메뉴 건너뛰기




Volumn 2, Issue 2, 2005, Pages 83-101

Attribute clustering for grouping, selection, and classification of gene expression data

Author keywords

Attribute clustering; Data mining; Gene expression classification; Gene selection; Microarray analysis

Indexed keywords

ALGORITHMS; DATA MINING; DYNAMIC PROGRAMMING; FUNCTIONS; ITERATIVE METHODS; MATHEMATICAL MODELS; OPTIMIZATION; SET THEORY;

EID: 22944482840     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2005.17     Document Type: Article
Times cited : (167)

References (63)
  • 6
    • 0037390557 scopus 로고    scopus 로고
    • Mining fuzzy association rules in a bank-account database
    • W.-H. Au and K.C. C. Chan, "Mining Fuzzy Association Rules in a Bank-Account Database," IEEE Trans. Fuzzy Systems, vol. 11, no. 2, pp. 238-248, 2003.
    • (2003) IEEE Trans. Fuzzy Systems , vol.11 , Issue.2 , pp. 238-248
    • Au, W.-H.1    Chan, K.C.C.2
  • 7
    • 0345872225 scopus 로고    scopus 로고
    • A novel evolutionary data mining algorithm with applications to churn prediction
    • W.-H. Au, K.C.C. Chan, and X. Yao, "A Novel Evolutionary Data Mining Algorithm with Applications to Churn Prediction," IEEE Trans. Evolutionary Computation, vol. 7, no. 6, pp. 532-545, 2003.
    • (2003) IEEE Trans. Evolutionary Computation , vol.7 , Issue.6 , pp. 532-545
    • Au, W.-H.1    Chan, K.C.C.2    Yao, X.3
  • 11
    • 0002520670 scopus 로고    scopus 로고
    • Mining fuzzy association rules in a database containing relational and transactional data
    • A. Kandel, M. Last, and H. Bunke, eds., New York: Physica-Verlag
    • K.C.C. Chan and W.-H. Au, "Mining Fuzzy Association Rules in a Database Containing Relational and Transactional Data," Data Mining and Computational Intelligence, A. Kandel, M. Last, and H. Bunke, eds., pp. 95-114, New York: Physica-Verlag, 2001.
    • (2001) Data Mining and Computational Intelligence , pp. 95-114
    • Chan, K.C.C.1    Au, W.-H.2
  • 12
    • 84990556423 scopus 로고
    • APACS: A system for the automatic analysis and classification of conceptual patterns
    • K.C.C. Chan and A.K.C. Wong, "APACS: A System for the Automatic Analysis and Classification of Conceptual Patterns," Computational Intelligence, vol. 6, no. 3, pp. 119-131, 1990.
    • (1990) Computational Intelligence , vol.6 , Issue.3 , pp. 119-131
    • Chan, K.C.C.1    Wong, A.K.C.2
  • 13
    • 0000417939 scopus 로고
    • A statistical technique for extracting classificatory knowledge from databases
    • G. Piatetsky-Shapiro and W.J. Frawley, eds., Cambridge, Mass.: AAAI/MIT Press
    • K.C.C. Chan and A.K.C. Wong, "A Statistical Technique for Extracting Classificatory Knowledge from Databases," Knowledge Discovery in Databases, G. Piatetsky-Shapiro and W.J. Frawley, eds., Cambridge, Mass.: AAAI/MIT Press, pp. 107-123, 1991.
    • (1991) Knowledge Discovery in Databases , pp. 107-123
    • Chan, K.C.C.1    Wong, A.K.C.2
  • 15
    • 9544246751 scopus 로고    scopus 로고
    • Multiple pattern associations for interpreting structural and functional characteristics of biomolecules
    • D.K.Y. Chiu and A.K.C. Wong, "Multiple Pattern Associations for Interpreting Structural and Functional Characteristics of Biomolecules," Information Sciences, vol. 167, pp. 23-39, 2004.
    • (2004) Information Sciences , vol.167 , pp. 23-39
    • Chiu, D.K.Y.1    Wong, A.K.C.2
  • 16
    • 0037395289 scopus 로고    scopus 로고
    • Fuzzy association rules: General model and applications
    • M. Delgado, N. Marín, D. Sánchez, and M.-A. Vila, "Fuzzy Association Rules: General Model and Applications," IEEE Trans. Fuzzy Systems, vol. 11, no. 2, pp. 214-225, 2003.
    • (2003) IEEE Trans. Fuzzy Systems , vol.11 , Issue.2 , pp. 214-225
    • Delgado, M.1    Marín, N.2    Sánchez, D.3    Vila, M.-A.4
  • 17
    • 0036080361 scopus 로고    scopus 로고
    • Adaptive quality-based clustering of gene expression profiles
    • F. De Smet, J. Mathys, K. Marchal, G. Thijs, B. De Moor, and Y. Moreau, "Adaptive Quality-Based Clustering of Gene Expression Profiles," Bioinformatics, vol. 18, no. 5, pp. 735-746, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.5 , pp. 735-746
    • De Smet, F.1    Mathys, J.2    Marchal, K.3    Thijs, G.4    De Moor, B.5    Moreau, Y.6
  • 18
    • 84960463485 scopus 로고    scopus 로고
    • Minimum redundancy feature selection from microarray gene expression data
    • C. Ding and H. Peng, "Minimum Redundancy Feature Selection from Microarray Gene Expression Data," Proc. IEEE Computational Systems Bioinformatics Conf., pp. 523-528, 2003.
    • (2003) Proc. IEEE Computational Systems Bioinformatics Conf. , pp. 523-528
    • Ding, C.1    Peng, H.2
  • 19
    • 0037273544 scopus 로고    scopus 로고
    • Cluster analysis of gene expression data
    • E. Domany, "Cluster Analysis of Gene Expression Data," J. Statistical Physics, vol. 110, pp. 1117-1139, 2003.
    • (2003) J. Statistical Physics , vol.110 , pp. 1117-1139
    • Domany, E.1
  • 20
    • 0036489046 scopus 로고    scopus 로고
    • Comparison of discrimination methods for the classification of tumors using gene expression data
    • S. Dudoit, J. Fridlyand, and T.P. Speed, "Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data," J. Am. Statistical Assoc., vol. 97, no. 457, pp. 77-87, 2002.
    • (2002) J. Am. Statistical Assoc. , vol.97 , Issue.457 , pp. 77-87
    • Dudoit, S.1    Fridlyand, J.2    Speed, T.P.3
  • 25
    • 0032729435 scopus 로고    scopus 로고
    • Exploring expression data: Identification and analysis of coexpressed genes
    • L.J. Heyer, S. Kruglyak, and S. Yooseph, "Exploring Expression Data: Identification and Analysis of Coexpressed Genes," Genome Research, vol. 9, pp. 1106-1115, 1999.
    • (1999) Genome Research , vol.9 , pp. 1106-1115
    • Heyer, L.J.1    Kruglyak, S.2    Yooseph, S.3
  • 26
    • 0033363463 scopus 로고    scopus 로고
    • Fuzzy computing for data mining
    • K. Hirota and W. Pedrycz, "Fuzzy Computing for Data Mining," Proc. IEEE, vol. 87, no. 9, pp. 1575-1600, 1999.
    • (1999) Proc. IEEE , vol.87 , Issue.9 , pp. 1575-1600
    • Hirota, K.1    Pedrycz, W.2
  • 29
    • 13844276694 scopus 로고    scopus 로고
    • Cluster analysis for gene expression data: A survey
    • Nov.
    • D. Jiang, C. Tang, and A. Zhang, "Cluster Analysis for Gene Expression Data: A Survey," IEEE Trans. Knowledge and Data Eng., vol. 16, no. 11, pp. 1370-1386, Nov. 2004.
    • (2004) IEEE Trans. Knowledge and Data Eng. , vol.16 , Issue.11 , pp. 1370-1386
    • Jiang, D.1    Tang, C.2    Zhang, A.3
  • 30
    • 0001891562 scopus 로고    scopus 로고
    • On linguistic approaches in flexible querying and mining of association rules
    • H.L. Larsen, J. Kacprzyk, S. Zadrozny, T. Andreasen, and H. Christiansen, eds., Physica-Verlag
    • J. Kacprzyk and S. Zadrozny, "On Linguistic Approaches in Flexible Querying and Mining of Association Rules," Flexible Query Answering Systems: Recent Advances, H.L. Larsen, J. Kacprzyk, S. Zadrozny, T. Andreasen, and H. Christiansen, eds., pp. 475-484, Physica-Verlag, 2001.
    • (2001) Flexible Query Answering Systems: Recent Advances , pp. 475-484
    • Kacprzyk, J.1    Zadrozny, S.2
  • 31
    • 0003668558 scopus 로고    scopus 로고
    • Bayesian classification of DNA array expression data
    • Dept. of Computer Science and Eng., Univ. of Washington
    • A.D. Keller, M. Schummer, L. Hood, and W.L. Ruzzo, "Bayesian Classification of DNA Array Expression Data," Technical Report UW-CSE-2000-08-01, Dept. of Computer Science and Eng., Univ. of Washington, 2000.
    • (2000) Technical Report , vol.UW-CSE-2000-08-01
    • Keller, A.D.1    Schummer, M.2    Hood, L.3    Ruzzo, W.L.4
  • 34
    • 0036083435 scopus 로고    scopus 로고
    • Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns
    • J. Li and L. Wong, "Identifying Good Diagnostic Gene Groups from Gene Expression Profiles Using the Concept of Emerging Patterns," Bioinformatics, vol. 18, no. 5, pp. 725-734, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.5 , pp. 725-734
    • Li, J.1    Wong, L.2
  • 35
    • 0036083435 scopus 로고    scopus 로고
    • Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns
    • J. Li and L. Wong, "Identifying Good Diagnostic Gene Groups from Gene Expression Profiles Using the Concept of Emerging Patterns (Corrigendum)," Bioinformatics, vol. 18, no. 10, pp. 1406-1407, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.10 , pp. 1406-1407
    • Li, J.1    Wong, L.2
  • 37
    • 22944432786 scopus 로고    scopus 로고
    • A global optimal algorithm for class-dependent discretization of continuous data
    • L. Liu, A.K.C. Wong, and Y. Wang, "A Global Optimal Algorithm for Class-Dependent Discretization of Continuous Data," Intelligent Data Analysis, vol. 8, no. 2, pp. 151-170, 2004.
    • (2004) Intelligent Data Analysis , vol.8 , Issue.2 , pp. 151-170
    • Liu, L.1    Wong, A.K.C.2    Wang, Y.3
  • 38
    • 0037623370 scopus 로고    scopus 로고
    • Cancer classification using gene expression data
    • Y. Lu and J. Han, "Cancer Classification Using Gene Expression Data," Information Systems, vol. 28, pp. 243-268, 2003.
    • (2003) Information Systems , vol.28 , pp. 243-268
    • Lu, Y.1    Han, J.2
  • 40
    • 0001129145 scopus 로고    scopus 로고
    • Information-theoretic fuzzy approach to knowledge discovery in databases
    • R. Roy, T. Furuhashi, and P.K. Chawdhry, eds., Springer-Verlag
    • O. Maimon, A. Kandel, and M. Last, "Information-Theoretic Fuzzy Approach to Knowledge Discovery in Databases," Advances in Soft Computing-Engineering Design and Manufacturing, R. Roy, T. Furuhashi, and P.K. Chawdhry, eds., pp. 315-326, Springer-Verlag, 1999.
    • (1999) Advances in Soft Computing-engineering Design and Manufacturing , pp. 315-326
    • Maimon, O.1    Kandel, A.2    Last, M.3
  • 44
    • 0035999977 scopus 로고    scopus 로고
    • A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments
    • W. Pan, "A Comparative Review of Statistical Methods for Discovering Differentially Expressed Genes in Replicated Microarray Experiments," Bioinformatics, vol. 18, pp. 546-554, 2002.
    • (2002) Bioinformatics , vol.18 , pp. 546-554
    • Pan, W.1
  • 51
    • 5344247436 scopus 로고    scopus 로고
    • Supervised analysis when the number of candidate features (p) greatly exceeds the number of cases (n)
    • R. Simon, "Supervised Analysis when the Number of Candidate Features (p) Greatly Exceeds the Number of Cases (n)," SIGKDD Explorations, vol. 5, no. 2, pp. 31-36, 2003.
    • (2003) SIGKDD Explorations , vol.5 , Issue.2 , pp. 31-36
    • Simon, R.1
  • 52
    • 0026902042 scopus 로고
    • An information theoretic approach to rule induction from databases
    • P. Smyth and R.M. Goodman, "An Information Theoretic Approach to Rule Induction from Databases," IEEE Trans. Knowledge and Data Eng., vol. 4, no. 4, pp. 301-316, 1992.
    • (1992) IEEE Trans. Knowledge and Data Eng. , vol.4 , Issue.4 , pp. 301-316
    • Smyth, P.1    Goodman, R.M.2
  • 55
    • 0018480519 scopus 로고
    • Classification of discrete-valued data with feature space transformation
    • C.C. Wang and A.K.C. Wong, "Classification of Discrete-Valued Data with Feature Space Transformation," IEEE Trans. Automatic Control, vol. 24, no. 3, pp. 434-437, 1979.
    • (1979) IEEE Trans. Automatic Control , vol.24 , Issue.3 , pp. 434-437
    • Wang, C.C.1    Wong, A.K.C.2
  • 56
    • 0016472476 scopus 로고
    • Typicality, diversity and feature patterns of an ensemble
    • Feb.
    • A.K.C. Wong and T.S. Liu, "Typicality, Diversity and Feature Patterns of an Ensemble," IEEE Trans. Computers, vol. 24, no. 2, pp. 158-181, Feb. 1975.
    • (1975) IEEE Trans. Computers , vol.24 , Issue.2 , pp. 158-181
    • Wong, A.K.C.1    Liu, T.S.2
  • 57
    • 0017285330 scopus 로고
    • Statistical analysis of residue variability in cytochrome C
    • A.K.C. Wong, T.S. Liu, and C.C. Wang, "Statistical Analysis of Residue Variability in Cytochrome C," J. Molecular Biology, vol. 102, pp. 287-295, 1976.
    • (1976) J. Molecular Biology , vol.102 , pp. 287-295
    • Wong, A.K.C.1    Liu, T.S.2    Wang, C.C.3
  • 58
    • 0031274088 scopus 로고    scopus 로고
    • High-order pattern discovery from discrete-valued data
    • Nov./Dec.
    • A.K.C. Wong and Y. Wang, "High-Order Pattern Discovery from Discrete-Valued Data," IEEE Trans. Knowledge and Data Eng., vol. 9, no. 6, pp. 877-893, Nov./Dec. 1997.
    • (1997) IEEE Trans. Knowledge and Data Eng. , vol.9 , Issue.6 , pp. 877-893
    • Wong, A.K.C.1    Wang, Y.2
  • 61
    • 0002350972 scopus 로고
    • On linguistic summaries of data
    • G. Piatetsky-Shapiro and W.J. Frawley, eds., Cambridge, Mass.: AAAI/MIT Press
    • R.R. Yager, "On Linguistic Summaries of Data," Knowledge Discovery in Databases, G. Piatetsky-Shapiro and W.J. Frawley, eds., pp. 347-363, Cambridge, Mass.: AAAI/MIT Press, 1991.
    • (1991) Knowledge Discovery in Databases , pp. 347-363
    • Yager, R.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.