRANDED DNA;

BACTERIOPHAGE; COMBINATORIAL CHEMISTRY; ELECTROPORATION; ESCHERICHIA COLI; MOLECULAR CLONING; MUTAGENESIS; NONHUMAN; PHAGEMID; PRIORITY JOURNAL; REVIEW; STOP CODON;

AMINO ACID SEQUENCE; BACTERIOPHAGE M13; BASE SEQUENCE; COMBINATORIAL CHEMISTRY TECHNIQUES; DNA PRIMERS; DNA, RECOMBINANT; GENETIC VECTORS; MOLECULAR SEQUENCE DATA; PEPTIDE LIBRARY;

ESCHERICHIA COLI;

EID: 24144500637     PISSN: 13862073     EISSN: None     Source Type: Journal    
DOI: 10.2174/1386207054867337     Document Type: Review

References (38)

1. Roberts, R.W., Szostak, J.W. Proc. Natl. Acad. Sci. USA 1997, 94, 12297.
2. Nemoto, N., Miyamoto-Sato, E., Husimi, Y., Yanagawa, H. FEBS Lett. 1997, 414, 405.
3. Hanes, J., Jermutus, L., Pluckthun, A. Methods Enzymol. 2000, 328, 404.
4. Hoess, R.H. Chem. Rev. 2001, 101, 3205.
5. Smith, G.P. Science 1985, 225, 1315.
6. Smith, G.P., Scott, J.K. Methods Enzymol. 1993, 217, 228.
7. Smith, G.P,. Petrenko, V.A. Chem. Rev. 1997, 97, 391.
8. Sidhu, S.S., Lowman, H.B., Cunningham, B.C., Wells, J.A. Methods Enzymol. 2000, 328, 333.
9. Sparks, A.B., Quilliam, L.A., Thorn, J.M., Der, C.J., Kay, B.K. J. Biol. Chem. 1994, 269, 23853.
10. Felici, F., Castagnoli, L., Musacchio, A., Jappelli, R., Cesareni, G. J. Mol. Biol. 1991, 222, 301.
11. Kay, B.K., Hamilton, P.T. Comb. Chem. High Throughput Screen. 2001, 4, 535.
12. Tong, A.H., Drees, B., Nardelli, G., Bader, G.D., Brannetti, B., Castagnoli, L., Evangelista, M., Ferracuti, S., Nelson, B., Paoluzi, S., Quondam, M., Zucconi, A., Hogue, C.W., Fields, S., Boone, C., Cesareni, G. Science 2002, 295, 321.
13. Wang, X.G., Kidder, J.M., Scagliotti, J.P., Klempner, M.S., Noring, R., Hu, L.T. J. Bacteriol. 2004, 186, 51.
14. Landgraf, C., Panni, S., Montecchi-Palazzi, L., Castagnoli, L., Schneider-Mergener, J., Volkmer-Engert, R., Cesareni, G. PLoS Biol. 2004, 2, E14.
15. Bitto, E., McKay, D.B. J. Biol. Chem. 2003, 278, 49316.
16. Castillo, J., Goodson, B., Winter, J. J. Immunol. Methods 2001, 257, 117.
17. McCafferty, J., Griffiths, A.D., Winter, G., Chiswell, D.J. Nature 1990, 348, 552.
18. Schier, R., Marks, J.D., Wolf, E.J., Apell, G., Wong, C., McCartney, J.E., Bookman, M.A., Huston, J.S., Houston, L.L., Weiner, L.M. et al. Immunotechnology 1995, 1, 73.
19. Binz, H.K., Stumpp, M.T., Forrer, P., Amstutz, P., Pluckthun A. J. Mol. Biol. 2003, 332, 489.
20. Koide, A., Bailey, C.W., Huang, X., Koide, S. J. Mol. Biol. 1998, 284, 1141.
21. Nord, K., Nord, O., Uhlen, M., Kelley, B., Ljungqvist, C., Nygren, P.A. Eur. J. Biochem. 2001, 268, 4269.
22. Skerra, A. Biochim. Biophys. Acta 2000, 1482, 337.
23. Xu, L., Aha, P., Gu, K., Kuimelis, R.G., Kurz, M., Lam, T., Lim, A.C., Liu, H., Lohse, P.A., Sun, L., Weng, S., Wagner, R.W., Lipovsek, D. Chem. Biol. 2002, 9, 933.
24. Karatan, E., Merguerian, M., Han, Z., Scholle, M.D., Koide, S., Kay, B.K. Chem. Biol. 2004, 11, 835.
25. Kay, B.K., Adey, N.B., He, Y.S., Manfredi, J.P., Mataragnon, A.H., Fowlkes, D.M. Gene 1993, 128, 59.
26. Kunkel, T.A., Roberts, J.D., Zakour, R.A. Methods Enzymol. 1987, 154, 367.
27. Zoller, M.J., Smith, M. Methods Enzymol. 1987, 154, 329.
28. Adey, N.B., Guo, R., Hanson, H.L., Rider, J.E., Sparks, A.B., Kay, B.K. Meth. Mol. Cell Biol. 1996, 6, 34.
29. Rodi, D.J., Soares, A.S., Makowski, L. J. Mol. Biol. 2002, 322, 1039.
30. Rodi, D.J., Mandava, S., Makowski, L. Bioinformatics 2004, 20, 3481.
31. Scholle, M.D., Collart, F.R., Kay, B.K. Protein Expr. Purif. 2004, 37, 243.
32. Bogan, A.A., Thorn, K.S. J. Mol. Biol. 1998, 280, 1.
33. Ivanov, I., Link, J., Ippolito, G.G., Schroeder, H.W. In: Capra, J.D., Zanetti, M. (eds.) The Antibodies 2002, Vol. 7. T&F STM p 228.
34. Fellouse, F.A., Wiesmann, C., Sidhu, S.S. Proc. Natl. Acad. Sci. USA 2004, 101, 12467.
35. Peters, E.A., Schatz, P.J., Johnson, S.S., Dower, W.J. J. Bacteriol. 1994, 176, 4296.
36. Dower, W.J., Miller, J.F., Ragsdale, C.W. Nucleic Acids Res. 1988, 16, 6127.
37. Marks, J.D., Hoogenboom, H.R., Griffiths, A.D., Winter, G. J. Biol. Chem. 1992, 267, 16007.
38. Han, Z., Karatan, E., Scholle, M.D., McCafferty, J., Kay, B.K. Comb. Chem. High Throughput Screen. 2004, 7, 55.