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Volumn 3303, Issue , 2004, Pages 69-83

Functional data analysis of the dynamics of gene regulatory networks

Author keywords

Bayesian networks; Functional data analysis; P spline; Smoothing; Time series gene expression data

Indexed keywords

ALGORITHMS; DATA REDUCTION; DNA; FUNCTIONS; MATHEMATICAL MODELS; PROBLEM SOLVING; REGRESSION ANALYSIS; TIME SERIES ANALYSIS; AUTOCORRELATION; BAYESIAN NETWORKS; DATA HANDLING; GENES; INFORMATION ANALYSIS; INFORMATION SCIENCE; INTELLIGENT SYSTEMS; KNOWLEDGE BASED SYSTEMS; MONTE CARLO METHODS; RANDOM VARIABLES; TIME SERIES; YEAST;

EID: 22944434182     PISSN: 03029743     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1007/978-3-540-30478-4_7     Document Type: Conference Paper
Times cited : (4)

References (24)
  • 1
    • 0032616683 scopus 로고    scopus 로고
    • Identification of genetic networks from a small number of gene expression patterns under the Boolean network model
    • Akutsu,T., Miyano,S. and Kuhara,S.: Identification of genetic networks from a small number of gene expression patterns under the Boolean network model. Pac. Symp. Biocomput. 4 (1999) 17-28.
    • (1999) Pac. Symp. Biocomput. , vol.4 , pp. 17-28
    • Akutsu, T.1    Miyano, S.2    Kuhara, S.3
  • 2
    • 22944476662 scopus 로고    scopus 로고
    • Bayesian network and radial basis function network regression for nonlinear modeling of genetic network
    • in press
    • Ando.T., Imoto,S. and Miyano,S.: Bayesian network and radial basis function network regression for nonlinear modeling of genetic network. Proc. International Conference on Information 2004. (in press).
    • Proc. International Conference on Information 2004
    • Ando, T.1    Imoto, S.2    Miyano, S.3
  • 3
    • 0032611513 scopus 로고    scopus 로고
    • Modeling gene expression with differential equations
    • Chen,T., He,H.L. and Church,G.M.: Modeling gene expression with differential equations. Pac. Symp. Biocomput. 4 (1999) 29.
    • (1999) Pac. Symp. Biocomput. , vol.4 , pp. 29
    • Chen, T.1    He, H.L.2    Church, G.M.3
  • 4
    • 25444532788 scopus 로고    scopus 로고
    • Flexible smoothing with B-splines and penalties
    • Eilers,P.H.C. and Marx,B.D.: Flexible smoothing with B-splines and penalties (with discussion). Statistical Science 11 (1996) 89-121.
    • (1996) Statistical Science , vol.11 , pp. 89-121
    • Eilers, P.H.C.1    Marx, B.D.2
  • 5
    • 0031865933 scopus 로고    scopus 로고
    • DNA replication is completed in Saccharomyces cerevisiae cells that lack functional Cdc14, a dual-specificity protein phosphatase
    • Fitzpatrick,P.J., Toyn,J.H., Millar,J.B., Johnston,L.H.: DNA replication is completed in Saccharomyces cerevisiae cells that lack functional Cdc14, a dual-specificity protein phosphatase. Mol. Gen. Genet. 258 (1998) 437-441.
    • (1998) Mol. Gen. Genet. , vol.258 , pp. 437-441
    • Fitzpatrick, P.J.1    Toyn, J.H.2    Millar, J.B.3    Johnston, L.H.4
  • 7
    • 0033707946 scopus 로고    scopus 로고
    • Using Bayesian network to analyze expression data
    • Friedman,N., Linial,M., Nachman,I. and Pe'er,D.: Using Bayesian network to analyze expression data. J. Comp. Biol. 7 (2000) 601-620.
    • (2000) J. Comp. Biol. , vol.7 , pp. 601-620
    • Friedman, N.1    Linial, M.2    Nachman, I.3    Pe'er, D.4
  • 10
    • 0035221560 scopus 로고    scopus 로고
    • Using graphical models and genomic expression data to statistically validate models of genetic regulatory networks
    • Hartemink,A.J., Gifford,D.K., Jaakkola,T.S. and Young,R.A.: Using graphical models and genomic expression data to statistically validate models of genetic regulatory networks. Pac. Symp. Biocomput. 6 (2001) 422-433.
    • (2001) Pac. Symp. Biocomput. , vol.6 , pp. 422-433
    • Hartemink, A.J.1    Gifford, D.K.2    Jaakkola, T.S.3    Young, R.A.4
  • 12
    • 0035866279 scopus 로고    scopus 로고
    • A novel multiple affinity purification tag and its use in identification of proteins associated with a cyclin-CDK complex
    • Honey,S., Schneider,B.L., Schieltz,D.M., Yates,J.R. and Futcher,B.: A novel multiple affinity purification tag and its use in identification of proteins associated with a cyclin-CDK complex. Nucleic Acids Res. 15 (2001) E24.
    • (2001) Nucleic Acids Res. , vol.15
    • Honey, S.1    Schneider, B.L.2    Schieltz, D.M.3    Yates, J.R.4    Futcher, B.5
  • 13
    • 0036372453 scopus 로고    scopus 로고
    • Estimation of genetic networks and functional structures between genes by using Bayesian network and nonparametric regression
    • Imoto,S., Goto,T. and Miyano,S.: Estimation of genetic networks and functional structures between genes by using Bayesian network and nonparametric regression. Pac. Symp. Biocomput. 7 (2002) 175-186.
    • (2002) Pac. Symp. Biocomput. , vol.7 , pp. 175-186
    • Imoto, S.1    Goto, T.2    Miyano, S.3
  • 15
    • 0001781878 scopus 로고
    • Automatic smoothing of regression functions in generalized linear models
    • O'Sullivan,F., Yandell,B.S. and Raynor,W.J.: Automatic smoothing of regression functions in generalized linear models. J. Am. Statist. Assoc. 81 (1986) 96-103.
    • (1986) J. Am. Statist. Assoc. , vol.81 , pp. 96-103
    • O'Sullivan, F.1    Yandell, B.S.2    Raynor, W.J.3
  • 16
    • 18144442687 scopus 로고    scopus 로고
    • Inferring subnetworks from perturbed expression profiles
    • Pe'er,D., Regev,A., Elidan,G. and Friedman,N.: Inferring subnetworks from perturbed expression profiles Bioinformatics 17 (2001) 215-224.
    • (2001) Bioinformatics , vol.17 , pp. 215-224
    • Pe'er, D.1    Regev, A.2    Elidan, G.3    Friedman, N.4
  • 19
    • 0033854055 scopus 로고    scopus 로고
    • Cksl is required for G1 cyclin-cyclin-dependent kinase activity in budding yeast
    • Reynard,G.J., Reynolds,W., Verma,R. and Deshaies,R.J.: Cksl Is Required for G1 Cyclin-Cyclin-Dependent Kinase Activity in Budding Yeast. Mol. Cell Biol. 20 (2000) 5858-5864.
    • (2000) Mol. Cell Biol. , vol.20 , pp. 5858-5864
    • Reynard, G.J.1    Reynolds, W.2    Verma, R.3    Deshaies, R.J.4
  • 20
    • 0030738748 scopus 로고    scopus 로고
    • Yeast Hct1 is a regulator of Clb2 cyclin proteolysis
    • Schwab.M., Lutum,A.S. and Seufertm,W.: Yeast Hct1 is a regulator of Clb2 cyclin proteolysis. Cell 90 (1997) 683-693.
    • (1997) Cell , vol.90 , pp. 683-693
    • Schwab, M.1    Lutum, A.S.2    Seufertm, W.3
  • 21
    • 0036184629 scopus 로고    scopus 로고
    • Probabilistic Boolean networks: A rule-based uncertainty model for gene regulatory networks
    • Shmulevich,E.R., Dougherty,S. and Kim,W.Z.: Probabilistic Boolean Networks: A Rule-based Uncertainty Model for Gene Regulatory Networks. Bioinformatics 18 (2002) 261-274.
    • (2002) Bioinformatics , vol.18 , pp. 261-274
    • Shmulevich, E.R.1    Dougherty, S.2    Kim, W.Z.3
  • 22
    • 0000629975 scopus 로고
    • Cross-validatory choise and assessment of statistical predictions
    • Stone,C.J.: Cross-validatory choise and assessment of statistical predictions (with discussion). J. Roy. Statist. Soc. B. 36 (1974) 111-147.
    • (1974) J. Roy. Statist. Soc. B. , vol.36 , pp. 111-147
    • Stone, C.J.1
  • 24


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.