-
1
-
-
10344260141
-
Frequent oligonucleotides and peptides of the Haemophilus influenzae genome
-
Karlin,S., Mrazek,J. and Campbell,A.M. (1996) Frequent oligonucleotides and peptides of the Haemophilus influenzae genome. Nucleic Acids Res., 24, 4263-4272.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 4263-4272
-
-
Karlin, S.1
Mrazek, J.2
Campbell, A.M.3
-
2
-
-
0032843459
-
Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes
-
Rocha,E.P., Danchin,A. and Viari,A. (1999) Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes. Mol. Biol. Evol., 16, 1219-1230.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1219-1230
-
-
Rocha, E.P.1
Danchin, A.2
Viari, A.3
-
3
-
-
0019193111
-
An eleven-base-pair sequence determines the specificity of DNA uptake in Haemophilus transformation
-
Danner,D.B., Deich,R.A., Sisco,K.L. and Smith,H.O. (1980) An eleven-base-pair sequence determines the specificity of DNA uptake in Haemophilus transformation. Gene, 11, 311-318.
-
(1980)
Gene
, vol.11
, pp. 311-318
-
-
Danner, D.B.1
Deich, R.A.2
Sisco, K.L.3
Smith, H.O.4
-
4
-
-
0025773014
-
Species-specific uptake of DNA by gonococci is mediated by a 10-base-pair sequence
-
Elkins,C., Thomas,C.E., Seifert,H.S. and Sparling,P.F. (1991) Species-specific uptake of DNA by gonococci is mediated by a 10-base-pair sequence. J. Bacteriol., 173, 3911-3913.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 3911-3913
-
-
Elkins, C.1
Thomas, C.E.2
Seifert, H.S.3
Sparling, P.F.4
-
5
-
-
0034732226
-
Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491
-
Parkhill,J., Achtman,M., James,K.D., Bentley.S.D., Churcher,C., Klee,S.R., Morelli,G., Basham,D., Brown,D., Chillingworth,T. et al. (2000) Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491. Nature, 404, 502-506.
-
(2000)
Nature
, vol.404
, pp. 502-506
-
-
Parkhill, J.1
Achtman, M.2
James, K.D.3
Bentley, S.D.4
Churcher, C.5
Klee, S.R.6
Morelli, G.7
Basham, D.8
Brown, D.9
Chillingworth, T.10
-
6
-
-
0034629478
-
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58
-
Tettelin,H., Saunders,N.J., Heidelberg,J., Jeffries,A.C., Nelson,K.E., Eisen,J.A., Ketchum,K.A., Hood,D.W., Pede,J.F., Dodson,R.J. et al. (2000) Complete genome sequence of Neisseria meningitidis serogroup B strain MC58. Science, 287, 1809-1815.
-
(2000)
Science
, vol.287
, pp. 1809-1815
-
-
Tettelin, H.1
Saunders, N.J.2
Heidelberg, J.3
Jeffries, A.C.4
Nelson, K.E.5
Eisen, J.A.6
Ketchum, K.A.7
Hood, D.W.8
Pede, J.F.9
Dodson, R.J.10
-
7
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.F., Dougherty,B.A., Merrick.J.M. et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science, 269, 496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kerlavage, A.R.6
Bult, C.J.7
Tomb, J.F.8
Dougherty, B.A.9
Merrick, J.M.10
-
8
-
-
0029038068
-
Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genome
-
Smith,H.O., Tomb,J.F., Dougherty,B.A., Fleischmann,R.D. and Venter,J.C. (1995) Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genome. Science, 269, 538-540.
-
(1995)
Science
, vol.269
, pp. 538-540
-
-
Smith, H.O.1
Tomb, J.F.2
Dougherty, B.A.3
Fleischmann, R.D.4
Venter, J.C.5
-
9
-
-
0016223885
-
Specificity in deoxyribonucleic acid uptake by transformable Haemophilus influenzae
-
Scocca,J.J., Poland,R.L. and Zoon,K.C. (1974) Specificity in deoxyribonucleic acid uptake by transformable Haemophilus influenzae. J. Bacteriol., 118, 369-373.
-
(1974)
J. Bacteriol.
, vol.118
, pp. 369-373
-
-
Scocca, J.J.1
Poland, R.L.2
Zoon, K.C.3
-
11
-
-
0020356832
-
Sequence-specific DNA uptake in transformation of Neisseria gonorrhoeae
-
Graves,J.F., Biswas,G.D. and Sparling,P.F. (1982) Sequence-specific DNA uptake in transformation of Neisseria gonorrhoeae. J. Bacteriol., 152, 1071-1077.
-
(1982)
J. Bacteriol.
, vol.152
, pp. 1071-1077
-
-
Graves, J.F.1
Biswas, G.D.2
Sparling, P.F.3
-
12
-
-
0025042435
-
Identification of Haemophilus aphrophilus and Actinobacillus actinomycetemcomitans by DNA-DNA hybridization and genetic transformation
-
Tønjum,T., Bukholm,G. and Bøvre,K. (1990) Identification of Haemophilus aphrophilus and Actinobacillus actinomycetemcomitans by DNA-DNA hybridization and genetic transformation. J. Clin. Microbiol., 28, 1994-1998.
-
(1990)
J. Clin. Microbiol.
, vol.28
, pp. 1994-1998
-
-
Tønjum, T.1
Bukholm, G.2
Bøvre, K.3
-
13
-
-
0036282335
-
Natural transformation and DNA uptake signal sequences in Actinobacillus actinomycetemcomitans
-
Wang,Y., Goodman,S.D., Redfield,R.J. and Chen,C. (2002) Natural transformation and DNA uptake signal sequences in Actinobacillus actinomycetemcomitans. J. Bacteriol., 184, 3442-3449.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3442-3449
-
-
Wang, Y.1
Goodman, S.D.2
Redfield, R.J.3
Chen, C.4
-
14
-
-
0032789080
-
Transposable elements as a molecular evolutionary force
-
Fedoroff,N.V. (1999) Transposable elements as a molecular evolutionary force. Ann. NY Acad. Sci., 870, 251-264.
-
(1999)
Ann. NY Acad. Sci.
, vol.870
, pp. 251-264
-
-
Fedoroff, N.V.1
-
15
-
-
0023667782
-
Stabilization of translationally active mRNA by prokaryotic REP sequences
-
Newbury,S.F., Smith,N.H., Robinson,E.C., Hiles,I.D. and Higgins,C.F. (1987) Stabilization of translationally active mRNA by prokaryotic REP sequences. Cell, 48, 297-310.
-
(1987)
Cell
, vol.48
, pp. 297-310
-
-
Newbury, S.F.1
Smith, N.H.2
Robinson, E.C.3
Hiles, I.D.4
Higgins, C.F.5
-
16
-
-
0034875104
-
Comparative whole-genome analyses reveal over 100 putative phase-variable genes in the pathogenic Neisseria spp
-
Snyder,L.A., Butcher,S.A. and Saunders,N.J. (2001) Comparative whole-genome analyses reveal over 100 putative phase-variable genes in the pathogenic Neisseria spp. Microbiology, 147, 2321-2332.
-
(2001)
Microbiology
, vol.147
, pp. 2321-2332
-
-
Snyder, L.A.1
Butcher, S.A.2
Saunders, N.J.3
-
17
-
-
0033865030
-
Estimating the relative contributions of mutation and recombination to clonal diversification: A comparison between Neisseria meningitidis and Streptococcus pneumoniae
-
Feil,E.J., Enright,M.C. and Spratt,B.G. (2000) Estimating the relative contributions of mutation and recombination to clonal diversification: a comparison between Neisseria meningitidis and Streptococcus pneumoniae. Res. Microbiol., 151, 465-469.
-
(2000)
Res. Microbiol.
, vol.151
, pp. 465-469
-
-
Feil, E.J.1
Enright, M.C.2
Spratt, B.G.3
-
18
-
-
0036567071
-
Over-representation of repeats in stress response genes: A strategy to increase versatility under stressful conditions?
-
Rocha,E.P., Matic,I. and Taddei,F. (2002) Over-representation of repeats in stress response genes: a strategy to increase versatility under stressful conditions? Nucleic Acids Res., 30, 1886-1894.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1886-1894
-
-
Rocha, E.P.1
Matic, I.2
Taddei, F.3
-
19
-
-
0033382706
-
DNA uptake signal sequences in naturally transformable bacteria
-
Smith,H.O., Gwinn,M.L. and Salzberg,S.L. (1999) DNA uptake signal sequences in naturally transformable bacteria. Res. Microbiol., 150, 603-616.
-
(1999)
Res. Microbiol.
, vol.150
, pp. 603-616
-
-
Smith, H.O.1
Gwinn, M.L.2
Salzberg, S.L.3
-
20
-
-
0030984550
-
The evolution of bacterial transformation: Sex with poor relations
-
Redfield,R.J., Schrag,M.R. and Dean,A.M. (1997) The evolution of bacterial transformation: sex with poor relations. Genetics, 146, 27-38.
-
(1997)
Genetics
, vol.146
, pp. 27-38
-
-
Redfield, R.J.1
Schrag, M.R.2
Dean, A.M.3
-
21
-
-
0000858720
-
Identification and arrangement of the DNA sequence recognized in specific transformation of Neisseria gonorrhoeae
-
Goodman,S.D. and Scocca,J.J. (1988) Identification and arrangement of the DNA sequence recognized in specific transformation of Neisseria gonorrhoeae. Proc. Natl Acad. Sci. USA, 85, 6982-6986.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 6982-6986
-
-
Goodman, S.D.1
Scocca, J.J.2
-
22
-
-
0033956060
-
The COG database: A tool for genome-scale analysis of protein functions and evolution
-
Tatusov,R.L., Galperin,M.Y., Natale,D.A. and Koonin,E.V. (2000) The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res., 28, 33-36.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
23
-
-
0035424711
-
On the total number of genes and their length distribution in complete microbial genomes
-
Skovgaard,M., Jensen,L.J., Brunak,S., Ussery,D. and Krogh,A. (2001) On the total number of genes and their length distribution in complete microbial genomes. Trends Genet., 17, 425-428.
-
(2001)
Trends Genet.
, vol.17
, pp. 425-428
-
-
Skovgaard, M.1
Jensen, L.J.2
Brunak, S.3
Ussery, D.4
Krogh, A.5
-
24
-
-
0034125366
-
Probabilistic and statistical properties of words: An overview
-
Reinert,G., Schbath,S. and Waterman,M.S. (2000) Probabilistic and statistical properties of words: an overview. J. Comput. Biol., 7, 1-46.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 1-46
-
-
Reinert, G.1
Schbath, S.2
Waterman, M.S.3
-
25
-
-
0026521298
-
Plasmid transformation of naturally competent Acinetobacter calcoaceticus in non-sterile soil extract and groundwater
-
Lorenz,M.G., Reipschlager,K. and Wackernagel,W. (1992) Plasmid transformation of naturally competent Acinetobacter calcoaceticus in non-sterile soil extract and groundwater. Arch. Microbiol., 157, 355-360.
-
(1992)
Arch. Microbiol.
, vol.157
, pp. 355-360
-
-
Lorenz, M.G.1
Reipschlager, K.2
Wackernagel, W.3
-
26
-
-
0032697140
-
DNA uptake in bacteria
-
Dubnau,D. (1999) DNA uptake in bacteria. Annu. Rev. Microbiol., 53, 217-244.
-
(1999)
Annu. Rev. Microbiol.
, vol.53
, pp. 217-244
-
-
Dubnau, D.1
-
27
-
-
0028136885
-
Bacterial gene transfer by natural genetic transformation in the environment
-
Lorenz,M.G. and Wackernagel,W. (1994) Bacterial gene transfer by natural genetic transformation in the environment. Microbiol. Rev., 58, 563-602.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 563-602
-
-
Lorenz, M.G.1
Wackernagel, W.2
-
28
-
-
0013974742
-
Genetic transformation of Neisseria gonorrhoeae to streptomycin resistance
-
Sparling,P.F. (1966) Genetic transformation of Neisseria gonorrhoeae to streptomycin resistance. J. Bacteriol., 92, 1364-1371.
-
(1966)
J. Bacteriol.
, vol.92
, pp. 1364-1371
-
-
Sparling, P.F.1
-
29
-
-
0030913947
-
The pilus colonization factor of pathogenic neisserial species: Organelle biogenesis and structure/function relationships - A review
-
Tonjum,T. and Koomey,M. (1997) The pilus colonization factor of pathogenic neisserial species: organelle biogenesis and structure/function relationships - a review. Gene, 192, 155-163.
-
(1997)
Gene
, vol.192
, pp. 155-163
-
-
Tonjum, T.1
Koomey, M.2
-
30
-
-
0026580013
-
The gene encoding cAMP receptor protein is required for competence development in Haemophilus influenzae Rd
-
Chandler,M.S. (1992) The gene encoding cAMP receptor protein is required for competence development in Haemophilus influenzae Rd. Proc. Natl Acad. Sci. USA, 89, 1626-1630.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 1626-1630
-
-
Chandler, M.S.1
-
31
-
-
0035006343
-
Competence development by Haemophilus influenzae is regulated by the availability of nucleic acid precursors
-
MacFadyen,L.P., Chen,D., Vo,H.C., Liao,D., Sinotte,R. and Redfield,R.J. (2001) Competence development by Haemophilus influenzae is regulated by the availability of nucleic acid precursors. Mol. Microbiol., 40, 700-707.
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 700-707
-
-
MacFadyen, L.P.1
Chen, D.2
Vo, H.C.3
Liao, D.4
Sinotte, R.5
Redfield, R.J.6
-
32
-
-
0028845364
-
An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae
-
Havarstein,L.S., Coomaraswamy,G. and Morrison,D.A. (1995) An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae. Proc. Natl Acad. Sci. USA, 92, 11140-11144.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 11140-11144
-
-
Havarstein, L.S.1
Coomaraswamy, G.2
Morrison, D.A.3
-
33
-
-
0034903021
-
Natural transformation competence in Helicobacter pylori is mediated by the basic components of a type IV secretion system
-
Hofreuter,D., Odenbreit,S. and Haas,R. (2001) Natural transformation competence in Helicobacter pylori is mediated by the basic components of a type IV secretion system. Mol. Microbiol., 41, 379-391.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 379-391
-
-
Hofreuter, D.1
Odenbreit, S.2
Haas, R.3
-
34
-
-
0027465204
-
Physiological characterization of natural transformation in Acinetobacter calcoaceticus
-
Palmen,R., Vosman,B., Buijsman,P., Breek,C.K. and Hellingwerf,K.J. (1993) Physiological characterization of natural transformation in Acinetobacter calcoaceticus. J. Gen. Microbiol., 139, 295-305.
-
(1993)
J. Gen. Microbiol.
, vol.139
, pp. 295-305
-
-
Palmen, R.1
Vosman, B.2
Buijsman, P.3
Breek, C.K.4
Hellingwerf, K.J.5
-
35
-
-
0033396515
-
Absence in Helicobacter pylori of an uptake sequence for enhancing uptake of homospecific DNA during transformation
-
Saunders,N.J., Peden,J.F. and Moxon,E.R. (1999) Absence in Helicobacter pylori of an uptake sequence for enhancing uptake of homospecific DNA during transformation. Microbiology, 145, 3523-3528.
-
(1999)
Microbiology
, vol.145
, pp. 3523-3528
-
-
Saunders, N.J.1
Peden, J.F.2
Moxon, E.R.3
-
36
-
-
0035430787
-
Do bacteria have Sex?
-
Redfield,R.J. (2001) Do bacteria have Sex? Nature Rev. Genet., 2, 634-639.
-
(2001)
Nature Rev. Genet.
, vol.2
, pp. 634-639
-
-
Redfield, R.J.1
-
37
-
-
0024266651
-
A family of small repeated elements with some transposon-like properties in the genome of Neisseria gonorrhoeae
-
Correia,F.F., Inouye,S. and Inouye,M. (1988) A family of small repeated elements with some transposon-like properties in the genome of Neisseria gonorrhoeae. J. Biol. Chem., 263, 12194-12198.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 12194-12198
-
-
Correia, F.F.1
Inouye, S.2
Inouye, M.3
-
38
-
-
0028566106
-
Chi and the RecBC D enzyme of Escherichia coli
-
Myers,R.S. and Stahl,F.W. (1994) Chi and the RecBC D enzyme of Escherichia coli. Annu. Rev. Genet., 28, 49-70.
-
(1994)
Annu. Rev. Genet.
, vol.28
, pp. 49-70
-
-
Myers, R.S.1
Stahl, F.W.2
-
39
-
-
0027447689
-
Evolution of natural transformation: Testing the DNA repair hypothesis in Bacillus subtilis and Haemophilus influenzae
-
Redfield,R.J. (1993) Evolution of natural transformation: testing the DNA repair hypothesis in Bacillus subtilis and Haemophilus influenzae. Genetics, 133, 755-761.
-
(1993)
Genetics
, vol.133
, pp. 755-761
-
-
Redfield, R.J.1
-
40
-
-
0032173634
-
Global dinucleotide signatures and analysis of genomic heterogeneity
-
Karlin,S. (1998) Global dinucleotide signatures and analysis of genomic heterogeneity. Curr. Opin. Microbiol., 1, 598-610.
-
(1998)
Curr. Opin. Microbiol.
, vol.1
, pp. 598-610
-
-
Karlin, S.1
-
41
-
-
0034703744
-
Evolutionary implications of the frequent horizontal transfer of mismatch repair genes
-
Denamur,E., Lecointre,G., Darlu,P., Tenaillon,O., Acquaviva,C., Sayada,C., Sunjevaric,I., Rothstein,R., Elion,J., Taddei,F. et al. (2000) Evolutionary implications of the frequent horizontal transfer of mismatch repair genes. Cell, 103, 711-721.
-
(2000)
Cell
, vol.103
, pp. 711-721
-
-
Denamur, E.1
Lecointre, G.2
Darlu, P.3
Tenaillon, O.4
Acquaviva, C.5
Sayada, C.6
Sunjevaric, I.7
Rothstein, R.8
Elion, J.9
Taddei, F.10
-
42
-
-
0037849904
-
Stress-induced mutagenesis in bacteria
-
Bjedov,I., Tenaillon,O., Gerard,B., Souza,V., Denamur,E., Radman,M., Taddei,F. and Matic,I. (2003) Stress-induced mutagenesis in bacteria. Science, 300, 1404-1409.
-
(2003)
Science
, vol.300
, pp. 1404-1409
-
-
Bjedov, I.1
Tenaillon, O.2
Gerard, B.3
Souza, V.4
Denamur, E.5
Radman, M.6
Taddei, F.7
Matic, I.8
-
43
-
-
3042795925
-
-
http://www.genome.ou.edu. 2003.
-
(2003)
-
-
-
44
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner,F.R., Plunkett,G., III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F. et al. (1997) The complete genome sequence of Escherichia coli K-12. Science, 277, 1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
-
45
-
-
0035853112
-
Complete genomic sequence of Pasteurella multocida, Pm70
-
May,B.J., Zhang,Q., Li,L.L., Paustian,M.L., Whittam,T.S. and Kapur,V. (2001) Complete genomic sequence of Pasteurella multocida, Pm70. Proc. Natl Acad. Sci. USA, 98, 3460-3465.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 3460-3465
-
-
May, B.J.1
Zhang, Q.2
Li, L.L.3
Paustian, M.L.4
Whittam, T.S.5
Kapur, V.6
|