Evolution and expression of Translationally Controlled Tumour Protein (TCTP) of fish

Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

Volumn 142, Issue 1, 2005, Pages 8-17

  Venugopal, Thayanithy ^a,b  

^a MADURAI KAMARAJ UNIVERSITY   (India)

^b UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

Author keywords

Evolution; Gene expression; Labeo rohita; Ortholog; Phylogeny; Protein kinase PKR; RNA secondary structure; Sequence homology; Three dimensional structure; Translationallly controlled tumour protein

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; FISH PROTEIN; MESSENGER RNA; NUCLEOTIDE; PROTEIN KINASE; TRANSLATIONALLY CONTROLLED TUMOR PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; BRAIN; CONTROLLED STUDY; ENZYME SUBSTRATE; EUKARYOTE; FEMALE; METAZOON; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PHYLOGENY; PLANT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN ISOLATION; RNA STRUCTURE; SEQUENCE ANALYSIS; TELEOST;

ANIMALIA; EUKARYOTA; LABEO ROHITA; MAMMALIA; METAZOA; TELEOSTEI;

EID: 23444451601     PISSN: 10964959     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpc.2005.04.011     Document Type: Article

References (43)

1. S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
2. A. Bachmair, D. Finley, and A. Varshavsky In vivo half-life of a protein is a function of its amino-terminal residue Science 234 1986 179 186
3. R. Benndorf, P. Nurnberg, and H. Bielka Growth phase-dependent proteins of the Ehrlich ascites tumor analyzed by one- and two-dimensional electrophoresis Exp. Cell Res. 174 1988 130 138
4. R. Bheekha-Escura, D.W. MacGlashan, J.M. Langdon, and S.M. MacDonald Human recombinant histamine-releasing factor activates human eosinophils and the eosinophilic cell line, AML14-3D10 Blood 96 2000 2191 2198
5. J. Bhisutthibhan, X.Q. Pan, P.A. Hossler, D.J. Walker, C.A. Yowell, J. Carlton, J.B. Dame, and S.R. Meshnick The Plasmodium falciparum translationally controlled tumor protein homolog and its reaction with the antimalarial drug artemisinin J. Biol. Chem. 273 1998 16192 16198
6. U.A. Bommer, and B.J. Thiele The translationally controlled tumour protein (TCTP) Int. J. Biochem. Cell Biol. 36 2004 379 385
7. U.A. Bommer, A.V. Borovjagin, M.A. Greagg, I.W. Jeffrey, P. Russell, K.G. Laing, M. Lee, and M.J. Clemens The mRNA of the translationally controlled tumor protein P23/TCTP is a highly structured RNA, which activates the dsRNA-dependent protein kinase PKR RNA 8 2002 478 496
8. C. Bonnet, E. Perret, X. Dumont, A. Picard, D. Caput, and G. Lenaers Identification and transcription control of fission yeast genes repressed by an ammonium starvation growth arrest Yeast 16 2000 23 33
9. C. Cans, B.J. Passer, V. Shalak, V. Nancy-Portebois, V. Crible, N. Amzallag, D. Allanic, R. Tufino, M. Argentini, D. Moras, G. Fiucci, B. Goud, M. Mirande, R. Amson, and A. Telerman Translationally controlled tumor protein acts as a guanine nucleotide dissociation inhibitor on the translation elongation factor eEF1A Proc. Natl. Acad. Sci. U. S. A. 100 2003 13892 13897
10. S.T. Chitpatima, S. Makrides, R. Bandyopadhyay, and G. Brawerman Nucleotide sequence of a major messenger RNA for a 21 kilodalton polypeptide that is under translational control in mouse tumor cells Nucleic Acids Res. 16 1988 2350
11. P. Chomczynski, and N. Sacchi Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction Anal. Biochem. 162 1987 156 159
12. V. Ermolayev, W. Weschke, and R. Manteuffel Comparison of Al-induced gene expression in sensitive and tolerant soybean cultivars J. Exp. Bot. 54 2003 2745 2756
13. Y. Gachet, S. Tournier, M. Lee, A. Lazaris-Karatzas, T. Poulton, and U.A. Bommer The growth-related, translationally controlled protein P23 has properties of a tubulin binding protein and associates transiently with microtubules during the cell cycle J. Cell Sci. 112 1999 1257 1271
14. A. Gattiker, E. Gasteiger, and A. Bairoch ScanProsite: a reference implementation of a PROSITE scanning tool Appl. Bioinformatics 1 2002 107 108
15. B. Gross, M. Gaestel, H. Bohm, and H. Bielka cDNA sequence coding for a translationally controlled human tumor protein Nucleic Acids Res. 17 1989 8367
16. Y. Guermeur, C. Geourjon, P. Gallinari, and G. Deleage Improved performance in protein secondary structure prediction by inhomogeneous score combination Bioinformatics 15 1999 413 421
17. N. Guex, and M.C. Peitsch SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling Electrophoresis 18 1997 2714 2723
18. D.G. Higgins, J.D. Thompson, and T.J. Gibson Using CLUSTAL for multiple sequence alignments Methods Enzymol. 266 1996 383 402
19. J. Jung, M. Kim, M.J. Kim, J. Kim, J. Moon, J.S. Lim, and K. Lee Translationally controlled tumor protein interacts with the third cytoplasmic domain of Na,K-ATPase α-subunit and inhibits the pump activity in HeLa cells J. Biol. Chem. 279 2004 49868 49875
20. H.S. Kang, M.J. Lee, H. Song, S.H. Han, Y.M. Kim, J.Y. Im, and I. Choi Molecular identification of IgE-dependent histamine-releasing factor as a B cell growth factor J. Immunol. 166 2001 6545 6554
21. M. Kim, Y. Jung, K. Lee, and C. Kim Identification of the calcium binding sites in translationally controlled tumor protein Arch. Pharm. Res. 23 2000 633 636
22. L.N. Kinch, and N.V. Grishin Evolution of protein structures and functions Curr. Opin. Struct. Biol. 12 2002 400 408
23. R. Leinonen, F.G. Diez, D. Binns, W. Fleischmann, R. Lopez, and R. Apweiler UniProt archive Bioinformatics 20 2004 3236 3237
24. H. Liu, H.W. Peng, Y.S. Cheng, H.S. Yuan, and H.F. Yang-Yen Stabilization and enhancement of the antiapoptotic activity of mcl-1 by TCTP Mol. Cell. Biol. 25 2005 3117 3126
25. S.M. MacDonald, J. Bhisutthibhan, T.A. Shapiro, S.J. Rogerson, T.E. Taylor, M. Tembo, J.M. Langdon, and S.R. Meshnick Immune mimicry in malaria: Plasmodium falciparum secretes a functional histamine-releasing factor homolog in vitro and in vivo Proc. Natl. Acad. Sci. U. S. A. 98 2001 10829 10832
26. H.V. Nielsen, A.H. Johnsen, J.C. Sanchez, D.F. Hochstrasser, and P.O. Schiotz Identification of a basophil leukocyte interleukin-3-regulated protein that is identical to IgE-dependent histamine-releasing factor Allergy 53 1998 642 652
27. K. Oikawa, T. Ohbayashi, J. Mimura, Y. Fujii-Kuriyama, S. Teshima, K. Rokutan, K. Mukai, and M. Kuroda Dioxin stimulates synthesis and secretion of IgE-dependent histamine-releasing factor Biochem. Biophys. Res. Commun. 290 2002 984 987
28. B. Rost, G. Yachdav, and J. Liu The PredictProtein server Nucleic Acids Res. 32 2004 W321 W326
29. J. Sambrook, E.F. Fritsch, and T. Maniatis Molecular Cloning: A Laboratory Manual 1989 Cold Spring Harbor laboratory press NY
30. M. Sipiczki Where does fission yeast sit on tree of life? Genome Biol. 1 2000 10111 10114
31. S.R. Sturzenbaum, P. Kille, and A.J. Morgan Identification of heavy metal induced changes in the expression patterns of the translationally controlled tumour protein (TCTP) in the earthworm Lumbricus rubellus Biochim. Biophys. Acta 1398 1998 294 304
32. P. Thaw, N.J. Baxter, A.M. Hounslow, C. Price, J.P. Waltho, and C.J. Craven Structure of TCTP reveals unexpected relationship with guanine nucleotide-free chaperones Nat. Struct. Biol. 8 2001 701 704
33. H. Thiele, M. Berger, A. Skalweit, and B.J. Thiele Expression of the gene and processed pseudogenes encoding the human and rabbit translationally controlled tumour protein (TCTP) Eur. J. Biochem. 267 2000 5473 5481
34. G. Thomas, and H. Luther Transcriptional and translational control of cytoplasmic proteins after serum stimulation of quiescent Swiss 3T3 cells Proc. Natl. Acad. Sci. U. S. A. 78 1981 5712 5716
35. J.W. Thornton, and R. DeSalle Gene family evolution and homology: genomics meets phylogenetics Annu. Rev. Genomics Hum. Genet. 1 2000 41 73
36. A.E. Todd, C.A. Orengo, and J.M. Thornton Evolution of function in protein superfamilies, from structural perspective J. Mol. Biol. 307 2001 113 1143
37. M. Tuynder, G. Fiucci, S. Prieur, A. Lespagnol, A. Geant, S. Beaucourt, D. Duflaut, S. Besse, L. Susini, J. Cavarelli, D. Moras, R. Amson, and A. Telerman Translationally controlled tumor protein is a target of tumor reversion Proc. Natl. Acad. Sci. U. S. A. 101 2004 15364 15369
38. A. Xu, A.R. Bellamy, and J.A. Taylor Expression of translationally controlled tumour protein is regulated by calcium at both the transcriptional and post-transcriptional level Biochem. J. 342 1999 683 689
39. L. Yan, K. Fei, D. Bridge, and M.P. Sarras Jr. A cnidarian homologue of translationally controlled tumor protein (P23/TCTP) Dev. Genes Evol. 210 2000 507 511
40. F.R. Yarm Plk phosphorylation regulates the microtubule-stabilizing protein TCTP Mol. Cell. Biol. 22 2002 6209 6221
41. R. Yenofsky, I. Bergmann, and G. Brawerman Proc. Natl. Acad. Sci. U. S. A. 79 1982 5876 5880
42. Z. Zhu, J.J. Dumas, S.E. Lietzke, and D.G. Lambright A helical turn motif in Mss4 is a critical determinant of Rab binding and nucleotide release Biochemistry 40 2001 3027 3036
43. M. Zuker Mfold web server for nucleic acid folding and hybridization prediction Nucleic Acids Res. 31 2003 3406 3415