Detection and identification of stable oligomeric protein complexes in Escherichi coli inner membranes: A proteomics approach

Journal of Biological Chemistry

Volumn 280, Issue 31, 2005, Pages 28742-28748

  Spelbrink, Robin E J ^a   Kolkman, Annemieke ^b   Slijper, Monique ^b   Killian, J Antoinette ^a   De Kruijff, Ben ^a  

^a UTRECHT UNIVERSITY   (Netherlands)

^b UTRECHT UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOLS; BIOLOGICAL MEMBRANES; CHROMATOGRAPHIC ANALYSIS; COMPLEXATION; ESCHERICHIA COLI; OLIGOMERS; POTASSIUM;

MEMBRANE PROTEINS; POTASSIUM CHANNELS; PROTEIN COMPLEXES; PROTEOMICS;

PROTEINS;

ALCOHOL DERIVATIVE; BACTERIAL PROTEIN; MEMBRANE PROTEIN; OLIGOMER; POTASSIUM CHANNEL;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL MEMBRANE; COMPLEX FORMATION; DISSOCIATION; ELECTROPHORESIS; ESCHERICHIA COLI; LIQUID CHROMATOGRAPHY; NONHUMAN; OLIGOMERIZATION; POTASSIUM CHANNEL KCSA; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STABILITY; PROTEOMICS; TANDEM MASS SPECTROMETRY; TECHNOLOGY;

CELL MEMBRANE; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; MACROMOLECULAR SUBSTANCES; MEMBRANE PROTEINS; POTASSIUM CHANNELS; PROTEOME;

ESCHERICHIA COLI;

EID: 23344450195     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M501617200     Document Type: Article

References (38)

1. Wallin, E., and von Heijne, G. (1998) Protein Sci. 7, 1029-1038
2. Heginbotham, L., Odessey, E., and Miller, C. (1997) Biochemistry 36, 10335-10342
3. Driessen, A. J., Fekkes, P., and van der Wolk, J. P. (1998) Curr. Opin. Microbiol. 1, 216-222
4. Butland, G., Peregrin-Alvarez, J. M., Li, J., Yang, W., Yang, X., Canadien, V., Starostine, A., Richards, D., Beattie, B., Krogan, N., Davey, M., Parkinson, J., Greenblatt, J., and Emili, A. (2005) Nature 433, 531-537
5. Gavin, A., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J., Michon, A., Cruciat, C., Remor, M., Hofert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rud, i. T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M. A., Copley, R. R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G., and Superti-Furga, G. (2002) Nature 415, 141-147
6. Doyle, D. A., Morais, C. J., Pfuetzner, R. A., Kuo, A., Gulbis, J. M., Cohen, S. L., Chait, B. T., and MacKinnon, R. (1998) Science 280, 69-77
7. Lu, Z., Klein, A. M., and Ramu, Y. (2001) Nature 413, 809-813
8. Miller, C. (2000) Genome Biol. 2000, reviews0004
9. Koprowski, P., and Kubalski, A. (2001) BioEssays 12, 1148-1158
10. van den Brink-van der Laan, E., Chupin, V., Killian, J. A., and de Kruijff, B. (2004) Biochemistry 43, 5937-5942
11. van den Brink-van der Laan, E., Chupin, V., Killian, J. A., and de Kruijff, B, (2004) Biochemistry 43, 4240-4250
12. Schagger, H., and von Jagow, G. (1991) Anal. Biochem. 199, 223-231
13. van Dalen, A., van der Laan, M., Driessen, A. J., Killian, J. A., and de Kruijff, B. (2002) FEBS Lett. 511, 51-58
14. van Dalen, A., Hegger, S., Killian, J., A., and de Kruijff, B. (2002) FEBS Lett. 525, 33-38
15. De Vrije, T., Tommassen, J., and de Kruijff, B. (1987) Biochim. Biophys. Acta 900, 63-72
16. Wilm, M., Shevchenko, A., Houthaeve, T., Breit, S., Schweigerer, L., Fotsis, T., and Mann, M. (1996) Nature 379, 466-469
17. Meiring, H. D., van der Heeft, E., ten Hove, G. J., and de Jong, A. P. J. M. (2002) J. Sep. Sci. 25, 557-568
18. Eng, J. K., Mccormack, A. L., and Yates, J. R., III (1994) J. Am. Soc. Mass Spectrom. 5, 976-989
19. Tabb, D. L., McDonald, W. H., and Yates, J. R., III (2002) J. Proteome Res. 1, 21-26
20. Postma, P. W., Lengeler, J. W., and Jacobson, G. R. (1993) Microbiol. Rev. 57, 543-594
21. Robillard, G. T., and Broos, J. (1999) Biochim. Biophys. Acta 1422, 73-104
22. Charpentier, X., Chalut, C., Remy, M.-H., and Masson, J.-M. (2002) J. Bacteriol. 184, 3749-3752
23. Vollmer, W., von Rechenberg, M. and Holtje, J. V. (1999) J. Biol. Chem. 274, 6726-6734
24. Endermann, R., and Henning, U. (1979) FEBS Lett. 97, 339-342
25. Luckey, M., Ling, R., Dose, A., and Malloy, B. (1991) J. Biol. Chem. 266, 1866-1871
26. Phale, P. S., Philippsen, A., Kiefhaber, T., Koebnik, R., Phale, V. P., Schirmer, T., and Rosenbusch, J. P. (1998) Biochemistry 37, 15663-15670
27. Driessen, A. J. (1993) Biochemistry 32, 13190-13197
28. Or, E., Navon, A., and Rapoport, T. (2002) EMBO J. 21, 4470-45479
29. Tziatios, C., Schubert, D., Lotz, M., Gundogan, D., Betz, H., Schagger, H., Haase, W., Duong, F., and Collinson, I. (2004) J. Mol. Biol. 340, 513-524
30. Woodbury, R. L., Topping, T. B., Diamond, D. L., Suciu, D., Kumamoto, C. A., Hardy, S. J., and Randall, L. L. (2000) J. Biol. Chem. 275, 24191-24198
31. Buck, M. (1998) Q. Rev. Biophys. 3, 297-355
32. Aboulwafa, M., Hvorup, R., and Saier, M. H. J. (2004) Arch. Microbiol. 181, 26-34
33. Aboulwafa, M., and Saier, M. H. J. (2002) Res. Microbiol. 153, 667-677
34. van der Does, C., Swaving, J., van Klompenburg, W., and Driessen, A. J. (2002) J. Biol. Chem. 275, 2472-2478
35. Rietveld, A. G., Koorengevel, M. C., and De Kruijff, B. (1995) EMBO J. 14, 5506-5513
36. Cantor, R. S. (1997) J. Phys. Chem. B 101, 1723-1725
37. van den Brink-van der Laan, E., Killian, J. A., and de Kruijff, B. (2004) Biochim. Biophys. Acta 1666, 275-288
38. Sonnhammer, E. L. L., von Heijne, G., and Krogh, A. (1998) in Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (Glasgow, J., Littlejohn, T., Major, F., Lathrop, R., Sankoff, D., and Sensen, C., eds) pp. 175-182, American Association for Artificial Intelligence Press, Menlo Park, CA