메뉴 건너뛰기




Volumn 49, Issue 3, 2005, Pages 407-415

Characterization of bacterial community structure in rhizosphere soil of grain legumes

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RNA 16S;

EID: 23744516519     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-004-0041-7     Document Type: Article
Times cited : (70)

References (31)
  • 1
    • 0035757268 scopus 로고    scopus 로고
    • Streptomyces plicatus as a model biocontrol agent
    • EF Abd-Allah 2001 Streptomyces plicatus as a model biocontrol agent Folia Microbiol (Praha) 46 309 314
    • (2001) Folia Microbiol (Praha) , vol.46 , pp. 309-314
    • Abd-Allah, E.F.1
  • 2
    • 0026807035 scopus 로고
    • Use of denaturing gradient gel electrophoresis to study conformational transitions in nucleic acids
    • ES Abrams VP Stanton 1992 Use of denaturing gradient gel electrophoresis to study conformational transitions in nucleic acids Methods Enzymol 212 71 104
    • (1992) Methods Enzymol , vol.212 , pp. 71-104
    • Abrams, E.S.1    Stanton, V.P.2
  • 3
    • 0035163562 scopus 로고    scopus 로고
    • Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA
    • BM Duineveld GA Kowalchuk A Keijzer JD Van Elsas JA Van Veen 2001 Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA Appl Environ Microbiol 67 172 178
    • (2001) Appl Environ Microbiol , vol.67 , pp. 172-178
    • Duineveld, B.M.1    Kowalchuk, G.A.2    Keijzer, A.3    Van Elsas, J.D.4    Van Veen, J.A.5
  • 4
    • 0031909733 scopus 로고    scopus 로고
    • Phylogeny of the main bacterial 16S rRNA sequences in Drenste a grassland soils (The Netherlands)
    • A Felske A Wolterink R Van Lis ADL Akkermans 1998 Phylogeny of the main bacterial 16S rRNA sequences in Drenste A grassland soils (The Netherlands) Appl Environ Microbiol 64 871 879
    • (1998) Appl Environ Microbiol , vol.64 , pp. 871-879
    • Felske, A.1    Wolterink, A.2    Van Lis, R.3    Akkermans, A.D.L.4
  • 5
    • 34250088572 scopus 로고
    • Microenvironments of soil microorganisms
    • RC Foster 1988 Microenvironments of soil microorganisms Biol Fertil Soils 6 189 203
    • (1988) Biol Fertil Soils , vol.6 , pp. 189-203
    • Foster, R.C.1
  • 6
    • 0036098194 scopus 로고    scopus 로고
    • Do mixed species improved fallows increase above- and below-ground resources capture?
    • SM Gathumbi JK Ndufa KE Giller G Cadisch 2002 Do mixed species improved fallows increase above- and below-ground resources capture? Agron J 94 518 526
    • (2002) Agron J , vol.94 , pp. 518-526
    • Gathumbi, S.M.1    Ndufa, J.K.2    Giller, K.E.3    Cadisch, G.4
  • 7
    • 0036315154 scopus 로고    scopus 로고
    • Antagonistic effects of Streptomyces violaceusniger strain G10 on Fusarium oxysporum f.sp.cubense race 4: Indirect evidence for the role of antibiosis in the antagonistic process
    • K Getha S Vikineswary 2002 Antagonistic effects of Streptomyces violaceusniger strain G10 on Fusarium oxysporum f.sp.cubense race 4: indirect evidence for the role of antibiosis in the antagonistic process J Ind Microbiol Biot 28 303 310
    • (2002) J Ind Microbiol Biot , vol.28 , pp. 303-310
    • Getha, K.1    Vikineswary, S.2
  • 8
    • 0034948012 scopus 로고    scopus 로고
    • Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis
    • NCM Gomes H Heuer J Schönfeld R Costa L Hagler-Mendonca K Smalla 2001 Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis Plant Soil 232 167 180
    • (2001) Plant Soil , vol.232 , pp. 167-180
    • Gomes, N.C.M.1    Heuer, H.2    Schönfeld, J.3    Costa, R.4    Hagler-Mendonca, L.5    Smalla, K.6
  • 10
    • 0032890117 scopus 로고    scopus 로고
    • Soil microbial community structure: Effects of substrate loading rates
    • BS Griffiths K Ritz N Ebblewhite G Dobson 1999 Soil microbial community structure: effects of substrate loading rates Soil Biol Biochem 31 145 153
    • (1999) Soil Biol Biochem , vol.31 , pp. 145-153
    • Griffiths, B.S.1    Ritz, K.2    Ebblewhite, N.3    Dobson, G.4
  • 11
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for co-extraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
    • RI Griffiths AS Whiteley AG O'Donnell MJ Bailey 2000 Rapid method for co-extraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition Appl Environ Microbiol 66 5488 5491
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 12
    • 0027144851 scopus 로고
    • Nitrogen fixation, accumulation of soil nitrogen and nitrogen balance for some field-grown legume crops
    • RJ Haynes RJ Martin KM Goh 1993 Nitrogen fixation, accumulation of soil nitrogen and nitrogen balance for some field-grown legume crops Field Crop Res 35 85 92
    • (1993) Field Crop Res , vol.35 , pp. 85-92
    • Haynes, R.J.1    Martin, R.J.2    Goh, K.M.3
  • 13
    • 0002912874 scopus 로고    scopus 로고
    • Application of denaturing gradient gel electrophoresis and temperature gradient gel electrophoresis for studying soil microbial communities
    • Marcel Dekker New York
    • H Heuer K Smalla 1997 Application of denaturing gradient gel electrophoresis and temperature gradient gel electrophoresis for studying soil microbial communities JD Van Elsas JT Trevors EMH Wellington Modern Soil Microbiology Marcel Dekker New York 353 373
    • (1997) Modern Soil Microbiology , pp. 353-373
    • Heuer, H.1    Smalla, K.2    Van Elsas, J.D.3    Trevors, J.T.4    Wellington, E.M.H.5
  • 14
    • 0002233819 scopus 로고
    • Neue Ergebnisse zum Mechanismus der Silberfärbung
    • Technische Universität München Munich
    • J Heukeshoven R Dernick 1986 Neue Ergebnisse zum Mechanismus der Silberfärbung BJ Radola Electrophorese Forum'86 Technische Universität München Munich 22 27
    • (1986) Electrophorese Forum'86 , pp. 22-27
    • Heukeshoven, J.1    Dernick, R.2    Radola, B.J.3
  • 15
    • 0034881671 scopus 로고    scopus 로고
    • Rhizobium population dynamics in the pea rhizosphere of rhizobial inoculant strain applied in different formulations
    • RK Hynes DC Jans E Bremer NZ Lupwayi WA Rice GW Clayton MM Collins 2001 Rhizobium population dynamics in the pea rhizosphere of rhizobial inoculant strain applied in different formulations Can J Microbiol 47 595 600
    • (2001) Can J Microbiol , vol.47 , pp. 595-600
    • Hynes, R.K.1    Jans, D.C.2    Bremer, E.3    Lupwayi, N.Z.4    Rice, W.A.5    Clayton, G.W.6    Collins, M.M.7
  • 16
    • 0032974721 scopus 로고    scopus 로고
    • Mapping of sugar and amino acid availability in soil around roots with bacterial sensors of sucrose and tryptophan
    • CH Jaeger III SE Lindow W Miller E Clark MK Firestone 1999 Mapping of sugar and amino acid availability in soil around roots with bacterial sensors of sucrose and tryptophan Appl Environ Microbiol 65 2685 2690
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2685-2690
    • Jaeger III, C.H.1    Lindow, S.E.2    Miller, W.3    Clark, E.4    Firestone, M.K.5
  • 17
    • 0023504650 scopus 로고
    • Adsorption of DNA to sand and variable degradation rates of adsorbed DNA
    • M Lorenz W Wackernagel 1987 Adsorption of DNA to sand and variable degradation rates of adsorbed DNA Appl Environ Microbiol 53 2948 2952
    • (1987) Appl Environ Microbiol , vol.53 , pp. 2948-2952
    • Lorenz, M.1    Wackernagel, W.2
  • 19
    • 0032916067 scopus 로고    scopus 로고
    • Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures
    • AE McCaig LA Glover JI Prosser 1999 Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures Appl Environ Microbiol 65 1721 1730
    • (1999) Appl Environ Microbiol , vol.65 , pp. 1721-1730
    • McCaig, A.E.1    Glover, L.A.2    Prosser, J.I.3
  • 20
    • 0033818198 scopus 로고    scopus 로고
    • Variation of microbial rhizosphere communities in response to crop species, soil origin and inoculation with Sinorhizobium meliloti L33
    • R Miethling G Wieland H Backhaus CC Tebbe 2000 Variation of microbial rhizosphere communities in response to crop species, soil origin and inoculation with Sinorhizobium meliloti L33 Microb Ecol 41 43 56
    • (2000) Microb Ecol , vol.41 , pp. 43-56
    • Miethling, R.1    Wieland, G.2    Backhaus, H.3    Tebbe, C.C.4
  • 21
    • 0034881636 scopus 로고    scopus 로고
    • Competition and antibiosis in the biological control of potato scab
    • EC Neeno-Eckwall LL Kinkel JL Schottel 2001 Competition and antibiosis in the biological control of potato scab Can J Microbiol 47 332 340
    • (2001) Can J Microbiol , vol.47 , pp. 332-340
    • Neeno-Eckwall, E.C.1    Kinkel, L.L.2    Schottel, J.L.3
  • 22
    • 0342868796 scopus 로고    scopus 로고
    • Characterization of the dominant and rare members of a young Hawaiian soil bacterial community with small-subunit ribosomal DNA amplified from DNA fractionated on the basis of its guanine and cytosine composition
    • K Nüsslein JM Tiedje 1998 Characterization of the dominant and rare members of a young Hawaiian soil bacterial community with small-subunit ribosomal DNA amplified from DNA fractionated on the basis of its guanine and cytosine composition Appl Environ Microbiol 64 1283 1289
    • (1998) Appl Environ Microbiol , vol.64 , pp. 1283-1289
    • Nüsslein, K.1    Tiedje, J.M.2
  • 23
    • 0002868950 scopus 로고
    • Principles and concepts pertaining to organization at the community level
    • Saunders College Publishing, Philadelphia
    • Odum, EP (1971) Principles and concepts pertaining to organization at the community level. In: Fundamentals of Ecology. Saunders College Publishing, Philadelphia, pp 140-161
    • (1971) Fundamentals of Ecology , pp. 140-161
    • Odum, E.P.1
  • 25
    • 0033861401 scopus 로고    scopus 로고
    • Effect of field inoculation with Sinorhizobium meliloti L33 on the composition of bacterial communities in rhizospheres of target plant (Medicago sativa) and a non-target plant (Chenopodium album)-linking of 16S rRNA gene-based single-strand conformation polymorphism community profiles to the diversity of cultivated bacteria
    • F Schweiger CC Tebbe 2000 Effect of field inoculation with Sinorhizobium meliloti L33 on the composition of bacterial communities in rhizospheres of target plant (Medicago sativa) and a non-target plant (Chenopodium album)-linking of 16S rRNA gene-based single-strand conformation polymorphism community profiles to the diversity of cultivated bacteria Appl Environ Microbiol 66 3556 3565
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3556-3565
    • Schweiger, F.1    Tebbe, C.C.2
  • 26
    • 0032771180 scopus 로고    scopus 로고
    • Soil amendment effects of rape (Brassica napus) residues on pea rhizosphere bacteria
    • JS Scott GR Knudsen 1999 Soil amendment effects of rape (Brassica napus) residues on pea rhizosphere bacteria Soil Biol Biochem 31 1435 1441
    • (1999) Soil Biol Biochem , vol.31 , pp. 1435-1441
    • Scott, J.S.1    Knudsen, G.R.2
  • 27
    • 0035487320 scopus 로고    scopus 로고
    • Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: Plant-dependent enrichment and seasonal shifts revealed
    • K Smalla G Wieland A Buchner A Zock J Parzy S Kaiser N Roskot H Heuer G Berg 2001 Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed Appl Environ Microbiol 67 4742 4751
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4742-4751
    • Smalla, K.1    Wieland, G.2    Buchner, A.3    Zock, A.4    Parzy, J.5    Kaiser, S.6    Roskot, N.7    Heuer, H.8    Berg, G.9
  • 28
    • 0035433191 scopus 로고    scopus 로고
    • Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergeneric spacer-targeted PCR
    • Z Tan T Hurek P Vinuesa P Muller JK Ladha B Reinhold-Hurek 2001 Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergeneric spacer-targeted PCR Appl Environ Microbiol 67 3655 3664
    • (2001) Appl Environ Microbiol , vol.67 , pp. 3655-3664
    • Tan, Z.1    Hurek, T.2    Vinuesa, P.3    Muller, P.4    Ladha, J.K.5    Reinhold-Hurek, B.6
  • 29
    • 0345195995 scopus 로고    scopus 로고
    • Fate and activity of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
    • F von Wintzingerode UB Göbel E Stackerbrandt 1997 Fate and activity of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis FEMS Microbiol Rev 21 213 229
    • (1997) FEMS Microbiol Rev , vol.21 , pp. 213-229
    • Von Wintzingerode, F.1    Göbel, U.B.2    Stackerbrandt, E.3
  • 30
    • 0028091275 scopus 로고
    • The regulation of ribosomal RNA synthesis and bacterial cell growth
    • R Wagner 1994 The regulation of ribosomal RNA synthesis and bacterial cell growth Arch Microbiol 161 100 106
    • (1994) Arch Microbiol , vol.161 , pp. 100-106
    • Wagner, R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.