A transposon-based activation-tagging population in Arabidopsis thaliana (TAMARA) and its application in the identification of dominant developmental and metabolic mutations

FEBS Letters

Volumn 579, Issue 21, 2005, Pages 4622-4628

  Schneider, Anja ^a   Kirch, Thomas ^a   Gigolashvili, Tamara ^a   Mock, Hans Peter ^b   Sonnewald, Uwe ^c   Simon, Rüdiger ^d   Flügge, Ulf Ingo ^a   Werr, Wolfgang ^a  

^a UNIVERSITY OF COLOGNE   (Germany)

^b LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

^c UNIVERSITY OF ERLANGEN NUREMBERG   (Germany)

^d HEINRICH HEINE UNIVERSITY   (Germany)

Author keywords

Activation tagging; Dominant mutation; Phenylpropanoid metabolism; Shoot development; Transposon

Indexed keywords

PHENOL DERIVATIVE; TRANSCRIPTION FACTOR;

ALLELE; ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; GENE EXPRESSION; GENE INSERTION; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; SHOOT GROWTH; TRANSPOSON; UPREGULATION;

AMINO ACID SEQUENCE; ARABIDOPSIS; CHROMOSOMES, PLANT; DNA MUTATIONAL ANALYSIS; DNA TRANSPOSABLE ELEMENTS; GENE EXPRESSION REGULATION; GENETIC MARKERS; MOLECULAR SEQUENCE DATA; MUTAGENESIS; SEQUENCE ALIGNMENT; SEQUENCE TAGGED SITES;

ARABIDOPSIS; ARABIDOPSIS THALIANA; ZEA MAYS;

EID: 24044553900     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2005.07.030     Document Type: Article

References (39)

1. The Arabidopsis Genome Initiative. (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815.
2. C. Chang, S.F. Kwok, A.B. Bleecker, and E.M. Meyerowitz Arabidopsis ethylene-response gene ETR1: similarity of product to two-component regulators Science 262 1993 539 544
3. J.T. Odell, F. Nagy, and N.H. Chua Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter Nature 313 1985 810 812
4. H. Hayashi, I. Czaja, H. Lubenow, J. Schell, and R. Walden Activation of a plant gene by T-DNA tagging: auxin-independent growth in vitro Science 258 1992 1350 1353
5. D. Weigel Activation tagging in Arabidopsis Plant Physiol. 122 2000 1003 1013
6. T. Ichikawa Sequence database of 1172 T-DNA insertion sites in Arabidopsis activation-tagging lines that showed phenotypes in T1 generation Plant J. 36 2003 421 429
7. G. Gheysen, L. Herman, P. Breyne, J. Gielen, M. Van Montagu, and A. Depicker Cloning and sequence analysis of truncated T-DNA inserts from Nicotiana tabacum Gene 94 1990 155 163
8. P. Nacry, C. Camilleri, B. Courtial, M. Caboche, and D. Bouchez Major chromosomal rearrangements induced by T-DNA transformation in Arabidopsis Genetics 149 1998 641 650
9. M.G. Aarts, P. Corzaan, W.J. Stiekema, and A. Pereira A two-element enhancer-inhibitor transposon system in Arabidopsis thaliana Mol. Gen. Genet. 247 1995 555 564
10. E. Wisman, G.H. Cardon, P. Fransz, and H. Saedler The behaviour of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis Plant Mol. Biol. 37 1998 989 999
11. E. Speulman, P.L. Metz, G. Van Arkel, B. Te Lintel Hekkert, W.J. Stiekema, and A. Pereira A two-component enhancer-inhibitor transposon mutagenesis system for functional analysis of the Arabidopsis genome Plant Cell 11 1999 1853 1866
12. A.F. Tissier, S. Marillonnet, V. Klimyuk, K. Patel, M.A. Torres, G. Murphy, and J.D. Jones Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics Plant Cell 11 1999 1841 1852
13. N. Marsch-Martinez, R. Greco, G. Van Arkel, L. Herrera-Estrella, and A. Pereira Activation tagging using the En-I maize transposon system in Arabidopsis Plant Physiol. 129 2002 1544 1556
14. M. De Block, J. Botterman, M. Van de Wiele, J. Dockx, C. Thoen, V. Gossele, N.R. Movva, C. Thompson, M. Van Montagu, and J. Leemans Engineering herbicide resistance in plants by expression of a detoxifying enzyme EMBO J. 6 1987 2513 2518
15. D.P. O'Keefe, J.M. Tepperman, C. Dean, K.J. Leto, D.L. Erbes, and J.T. Odell Plant expression of a bacterial cytochrome P450 that catalyzes activation of a sulfonylurea pro-herbicide Plant Physiol. 105 1994 473 482
16. D. Becker, E. Kemper, J. Schell, and R. Masterson New plant binary vectors with selectable markers located proximal to the left T-DNA border Plant Mol. Biol. 20 1992 1195 1197
17. B. Überlacker, and W. Werr Vectors with rare-cutter restriction enzymes sites for expression of open reading frames in transgenic plants Mol. Breeding 2 1996 293 295
18. N. Bechtold, J. Ellis, and G. Pelletier In planta Agrobacterium mediated gene transfer by infiltration of adult Arabidopsis thaliana plants C.R. Acad. Sci. 316 1993 1194 1199
19. Y.G. Liu, N. Mitsukawa, T. Oosumi, and R.F. Whittier Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR Plant J. 8 1995 457 463
20. C. Varotto, P. Pesaresi, J. Meurer, R. Oelmuller, S. Steiner-Lange, F. Salamini, and D. Leister Disruption of the Arabidopsis photosystem I gene psaE1 affects photosynthesis and impairs growth Plant J. 22 2000 115 124
21. S.F. Altschul, W. Gish, W. Miller, E.W. Myers, and D.J. Lipman Basic local alignment search tool J. Mol. Biol. 215 1990 403 410
22. H.P. Mock, W. Heller, A. Molina, B. Neubohn, H. Sandermann Jr., and B. Grimm Expression of uroporphyrinogen decarboxylase or coproporphyrinogen oxidase antisense RNA in tobacco induces pathogen defense responses conferring increased resistance to tobacco mosaic virus J. Biol. Chem. 274 1999 4231 4238
23. B.A. Krizek, and E.M. Meyerowitz The Arabidopsis homeotic genes APETALA3 and PISTILLATA are sufficient to provide the B class organ identity function Development 122 1996 11 22
24. M. Koornneef, C.J. Hanhart, and J.H. Van der Veen A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana Mol. Gen. Genet. 229 1991 57 66
25. N. Kuno, S.G. Moller, T. Shinomura, X. Xu, N.H. Chua, and M. Furuya The novel MYB protein EARLY-PHYTOCHROME-RESPONSIVE1 is a component of a slave circadian oscillator in Arabidopsis Plant Cell 15 2003 2476 2488
26. Z.Y. Wang, D. Kenigsbuch, L. Sun, E. Harel, M.S. Ong, and E.M. Tobin A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene Plant Cell 9 1997 491 507
27. R. Schaffer, N. Ramsay, A. Samach, S. Corden, J. Putterill, I.A. Carre, and G. Coupland The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering Cell 93 1998 1219 1229
28. R.A. Dixon, and N.L. Paiva Stress-induced phenylpropanoid metabolism Plant Cell 7 1995 1085 1097
29. J. Memelink The use of genetics to dissect plant secondary pathways Curr. Opin. Plant Biol. 8 2005 230 235
30. R. Stracke, M. Werber, and B. Weisshaar The R2R3-MYB gene family in Arabidopsis thaliana Curr. Opin. Plant Biol. 4 2001 447 456
31. K. Wilson, D. Long, J. Swinburne, and G. Coupland A Dissociation insertion causes a semidominant mutation that increases expression of TINY, an Arabidopsis gene related to APETALA2 Plant Cell 8 1996 659 671
32. Kunze, R., and Weil, C.F. (2002) In: Mobile DNA II (Craig, N.L., Ed.) The hAT and CACTA Superfamilies of Plant Transposons (pp. 565-610). Washington, DC.
33. T. Kirch, R. Simon, M. Grunewald, and W. Werr The DORNRÖSCHEN/ ENHANCER OF SHOOT REGENERATION1 gene of Arabidopsis acts in the control of meristem cell fate and lateral organ development Plant Cell 15 2003 694 705
34. Z.Y. Wang, and E.M. Tobin Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression Cell 93 1998 1207 1217
35. M. Ruegger, and C. Chapple Mutations that reduce sinapoylmalate accumulation in Arabidopsis thaliana define loci with diverse roles in phenylpropanoid metabolism Genetics 159 2001 1741 1749
36. J. Paz-Ares, U. Wienand, P.A. Peterson, and H. Saedler Molecular cloning of the c1 locus of Zea mays: a locus regulating the anthocyanin pathway EMBO J. 5 1986 829 833
37. F. Quattrocchio, J. Wing, K. Van der Woude, E. Souer, N. De Vetten, J. Mol, and R. Koes Molecular analysis of the anthocyanin2 gene of petunia and its role in the evolution of flower color Plant Cell 11 1999 1433 1444
38. J.O. Borevitz, Y. Xia, J. Blount, R.A. Dixon, and C. Lamb Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis Plant Cell 12 2000 2383 2394
39. H. Jin, E. Cominelli, P. Bailey, A. Parr, F. Mehrtens, J. Jones, C. Tonelli, B. Weisshaar, and C. Martin Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis EMBO J. 19 2000 6150 6161