An archaeal antioxidant: Characterization of a Dps-like protein from Sulfolobus solfataricus

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 30, 2005, Pages 10551-10556

  Wiedenheft, Blake ^a   Mosolf, Jesse ^a   Willits, Deborah ^a   Yeager, Mark ^b,c   Dryden, Kelly A ^c   Young, Mark ^a   Douglas, Trevor ^a  

^a MONTANA STATE UNIVERSITY   (United States)

^b Division of Cardiovascular Diseases

^c SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

Biomineralization; Ferritin; Hyperthermophile; Iron; Oxidative stress

Indexed keywords

ANTIOXIDANT; BACTERIAL PROTEIN; CARBOXYLIC ACID DERIVATIVE; DNA; DNA BINDING PROTEIN FROM NUTRIENT STARVED CELL LIKE PROTEIN; FERRITIN; IRON; NUCLEIC ACID; OXYGEN; REACTIVE OXYGEN METABOLITE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARCHAEBACTERIUM; ARTICLE; ATMOSPHERE; BACTERIAL GENOME; BACTERIUM CULTURE; BIOMINERALIZATION; DNA BINDING; EVOLUTION; IN VITRO STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATIVE STRESS; PREDICTION; PRIMORDIUM; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; SULFOLOBUS SOLFATARICUS; TOXICITY;

ANTIOXIDANTS; BLOTTING, NORTHERN; BLOTTING, WESTERN; CLONING, MOLECULAR; COMPUTATIONAL BIOLOGY; DNA PRIMERS; DNA-BINDING PROTEINS; EVOLUTION, MOLECULAR; HYDROGEN PEROXIDE; MICROSCOPY, ELECTRON; OXIDATIVE STRESS; PHYLOGENY; PROTEIN CONFORMATION; SEQUENCE ANALYSIS, DNA; SULFOLOBUS SOLFATARICUS;

ARCHAEA; SULFOLOBUS SOLFATARICUS;

EID: 23044449394     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0501497102     Document Type: Article

References (51)

1. Touati, D., Jacques, M., Tardat, B., Bouchard, L. & Despied, S. (1995) J. Bacteriol. 177, 2305-2314.
2. Chen, L., James, L. P. & Helmann, J. D. (1993) J. Bacteriol. 175, 5428-5437.
3. Chen, L. & Helmann, J. D. (1995) Mol. Microbiol. 18, 295-300.
4. Jenney, F. E., Jr., Verhagen, M. F. J. M., Cui, X. Y. & Adams, M. W. W. (1999) Science 286, 306-309.
5. Imlay, J. A. (2003) Annu. Rev. Microbiol. 57, 395-418.
6. Massey, V. (1994) J. Biol. Chem. 269, 22459-22462.
7. Sawyer, D. T. & Valentine, J. S. (1981) Acc. Chem. Res. 14, 393-400.
8. Liochev, S. I. & Fridovich, I. (1994) Free Radical Biol. Med. 16, 29-33.
9. Liochev, S. I. (1996) Free Radical Res. 25, 369-384.
10. Flint, D. H., Tuminello, J. F. & Emptage, M. H. (1993) J. Biol. Chem. 268, 22369-22376.
11. Sawyer, D. T., Sobkowiak, A. & Matsushita, T. (1996) Acc. Chem. Res. 29, 409-416.
12. McCord, J. M. & Fridovic, I. (1969) J. Biol. Chem. 244, 6049-6055.
13. Adams, M. W. W., Jenney, F. E., Jr., Clay, M. D. & Johnson, M. K. (2002) J. Biol. Inorg. Chem. 7, 647-652.
14. Kehrer, J. P. (2000) Toxicology 149, 43-50.
15. Almiron, M., Link, A. J., Furlong, D. & Kolter, R. (1992) Genes Dev. 6, 2646-2654.
16. Zhao, G., Ceci, P., Ilari, A., Giangiacomo, L., Laue, T. M., Chiancone, E. & Chasteen, N. D. (2002) J. Biol. Chem. 277, 27689-27696.
17. Su, M., Cavallo, S., Stefanini, S., Chiancone, E. & Chasteen, N. D. (2005) Biochemistry 44, 5572-5578.
18. She, Q., Singh, R. K., Confalonieri, F., Zivanovic, Y., Allard, G., Awayez, M. J., Chan-Weiher, C. C.-Y., Clausen, I. G., Curtis, B. A., De Moors, A., et al. (2001) Proc. Natl. Acad. Sci. USA 98, 7835-7840.
19. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J. H., Zhang, Z., Miller, W. & Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
20. Stein, J. L., Marsh, T. L., Wu, K. Y., Shizuya, H. & DeLong, E. F. (1996) J. Bacteriol. 178, 591-599.
21. Kelley, L. A., MacCallum, R. M. & Sternberg, M. J. E. (2000) J. Mol. Biol. 299, 499-520.
22. Jeanmougin, F., Thompson, J. D., Gouy, M., Higgins, D. G. & Gibson, T. J. (1998) Trends Biochem. Sci. 23, 403-405.
23. Swofford, D. L. (2001) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods) (Sinauer, Sunderland, MA), Version 4.0b10.
24. Zillig, W., Kietzin, A., Schleper, C., Holz, I., Janekovic, D., Hain, J., Lanzendorfer, M. & Kristjansson, J. K. (1994) Syst. Appl. Microbiol. 16, 609-628.
25. Maniatis, T., Fritsch, E. F. & Shambrook, J. (1982) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab. Press, Plainview, NY).
26. Stedman, K. M., Schleper, C., Rumpf, E. & Zillig, W. (1999) Genetics 152, 1397-1405.
27. Cornell, R. M. & Schwertmann, U. (2003) The Iron Oxides (Wiley-VCH Verlag, Weinheim, Germany).
28. Allen, M., Willits, D., Young, M. & Douglas, T. (2003) Inorg. Chem. 42, 6300-6305.
29. Baker, T. S. & Cheng, R. H. (1996) J. Struct. Biol. 116, 120-130.
30. Conway, J. F., Cheng, N., Zlotnick, A., Vingfield, P. T., Stahl, S. J. & Steven, A. C. (1997) Nature 386, 91-94.
31. Ilari, A., Siefanini, S., Chiancone, E. & Tsernoglou, D. (2000) Nat. Struct. Biol. 7, 38-43.
32. Bozzi, M., Mignogna, G., Stefanini, S., Barra, D., Longhi, C., Valenti, P. & Chiancone, E. (1997) J. Biol. Chem. 272, 3259-3265.
33. Grant, R. A., Filman, D. J., Finkel, S. E., Kolter, R. & Hogle, J. M. (1998) Nat. Struct. Biol. 5, 294-303.
34. Polidoro, M., De Biase, D., Montagnini, B., Guarrera, L., Cavallo, S., Valenti, P., Stefanini, S. & Chiancone, E. (2002) Gene 296, 121-128.
35. Zeth, K., Offermann, S., Essen, L.-O. & Oesterhelt, D. (2004) Proc. Natl. Acad. Sci. USA 101, 13780-13785.
36. Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D. & Vijayan, M. (2004) J. Mol. Biol. 339, 1103-1113.
37. Ren, B., Tibbelin, G., Kajino, T., Asami, O. & Ladenstein, R. (2003) J. Mol. Biol. 329, 467-477.
38. Ceci, P., Cellai, S., Falvo, E., Rivetti, C., Rossi, G. L. & Chiancone, E. (2004) Nucleic Acids Res. 32, 5935-5944.
39. Reindel, S., Schmidt, C. L., Anemuller, S. & Matzanke, B. F. (2002) Biochem. Soc. Trans. 30, 713-715.
40. Reindel, S., Anemuller, S., Sawaryn, A. & Matzanke, B. F. (2002) Biochim. Biophys. Acta 1598, 140-146.
41. Kauko, A., Haataja, S., Pulliainen, A. T., Finne, J. & Papageorgiou, A. C. (2004) J. Mol. Biol. 338, 547-558.
42. Poole, L. B. (2005) Arch. Biochem. Biophys. 433, 240-254.
43. Kengen, S. W. M., Bikker, F. J., Hagen, W. R., de Vos, W. M. & van der Oost, J. (2001) Extremophiles 5, 323-332.
44. Mongkolsuk, S. & Helmann, J. D. (2002) Mol. Microbiol. 45, 9-15.
45. Pedone, E., Bartolucci, S. & Fiorentino, G. (2004) Front. Biosci. 9, 2909-2926.
46. Amo, T., Atomi, H. & Imanaka, T. (2002) J. Bacteriol. 184, 3305-3312.
47. Ueshima, J., Shoji, M., Ratnayake, D. B., Abe, K., Yoshida, S., Yamamoto, K. & Nakayama, K. (2003) Infect. Immun. 71, 1170-1178.
48. Nair, S. & Finkel, S. E. (2004) J. Bacteriol. 186, 4192-4198.
49. Park, C. B. & Lee, S. B. (1999) J. Biosci. Bioeng. 87, 315-319.
50. Nakamura, Y., Kaneko, T., Sato, S., Mimuro, M., Miyashita, H., Tsuchiya, T., Sasamoto, S., Watanabe, A., Kawashima, K., Kishila, Y., et al. (2003) DNA Res. 10, 137-145.
51. Grossman, M. J., Hinton, S. M., Minal-Bernero, V., Slaughter, C. & Stiefel, E. I. (1992) Proc. Natl. Acad. Sci. USA 89, 2419-2423.