메뉴 건너뛰기




Volumn 334, Issue 4, 2005, Pages 1032-1041

Targeted correction of a chromosomal point mutation by modified single-stranded oligonucleotides in a GFP recovery system

Author keywords

Chimeraplasty; EGFP reporter system; Mutant enhanced green fluorescence protein gene (mEGFP); RNA DNA oligonucleotide; Single stranded oligonucleotide; Strand bias; Targeted gene correction; Transfection

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR; GREEN FLUORESCENT PROTEIN; OLIGONUCLEOTIDE;

EID: 23044473394     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2005.06.193     Document Type: Article
Times cited : (19)

References (38)
  • 1
    • 0029892249 scopus 로고    scopus 로고
    • Targeted gene correction of episomal DNA in mammalian cells mediated by a chimeric RNA•DNA oligonucleotide
    • K. Yoon, A. Cole-Strauss, and E.B. Kmiec Targeted gene correction of episomal DNA in mammalian cells mediated by a chimeric RNA•DNA oligonucleotide Proc. Natl. Acad. Sci. USA 93 1996 2071 2076
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 2071-2076
    • Yoon, K.1    Cole-Strauss, A.2    Kmiec, E.B.3
  • 3
    • 0033104162 scopus 로고    scopus 로고
    • Targeted gene repair directed by the chimeric RNA/DNA oligonucleotide in a mammalian cell-free extract
    • A. Cole-Strauss, H. Gamper, W.K. Holloman, M. Munoz, N. Cheng, and E.B. Kmiec Targeted gene repair directed by the chimeric RNA/DNA oligonucleotide in a mammalian cell-free extract Nucleic Acids Res. 27 1999 1323 1330
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1323-1330
    • Cole-Strauss, A.1    Gamper, H.2    Holloman, W.K.3    Munoz, M.4    Cheng, N.5    Kmiec, E.B.6
  • 4
    • 0034995488 scopus 로고    scopus 로고
    • In vitro and in vivo nucleotide exchange directed by chimeric RNA/DNA oligonucleotides in Saccharomyces cerevisiae
    • M.C. Rice, M. Bruner, K. Czymmek, and E.B. Kmiec In vitro and in vivo nucleotide exchange directed by chimeric RNA/DNA oligonucleotides in Saccharomyces cerevisiae Mol. Microbiol. 40 2001 857 868
    • (2001) Mol. Microbiol. , vol.40 , pp. 857-868
    • Rice, M.C.1    Bruner, M.2    Czymmek, K.3    Kmiec, E.B.4
  • 5
    • 0033587679 scopus 로고    scopus 로고
    • A tool for functional plant genomics: Chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations
    • P.R. Beetham, P.B. Kipp, X.L. Sawycky, C.J. Arntzen, and G.D. May A tool for functional plant genomics: chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations Proc. Natl. Acad. Sci. USA 96 1999 8774 8778
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 8774-8778
    • Beetham, P.R.1    Kipp, P.B.2    Sawycky, X.L.3    Arntzen, C.J.4    May, G.D.5
  • 8
    • 0030913556 scopus 로고    scopus 로고
    • Targeted nucleotide exchange in the alkaline phosphatase gene of HuH-7 cells mediated by a chimeric RNA/DNA oligonucleotide
    • B.T. Kren, A. Cole-Strauss, E.B. Kmiec, and C.J. Steer Targeted nucleotide exchange in the alkaline phosphatase gene of HuH-7 cells mediated by a chimeric RNA/DNA oligonucleotide Hepatology 25 1997 1462 1468
    • (1997) Hepatology , vol.25 , pp. 1462-1468
    • Kren, B.T.1    Cole-Strauss, A.2    Kmiec, E.B.3    Steer, C.J.4
  • 9
    • 0031734471 scopus 로고    scopus 로고
    • Stable and inheritable changes in genotype and phenotype of albino melanocytes induced by an RNA-DNA oligonucleotide
    • V. Alexeev, and K. Yoon Stable and inheritable changes in genotype and phenotype of albino melanocytes induced by an RNA-DNA oligonucleotide Nat. Biotechnol. 16 1998 1343 1346
    • (1998) Nat. Biotechnol. , vol.16 , pp. 1343-1346
    • Alexeev, V.1    Yoon, K.2
  • 10
    • 85047696977 scopus 로고    scopus 로고
    • Targeted beta-globin gene conversion in human hematopoietic CD34(+) and Lin(-)CD38(-) cells
    • H. Liu, S. Agarwal, E. Kmiec, and B.R. Davis Targeted beta-globin gene conversion in human hematopoietic CD34(+) and Lin(-)CD38(-) cells Gene Ther. 9 2002 118 126
    • (2002) Gene Ther. , vol.9 , pp. 118-126
    • Liu, H.1    Agarwal, S.2    Kmiec, E.3    Davis, B.R.4
  • 11
    • 0033621041 scopus 로고    scopus 로고
    • Correction of the UDP-glucuronosyltransferase gene defect in the gunn rat model of crigler-najjar syndrome type I with a chimeric oligonucleotide
    • B.T. Kren, B. Parashar, P. Bandyopadhyay, N.R. Chowdhury, J.R. Chowdhury, and C.J. Steer Correction of the UDP-glucuronosyltransferase gene defect in the gunn rat model of crigler-najjar syndrome type I with a chimeric oligonucleotide Proc. Natl. Acad. Sci. USA 96 1999 10349 10354
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 10349-10354
    • Kren, B.T.1    Parashar, B.2    Bandyopadhyay, P.3    Chowdhury, N.R.4    Chowdhury, J.R.5    Steer, C.J.6
  • 12
    • 0034624974 scopus 로고    scopus 로고
    • Rescue of dystrophin expression in mdx mouse muscle by RNA/DNA oligonucleotides
    • T.A. Rando, M.H. Disatnik, and L.Z. Zhou Rescue of dystrophin expression in mdx mouse muscle by RNA/DNA oligonucleotides Proc. Natl. Acad. Sci. USA 97 2000 5363 5368
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 5363-5368
    • Rando, T.A.1    Disatnik, M.H.2    Zhou, L.Z.3
  • 13
    • 0034966380 scopus 로고    scopus 로고
    • Targeted correction of the point mutations of beta-thalassemia and targeted mutagenesis of the nucleotide associated with HPFH by RNA/DNA oligonucleotides: Potential for beta-thalassemia gene therapy
    • Z.H. Li, D.P. Liu, W.X. Yin, Z.C. Guo, and C.C. Liang Targeted correction of the point mutations of beta-thalassemia and targeted mutagenesis of the nucleotide associated with HPFH by RNA/DNA oligonucleotides: potential for beta-thalassemia gene therapy Blood Cells Mol. Dis. 27 2001 530 538
    • (2001) Blood Cells Mol. Dis. , vol.27 , pp. 530-538
    • Li, Z.H.1    Liu, D.P.2    Yin, W.X.3    Guo, Z.C.4    Liang, C.C.5
  • 14
    • 0031047639 scopus 로고    scopus 로고
    • Recombinant DNA technique and sickle cell anemia research
    • K.R. Thomas, and M.R. Capecchi Recombinant DNA technique and sickle cell anemia research Science 275 1997 1404 1405
    • (1997) Science , vol.275 , pp. 1404-1405
    • Thomas, K.R.1    Capecchi, M.R.2
  • 18
    • 2342515546 scopus 로고    scopus 로고
    • Failure to generate atheroprotective apolipoprotein AI phenotypes using synthetic RNA/DNA oligonucleotides (chimeraplasts)
    • A. Manzano, Z. Mohri, G. Sperber, M. Ogris, I. Graham, G. Dickson, and J.S. Owen Failure to generate atheroprotective apolipoprotein AI phenotypes using synthetic RNA/DNA oligonucleotides (chimeraplasts) J. Gene Med. 5 2003 795 802
    • (2003) J. Gene Med. , vol.5 , pp. 795-802
    • Manzano, A.1    Mohri, Z.2    Sperber, G.3    Ogris, M.4    Graham, I.5    Dickson, G.6    Owen, J.S.7
  • 19
    • 0036512266 scopus 로고    scopus 로고
    • Functional correction of episomal mutations with short DNA fragments and RNA-DNA oligonucleotides
    • P.H. Thorpe, B.J. Stevenson, and D.J. Porteous Functional correction of episomal mutations with short DNA fragments and RNA-DNA oligonucleotides J. Gene Med. 4 2002 195 204
    • (2002) J. Gene Med. , vol.4 , pp. 195-204
    • Thorpe, P.H.1    Stevenson, B.J.2    Porteous, D.J.3
  • 22
    • 0034327613 scopus 로고    scopus 로고
    • The DNA strand of chimeric RNA/DNA oligonucleotides can direct gene repair/conversion activity in mammalian and plant cell-free extracts
    • H.B. Gamper, H. Parekh, M.C. Rice, M. Bruner, H. Youkey, and E.B. Kmiec The DNA strand of chimeric RNA/DNA oligonucleotides can direct gene repair/conversion activity in mammalian and plant cell-free extracts Nucleic Acids Res. 28 2000 4332 4339
    • (2000) Nucleic Acids Res. , vol.28 , pp. 4332-4339
    • Gamper, H.B.1    Parekh, H.2    Rice, M.C.3    Bruner, M.4    Youkey, H.5    Kmiec, E.B.6
  • 23
    • 0035077792 scopus 로고    scopus 로고
    • Targeted gene correction by small single-stranded oligonucleotides in mammalian cells
    • O. Igoucheva, V. Alexeev, and K. Yoon Targeted gene correction by small single-stranded oligonucleotides in mammalian cells Gene Ther. 8 2001 391 399
    • (2001) Gene Ther. , vol.8 , pp. 391-399
    • Igoucheva, O.1    Alexeev, V.2    Yoon, K.3
  • 24
    • 0035886376 scopus 로고    scopus 로고
    • In vivo gene repair of point and frameshift mutations directed by chimeric RNA/DNA oligonucleotides and modified single-stranded oligonucleotides
    • L. Liu, M.C. Rice, and E.B. Kmiec In vivo gene repair of point and frameshift mutations directed by chimeric RNA/DNA oligonucleotides and modified single-stranded oligonucleotides Nucleic Acids Res. 29 2001 4238 4250
    • (2001) Nucleic Acids Res. , vol.29 , pp. 4238-4250
    • Liu, L.1    Rice, M.C.2    Kmiec, E.B.3
  • 25
    • 0141927821 scopus 로고    scopus 로고
    • Correction/mutation of acid alpha-d-glucosidase gene by modified single-stranded oligonucleotides: In vitro and in vivo studies
    • I.L. Lu, C.Y. Lin, S.B. Lin, S.T. Chen, L.Y. Yeh, F.Y. Yang, and L.C. Au Correction/mutation of acid alpha-d-glucosidase gene by modified single-stranded oligonucleotides: in vitro and in vivo studies Gene Ther. 10 2003 1910 1916
    • (2003) Gene Ther. , vol.10 , pp. 1910-1916
    • Lu, I.L.1    Lin, C.Y.2    Lin, S.B.3    Chen, S.T.4    Yeh, L.Y.5    Yang, F.Y.6    Au, L.C.7
  • 26
    • 0036640365 scopus 로고    scopus 로고
    • Rad51p and Rad54p, but not Rad52p, elevate gene repair in Saccharomyces cerevisiae directed by modified single-stranded oligonucleotide vectors
    • L. Liu, S. Cheng, A.J. van Brabant, and E.B. Kmiec Rad51p and Rad54p, but not Rad52p, elevate gene repair in Saccharomyces cerevisiae directed by modified single-stranded oligonucleotide vectors Nucleic Acids Res. 30 2002 2742 2750
    • (2002) Nucleic Acids Res. , vol.30 , pp. 2742-2750
    • Liu, L.1    Cheng, S.2    Van Brabant, A.J.3    Kmiec, E.B.4
  • 27
    • 13644267927 scopus 로고    scopus 로고
    • Unmodified oligodeoxynucleotides require single-strandedness to induce targeted repair of a chromosomal EGFP gene
    • F. Radecke, S. Radecke, and K. Schwarz Unmodified oligodeoxynucleotides require single-strandedness to induce targeted repair of a chromosomal EGFP gene J. Gene Med. 6 2004 1257 1271
    • (2004) J. Gene Med. , vol.6 , pp. 1257-1271
    • Radecke, F.1    Radecke, S.2    Schwarz, K.3
  • 28
    • 0042878534 scopus 로고    scopus 로고
    • A comparison of gene repair strategies in cell culture using a lacZ reporter system
    • H.D. Nickerson, and W.H. Colledge A comparison of gene repair strategies in cell culture using a lacZ reporter system Gene Ther. 10 2003 1584 1591
    • (2003) Gene Ther. , vol.10 , pp. 1584-1591
    • Nickerson, H.D.1    Colledge, W.H.2
  • 29
    • 0344668833 scopus 로고    scopus 로고
    • Identification of factors influencing strand bias in oligonucleotide- mediated recombination in Escherichia coli
    • X.T. Li, N. Costantino, L.Y. Lu, D.P. Liu, R.M. Watt, K.S. Cheah, D.L. Court, and J.D. Huang Identification of factors influencing strand bias in oligonucleotide-mediated recombination in Escherichia coli Nucleic Acids Res. 31 2003 6674 6687
    • (2003) Nucleic Acids Res. , vol.31 , pp. 6674-6687
    • Li, X.T.1    Costantino, N.2    Lu, L.Y.3    Liu, D.P.4    Watt, R.M.5    Cheah, K.S.6    Court, D.L.7    Huang, J.D.8
  • 30
    • 0035810938 scopus 로고    scopus 로고
    • High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides
    • H.M. Ellis, D. Yu, T. DiTizio, and D.L. Court High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides Proc. Natl. Acad. Sci. USA 98 2001 6742 6746
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 6742-6746
    • Ellis, H.M.1    Yu, D.2    Ditizio, T.3    Court, D.L.4
  • 31
    • 0037705453 scopus 로고    scopus 로고
    • Transcription affects formation and processing of intermediates in oligonucleotide-mediated gene alteration
    • O. Igoucheva, V. Alexeev, M. Pryce, and K. Yoon Transcription affects formation and processing of intermediates in oligonucleotide-mediated gene alteration Nucleic Acids Res. 31 2003 2659 2670
    • (2003) Nucleic Acids Res. , vol.31 , pp. 2659-2670
    • Igoucheva, O.1    Alexeev, V.2    Pryce, M.3    Yoon, K.4
  • 32
    • 0036097061 scopus 로고    scopus 로고
    • Strand bias in targeted gene repair is influenced by transcriptional activity
    • L. Liu, M.C. Rice, M. Drury, S. Cheng, H. Gamper, and E.B. Kmiec Strand bias in targeted gene repair is influenced by transcriptional activity Mol. Cell. Biol. 22 2002 3852 3863
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 3852-3863
    • Liu, L.1    Rice, M.C.2    Drury, M.3    Cheng, S.4    Gamper, H.5    Kmiec, E.B.6
  • 33
    • 4444335574 scopus 로고    scopus 로고
    • DNA replication and transcription direct a DNA strand bias in the process of targeted gene repair in mammalian cells
    • E.E. Brachman, and E.B. Kmiec DNA replication and transcription direct a DNA strand bias in the process of targeted gene repair in mammalian cells J. Cell Sci. 117 2004 3867 3874
    • (2004) J. Cell Sci. , vol.117 , pp. 3867-3874
    • Brachman, E.E.1    Kmiec, E.B.2
  • 35
    • 0036773706 scopus 로고    scopus 로고
    • Targeted nucleotide exchange in Saccharomyces cerevisiae directed by short oligonucleotides containing locked nucleic acids
    • H. Parekh-Olmedo, M. Drury, and E.B. Kmiec Targeted nucleotide exchange in Saccharomyces cerevisiae directed by short oligonucleotides containing locked nucleic acids Chem. Biol. 9 2002 1073 1084
    • (2002) Chem. Biol. , vol.9 , pp. 1073-1084
    • Parekh-Olmedo, H.1    Drury, M.2    Kmiec, E.B.3
  • 36
    • 0037212097 scopus 로고    scopus 로고
    • Nucleotide replacement at two sites can be directed by modified single-stranded oligonucleotides in vitro and in vivo
    • S. Agarwal, H.B. Gamper, and E.B. Kmiec Nucleotide replacement at two sites can be directed by modified single-stranded oligonucleotides in vitro and in vivo Biomol. Eng. 20 2003 7 20
    • (2003) Biomol. Eng. , vol.20 , pp. 7-20
    • Agarwal, S.1    Gamper, H.B.2    Kmiec, E.B.3
  • 38
    • 0037297322 scopus 로고    scopus 로고
    • Targeted nucleotide repair of cyc1 mutations in Saccharomyces cerevisiae directed by modified single-stranded DNA oligonucleotides
    • E.E. Brachman, and E.B. Kmiec Targeted nucleotide repair of cyc1 mutations in Saccharomyces cerevisiae directed by modified single-stranded DNA oligonucleotides Genetics 163 2003 527 538
    • (2003) Genetics , vol.163 , pp. 527-538
    • Brachman, E.E.1    Kmiec, E.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.