Frequent oligonucleotides and peptides of the Haemophilus influenzae genome

Nucleic Acids Research

Volumn 24, Issue 21, 1996, Pages 4263-4272

  Karlin, Samuel ^a   Mrázek, Jan ^a   Campbell, Allan M ^a  

^a STANFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; OLIGONUCLEOTIDE; OLIGOPEPTIDE; TRANSCRIPTION FACTOR;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; BINDING SITE; ESCHERICHIA COLI; GENE STRUCTURE; GENOME; HAEMOPHILUS INFLUENZAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; STRUCTURE ACTIVITY RELATION;

AMINO ACID SEQUENCE; BASE SEQUENCE; DNA, BACTERIAL; GENOME, BACTERIAL; HAEMOPHILUS INFLUENZAE; MICROSATELLITE REPEATS; MODELS, GENETIC; MODELS, STATISTICAL; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDES; PEPTIDES;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; HAEMOPHILUS INFLUENZAE; PROKARYOTA;

EID: 10344260141     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.21.4263     Document Type: Article

References (35)

1. Fleischmann, R. D., Adams, M. D., White, O., Clayton, R. A., Kirkness, E. F., Kerlavage, A. R., Bult, C. J., Tomb, J.-F., Dougherty. B. A., Merrick, J. M., et al. (1995) Science, 269, 496-512.
2. Brosius, J. (1996) Science, 271, 1302.
3. Robison, K., Gilbert, W. and Church, G. M. (1996) Science, 271, 1302-1303.
4. Tatusov, R. L., Mushegian, A. R., Bork, P., Brown, N. P., Hayes, W. S., Borodovsky, M., Rudd, K. E. and Koonin. E. V. (1996) Curr. Biol., 6, 279-291.
5. Burge, C., Campbell, A. M. and Karlin, S. (1992) Proc. Nutl. Acad. Sci. USA. 89, 1358-1362.
6. Smith, H. O., Tomb, J.-F., Dougherty, B. A., Fleischmann, R. D. and Venter J. C. (1995) Science. 269, 538-540.
7. Krawiec, S. and Riley,M. (1990) Microbiol. Rev., 54, 502-539.
8. Blaisdell, B. E., Rudd, K. E., Matin, A. and Karlin, S. (1993) J. Mol. Biol., 229, 833-848.
9. Rawlings, N. D. and Barren, A. J. (1994) Methods Enzymol., 244, 19-61.
10. Walker, J. E., Saraste, M., Runswick, M. J. and Gay. N. J. (1982) EMBOJ., 1, 945-951.
11. Lorenz, M. G. and Wackernagel, W. (1994) Microhiol. Kev., 58, 563-602.
12. Solomon, J. M. and Grossman, A. D. (1996) Trends Genet., 12, 148-155.
13. Karlin, S. and Cardon, L. R. (1994) Annu. Rev. Microbiol., 48, 619-654.
14. Robinson, N. J., Robinson, P. J., Gupta, A., Bleasby, A. J., Whitton, B. A. and Morby, A. P. (1995) Nucleic Acids Res., 23, 729-735.
15. Karlin, S. and Taylor, H. M. (1975) A First Course in Stochastic Processes. Chapter 5. Academic Press, San Diego, CA, USA.
16. Kleffe. J. and Borodovsky, M. (1992) Comput. Appl. Biosci., 8,433-441.
17. Schbath, S., Prum, B. and de Turckheim, E. (1995) J. Comput. Biol., 2, 417-437.
18. Karlin, S. and Brendel, V. (1996) In Arrow, K. J., Cottle. R. W., Eaves, B. C. and Olkin, I. (eds), Education in a Research University. Stanford University Press, Stanford, CA, USA pp. 407-427.
19. Karlin, S. and Leung, M.-Y. (1991) Ann. Appl. Prob., l, 513-538.
20. Dembo, A. and Karlin, S. (1992) Ann. Appl. Prob., 2, 329-357.
21. Kahn, M. E. and Smith, H. O. (1984) J. Membrane Biol., 81, 89-103.
22. Mrázek, J. and Karlin, S. (1996) Trends Biochem. Sci., 21, 201-202.
23. Higgins, C. F., Gallagher, M. P., Mimmack, M. L. and Pearce. S. R. (1988) BioEssavs, 8, 111-116.
24. Nagel, G. M. and Doolittle, R. F. (1995) J. Mol Evol. 40. 487-498.
25. Mongold, J. A. (1992) Genetics. 132, 893-898.
26. Bernstein, H., Byerly, H. C., Hopf. F A. and Michod, R. E. (1985) Int. Rev. Cytol., 96, 1-24.
27. Grigorieva, G. and Shestakov, S. (1982) FEMS Microhiol. Lett., 13. 367-370.
28. Moxon, E. R., Rainey, P. B. Nowak, M. A. and Lenski. R. E. (1994) Curr. Biol., 4, 24-33.
29. Rainey, P. B., Moxon, E R. and Thompson, I.P. (1993) Adv. Microbiol. Ecol, 13, 263-300.
30. High, N. J., Deadman, M. E. and Moxon. E. R. (1993) Mol. Microbiol., 9, 1275-1282.
31. Willems, R., Paul, A., van der Heide, H. G. J., Ter Avest, A. R. and Mooi. F. R. (1990) EMBO J., 9, 2803-2810.
32. Olyhoek, A. J. M., Sarkari, J., Bopp, M., Morelli, G. and Achtman, M. (1991) Microb. Pathog., 11, 249-257.
33. Stern, A., Brown, M., Nickel, P. and Meyer, T. F. (1986) Cell, 47, 61-67.
34. Karlin, S., Bucher, P., Brendel, V. and Altschul, S. (1991) Annu. Rev. Biophys. Biophys. Chem.,20, 175-203.
35. Borodovsky, M. and Mclninch, J. (1993) Comput. Chem., 17, 123-133.