Towards a structure for a TSG-6·hyaluronan complex by modeling and NMR, spectroscopy: Insights into other members of the link module superfamily

Journal of Biological Chemistry

Volumn 280, Issue 18, 2005, Pages 18189-18201

  Blundell, Charles D ^a,b   Almond, Andrew ^b   Mahoney, David J ^a,b   DeAngelis, Paul L ^c   Campbell, Iain D ^a   Day, Anthony J ^a,b  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b UNIVERSITY OF OXFORD   (United Kingdom)

^c UNIVERSITY OF OKLAHOMA COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; HYDROPHOBICITY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PH; POLYSACCHARIDES; PROTEINS;

ACETAMIDO; SIDE CHAINS; STACKING INTERACTIONS; TYROSINE;

SUGAR (SUCROSE);

CARBOXYLIC ACID; GLUCURONIC ACID; HYALADHERIN; HYALURONIC ACID; POLYSACCHARIDE; PROTEIN; PROTEIN TSG6; PROTEOCHONDROITIN SULFATE; TYROSINE; UNCLASSIFIED DRUG; CELL ADHESION MOLECULE; N ACETYLGLUCOSAMINE; TNFAIP6 PROTEIN, HUMAN;

ARTICLE; COMPLEX FORMATION; GENE; HYDROPHOBICITY; INFLAMMATION; MOLECULAR INTERACTION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; OVULATION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN FOLDING; PROTEIN SECRETION; PROTEIN STRUCTURE; TSG6 GENE; AMINO ACID SEQUENCE; ANIMAL; CHEMICAL STRUCTURE; CHEMISTRY; GENETICS; HUMAN; MALE; METHODOLOGY; MOLECULAR GENETICS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN MOTIF; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; SEQUENCE HOMOLOGY; SHEEP; SITE DIRECTED MUTAGENESIS;

ACETYLGLUCOSAMINE; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; CELL ADHESION MOLECULES; CONSERVED SEQUENCE; HUMANS; HYALURONIC ACID; MAGNETIC RESONANCE SPECTROSCOPY; MALE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; MUTAGENESIS, SITE-DIRECTED; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SEQUENCE HOMOLOGY, AMINO ACID; SHEEP;

EID: 22844432511     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M414343200     Document Type: Article

References (70)

1. Tammi, M. I., Day, A. J., and Turley, E. A. (2002) J. Biol. Chem. 277, 4581-4584
2. Toole, B. P., Wight, T. N., and Tammi, M. I. (2002) J. Biol. Chem. 277, 4593-4596
3. Wight, T. N., and Merrilees, M. J. (2004) Circ. Res. 94, 1158-1167
4. Toole, B. P. (2004) Nat. Rev. Cancer 4, 528-539
5. Day, A. J., and Sheehan, J. K. (2001) Curr. Opin. Struct. Biol. 11, 617-622
6. Day, A. J., and Prestwich, G. D. (2002) J. Biol. Chem. 277, 4585-4588
7. Blundell, C. D., Seyfried, N. T., and Day, A. J. (2004) in Chemistry and Biology of Hyaluronan (Garg, H. G., and Hales, C. A., eds) pp. 189-204, Elsevier Science Ltd., Oxford
8. Kohda, D., Morton, C. J., Parkar, A. A., Hatanaka, H., Inagaki, F. M., Campbell, I. D., and Day, A. J. (1996) Cell 86, 767-775
9. Blundell, C. D., Mahoney, D. J., Almond, A., DeAngelis, P. L., Kahmann, J. D., Teriete, P., Pickford, A. R., Campbell, I. D., and Day, A. J. (2003) J. Biol. Chem. 278, 49261-49270
10. Teriete, P., Banerji, S., Noble, M., Blundell, C. D., Wright, A. J., Pickford, A. R., Lowe, E., Mahoney, D. J., Tammi, M. I., Kahmann, J. D., Campbell, I. D., Day, A. J., and Jackson, D. G. (2004) Mol. Cell 13, 483-496
11. Milner, C. M., and Day, A. J. (2003) J. Cell Sci. 116, 1863-1873
12. Wisniewski, H. G., and Vilcek, J. (2004) Cytokine Growth Factor Rev. 15, 129-146
13. Jackson, D. G. (2003) Trends Cardiovasc. Med. 13, 1-7
14. Spicer, A. P., Joo, A., and Bowling, R. A., Jr. (2003) J. Biol. Chem. 278, 21083-21091
15. Seyfried, N. T., McVey, G. F., Almond, A., Mahoney, D. J., Dudhia, J., and Day, A. J. (2005) J. Biol. Chem. 280, 5435-5448
16. Bayliss, M. T., Howat, S. L., Dudhia, J., Murphy, J. M., Barry, F. P., Edwards, J. C., and Day, A. J. (2001) Osteoarthr. Cartilage 9, 42-48
17. Ye, L., Mora, R., Akhayani, N., Haudenschild, C. C., and Liau, G. (1997) Circ. Res. 81, 289-296
18. Glant, T. T., Kamath, R. V., Bardos, T., Gal, I., Szanto, S., Murad, Y. M., Sandy, J. D., Mort, J. S., Roughley, P. J., and Mikecz, K. (2002) Arthritis Rheum. 46, 2207-2218
19. Mindrescu, C., Dias, A. A., Olszewski, R. J., Klein, M. J., Reis, L. F., and Wisniewski, H. G. (2002) Arthritis Rheum. 46, 2453-2464
20. Szanto, S., Bardos, T., Gal, I., Glant, T. T., and Mikecz, K. (2004) Arthritis Rheum. 50, 3012-3022
21. Carrette, O., Nemade, R. V., Day, A. J., Brickner, A., and Larsen, W. J. (2001) Biol. Reprod. 65, 301-308
22. Mukhopadhyay, D., Hascall, V. C., Day, A. J., Salustri, A., and Fulop, C. (2001) Arch. Biochem. Biophys. 394, 173-181
23. Fujimoto, T., Savani, R. C., Watari, M., Day, A. J., and Strauss, J. F., III (2002) Am. J. Pathol. 160, 1495-1502
24. Fulop, C., Szanto, S., Mukhopadhyay, D., Bardos, T., Kamath, R. V., Rugg, M. S., Day, A. J., Salustri, A., Hascall, V. C., Glant, T. T., and Mikecz, K. (2003) Development (Camb.) 130, 2253-2261
25. Ochsner, S. A., Day, A. J., Rugg, M. S., Breyer, R. M., Gomer, R. H., and Richards, J. S. (2003) Endocrinology 144, 4376-4384
26. Salustri, A., Garlanda, C., Hirsch, E., De Acetis, M., Maccagno, A., Bottazzi, B., Doni, A., Bastone, A., Mantovani, G., Beck Peccoz, P., Salvatori, G., Mahoney, D. J., Day, A. J., Siracusa, G., Romani, L., and Mantovani, A. (2004) Development (Camb.) 131, 1577-1586
27. Day, A. J., Rugg, M. S., Mahoney, D. J., and Milner, C. M. (2004) Hyaluronan 2003 Proceedings, October 11-16, Cleveland, OH, http://www. matrixbiologyinstitute.org/ha03/toc.html
28. Mahoney, D. J., Blundell, C. D., and Day, A. J. (2001) J. Biol. Chem. 276, 22764-22771
29. Blundell, C. D., Kahmann, J. D., Perczel, A., Mahoney, D. J., Cordell, M. R., Teriete, P., Campbell, I. D., and Day, A. J. (2002) in Hyaluronan (Kennedy, J. F., Phillips, G. O., Williams, P. A., and Hascall, V. C., eds) Vol. 1, pp. 161-172, Woodhead Publishing Ltd., Abington Hall, Cambridge, United Kingdom
30. Toffanin, R., Kvam, B. J., Flaibani, A., Atzori, M., Biviano, F., and Paoletti, S. (1993) Carbohydr. Res. 245, 113-128
31. Kogelberg, H., Sous, D., and Jimenez-Barbero, J. (2003) Curr. Opin. Struct. Biol. 13, 646-653
32. Johnson, M. A., and Pinto, B. M. (2004) Carbohydr. Res. 339, 907-928
33. Bush, C. A., Martin-Pastor, M., and Imberty, A. (1999) Annu. Rev. Biophys. Biomol. Struct. 28, 269-293
34. Atkins, E. D., Phelps, C. F., and Sheehan, J. K. (1972) Biochem. J. 128, 1255-1263
35. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., and Karplus, M. (1983) J. Comp. Chem. 4, 187-217
36. Almond, A., Petersen, B. O., and Duus, J. O. (2004) Biochemistry 43, 5853-5863
37. DeAngelis, P. L., Jing, W., Drake, R. R., and Achyuthan, A. M. (1998) J. Biol. Chem. 273, 8454-8458
38. Kahmann, J. D., O'Brien, R., Werner, J. M., Heinegard, D., Ladbury, J. E., Campbell, I. D., and Day, A. J. (2000) Structure 8, 763-774
39. Almond, A., Sheehan, J. K., and Brass, A. (1997) Glycobiology 7, 597-604
40. Almond, A., Brass, A., and Sheehan, J. K. (1998) Glycobiology 8, 973-980
41. Almond, A., Brass, A., and Sheehan, J. K. (2000) J. Phys. Chem. B 104, 5634-5640
42. Blundell, C. D., DeAngelis, P. L., Day, A. J., and Almond, A. (2004) Glycobiology 14, 999-1009
43. Sicinska, W., Adams, B., and Lerner, L. (1993) Carbohydr. Res. 242, 29-51
44. Cowman, M., Hittner, D. M., and Feder-Davis, J. (1996) Macromolecules 29, 2894-2902
45. Holmbeck, S. M. A., Petillo, P. A., and Lerner, L. E. (1994) Biochemistry 33, 14246-14255
46. Cowman, M. K., Cozart, D., Nakanishi, K., and Balazs, E. A. (1984) Arch. Biochem. Biophys. 230, 203-212
47. Thompson, S. E., and Smithrud, D. B. (2002) J. Am. Chem. Soc. 124, 442-449
48. Flocco, M. M., and Mowbray, S. L. (1994) J. Mol. Biol. 235, 709-717
49. Peach, R. J., Hollenbaugh, D., Stamenkovic, I., and Aruffo, A. (1993) J. Cell Biol. 122, 257-264
50. Bajorath, J., Greenfield, B., Munro, S. B., Day, A. J., and Aruffo, A. (1998) J. Biol. Chem. 273, 338-343
51. Prevo, R., Banerji, S., Ni, J., and Jackson, D. G. (2004) J. Biol. Chem. 279, 52580-52592
52. Rauch, U., Hirakawa, S., Oohashi, T., Kappler, J., and Roos, G. (2004) Matrix Biol. 22, 629-639
53. Seyfried, N. T., Blundell, C. D., Day, A. J., and Almond, A. (2005) Glycobiology 15, 303-312
54. Matsumoto, K., Shionyu, M., Go, M., Shimizu, K., Shinomura, T., Kimata, K., and Watanabe, H. (2003) J. Biol. Chem. 278, 41205-41212
55. Watanabe, H., Cheung, S. C., Itano, N., Kimata, K., and Yamada, Y. (1997) J. Biol. Chem. 272, 28057-28065
56. Vyas, N. K. (1991) Curr. Opin. Struct. Biol. 1, 732-740
57. Quiocho, F. A. (1993) Biochem. Soc. Trans. 21, 442-448
58. Weis, W. I., and Drickamer, K. (1996) Ann. Rev. Biochem. 65, 441-473
59. Ponnuraj, K., and Jedrzejas, M. J. (2000) J. Mol. Biol. 299, 885-895
60. Li, S., Kelly, S. J., Lamani, E., Ferraroni, M., and Jedrzejas, M. J. (2000) EMBO J. 19, 1228-1240
61. Jedrzejas, M. J., Mello, L. V., de Groot, B. L., and Li, S. (2002) J. Biol. Chem. 277, 28287-28297
62. Nukui, M., Taylor, K. B., McPherson, D. T., Shigenaga, M. K., and Jedrzejas, M. J. (2003) J. Biol. Chem. 278, 3079-3088
63. Li, S., and Jedrzejas, M. J. (2001) J. Biol. Chem. 276, 41407-41416
64. Mello, L. V., de Groot, B. L., Li, S., and Jedrzejas, M. J. (2002) J. Biol. Chem. 277, 36678-36688
65. Markovic-Housley, Z., Miglierini, G., Soldatova, L., Rizkallah, P. J., Muller, U., and Schirmer, T. (2000) Structure 8, 1025-1035
66. Beisel, H. G., Kawabata, S., Iwanaga, S., Huber, R., and Bode, W. (1999) EMBO J. 18, 2313-2322
67. Christner, J. E., Brown, M. L., and Dziewiatkowski, D. D. (1979) J. Biol. Chem. 254, 12303-12305
68. Parkar, A. A., and Day, A. J. (1997) FEBS Lett. 410, 413-417
69. Mahoney, D. J., Whittle, J. D., Milner, C. M., Clark, S. J., Mulloy, B., Buttle, D. J., Jones, G. C., Day, A. J., and Short, R. D. (2004) Anal. Biochem. 330, 123-129
70. Brocchieri, L., and Karlin, S. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 9297-9301