-
1
-
-
0024475207
-
High abundance of viruses found in aquatic environments
-
O. Bergh, K.Y. Borsheim, G. Bratbak, and M. Heldal High abundance of viruses found in aquatic environments Nature 340 1989 467 468
-
(1989)
Nature
, vol.340
, pp. 467-468
-
-
Bergh, O.1
Borsheim, K.Y.2
Bratbak, G.3
Heldal, M.4
-
2
-
-
0025198355
-
Viral mortality of marine bacteria and cyanobacteria
-
L.M. Proctor, and J.A. Fuhrman Viral mortality of marine bacteria and cyanobacteria Nature 343 1990 60 62
-
(1990)
Nature
, vol.343
, pp. 60-62
-
-
Proctor, L.M.1
Fuhrman, J.A.2
-
3
-
-
0025197488
-
Infection of phytoplankton by viruses and reduction of primary productivity
-
C.A. Suttle, A.M. Chan, and M.T. Cottrell Infection of phytoplankton by viruses and reduction of primary productivity Nature 347 1990 467 469
-
(1990)
Nature
, vol.347
, pp. 467-469
-
-
Suttle, C.A.1
Chan, A.M.2
Cottrell, M.T.3
-
4
-
-
0032858844
-
Viruses and nutrient cycles in the sea
-
S.W. Wilhelm, and C.A. Suttle Viruses and nutrient cycles in the sea Bioscience 49 1999 781 788
-
(1999)
Bioscience
, vol.49
, pp. 781-788
-
-
Wilhelm, S.W.1
Suttle, C.A.2
-
5
-
-
0000097970
-
The significance of viruses to mortality in aquatic microbial communities
-
C.A. Suttle The significance of viruses to mortality in aquatic microbial communities Microb Ecol 28 1994 237 243
-
(1994)
Microb Ecol
, vol.28
, pp. 237-243
-
-
Suttle, C.A.1
-
8
-
-
0030898290
-
Advances in the study of marine viruses
-
L.M. Proctor Advances in the study of marine viruses Microsc Res Tech 37 1997 136 161
-
(1997)
Microsc Res Tech
, vol.37
, pp. 136-161
-
-
Proctor, L.M.1
-
9
-
-
0033542481
-
Marine viruses and their biogeochemical and ecological effects
-
J.A. Fuhrman Marine viruses and their biogeochemical and ecological effects Nature 399 1999 541 548
-
(1999)
Nature
, vol.399
, pp. 541-548
-
-
Fuhrman, J.A.1
-
10
-
-
0034053843
-
Virioplankton: Viruses in aquatic ecosystems
-
K.E. Wommack, and R.R. Colwell Virioplankton: viruses in aquatic ecosystems Microbiol Mol Biol Rev 64 2000 69 114
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 69-114
-
-
Wommack, K.E.1
Colwell, R.R.2
-
11
-
-
1942486000
-
Ecology of prokaryotic viruses
-
M.G. Weinbauer Ecology of prokaryotic viruses FEMS Microbiol Rev 28 2004 127 181
-
(2004)
FEMS Microbiol Rev
, vol.28
, pp. 127-181
-
-
Weinbauer, M.G.1
-
12
-
-
0842266354
-
Are viruses driving microbial diversification and diversity?
-
M.G. Weinbauer, and F. Rassoulzadegan Are viruses driving microbial diversification and diversity? Environ Microbiol 6 2004 1 11
-
(2004)
Environ Microbiol
, vol.6
, pp. 1-11
-
-
Weinbauer, M.G.1
Rassoulzadegan, F.2
-
13
-
-
0026613365
-
The early evolution of eukaryotes - A geological perspective
-
A.H. Knoll The early evolution of eukaryotes - a geological perspective Science 256 1992 622 627
-
(1992)
Science
, vol.256
, pp. 622-627
-
-
Knoll, A.H.1
-
14
-
-
0018342323
-
Evidence by electron micrographs for a high incidence of bacteriophage particles in the waters of Yaquina Bay, Oregon: Ecological and taxonomical implications
-
F. Torrella, and R.Y. Morita Evidence by electron micrographs for a high incidence of bacteriophage particles in the waters of Yaquina Bay, Oregon: ecological and taxonomical implications Appl Environ Microbiol 37 1979 774 778
-
(1979)
Appl Environ Microbiol
, vol.37
, pp. 774-778
-
-
Torrella, F.1
Morita, R.Y.2
-
15
-
-
0027338848
-
Native marine bacteriophages
-
K.Y. Børsheim Native marine bacteriophages FEMS Microbiol Lett 102 1993 141 159
-
(1993)
FEMS Microbiol Lett
, vol.102
, pp. 141-159
-
-
Børsheim, K.Y.1
-
16
-
-
0027802137
-
Marine cyanophages infecting oceanic and coastal strains of Synechococcus: Abundance, morphology, cross-infectivity and growth characteristics
-
C.A. Suttle, and A.M. Chan Marine cyanophages infecting oceanic and coastal strains of Synechococcus: abundance, morphology, cross-infectivity and growth characteristics Mar Ecol Prog Ser 92 1993 99 109
-
(1993)
Mar Ecol Prog Ser
, vol.92
, pp. 99-109
-
-
Suttle, C.A.1
Chan, A.M.2
-
17
-
-
0027329223
-
Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
-
J.B. Waterbury, and F.W. Valois Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater Appl Environ Microbiol 59 1993 3393 3399
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 3393-3399
-
-
Waterbury, J.B.1
Valois, F.W.2
-
19
-
-
0032959665
-
Population dynamics of Chesapeake Bay virioplankton: Total community analysis using pulsed field gel electrophoresis
-
K.E. Wommack, J. Ravel, R.T. Hill, J. Chun, and R.R. Colwell Population dynamics of Chesapeake Bay virioplankton: total community analysis using pulsed field gel electrophoresis Appl Environ Microbiol 65 1999 231 240
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 231-240
-
-
Wommack, K.E.1
Ravel, J.2
Hill, R.T.3
Chun, J.4
Colwell, R.R.5
-
20
-
-
0034517760
-
Genome size distributions indicate variability and similarities among marine viral assemblages from diverse environments
-
G.F. Steward, J.L. Montiel, and F. Azam Genome size distributions indicate variability and similarities among marine viral assemblages from diverse environments Limnol Oceanogr 45 2000 1697 1706
-
(2000)
Limnol Oceanogr
, vol.45
, pp. 1697-1706
-
-
Steward, G.F.1
Montiel, J.L.2
Azam, F.3
-
21
-
-
1642465020
-
Abundance, distribution, and diversity of viruses in alkaline, hypersaline Mono Lake, California
-
S. Jiang, G. Steward, R. Jellison, W. Chu, and S. Choi Abundance, distribution, and diversity of viruses in alkaline, hypersaline Mono Lake, California Microb Ecol 47 2004 9 17
-
(2004)
Microb Ecol
, vol.47
, pp. 9-17
-
-
Jiang, S.1
Steward, G.2
Jellison, R.3
Chu, W.4
Choi, S.5
-
22
-
-
0035909533
-
Population dynamics and diversity of phytoplankton, bacteria and viruses in a seawater enclosure
-
A. Larsen, T. Castberg, R.A. Sandaa, C.P.D. Brussaard, J. Egge, M. Heldal, A. Paulino, R. Thyrhaug, E.J. Van Hannen, and G. Bratbak Population dynamics and diversity of phytoplankton, bacteria and viruses in a seawater enclosure Mar Ecol Prog Ser 221 2001 47 57
-
(2001)
Mar Ecol Prog Ser
, vol.221
, pp. 47-57
-
-
Larsen, A.1
Castberg, T.2
Sandaa, R.A.3
Brussaard, C.P.D.4
Egge, J.5
Heldal, M.6
Paulino, A.7
Thyrhaug, R.8
Van Hannen, E.J.9
Bratbak, G.10
-
23
-
-
0033133475
-
Use of the polymerase chain reaction and denaturing gradient gel electrophoresis to study diversity in natural virus communities
-
S.M. Short, and C.A. Suttle Use of the polymerase chain reaction and denaturing gradient gel electrophoresis to study diversity in natural virus communities Hydrobiologia 401 1999 19 32
-
(1999)
Hydrobiologia
, vol.401
, pp. 19-32
-
-
Short, S.M.1
Suttle, C.A.2
-
24
-
-
0035949626
-
A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2
-
E. Hambly, F. Tetart, C. Desplats, W.H. Wilson, H.M. Krisch, and N.H. Mann A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2 Proc Natl Acad Sci USA 98 2001 11411 11416
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 11411-11416
-
-
Hambly, E.1
Tetart, F.2
Desplats, C.3
Wilson, W.H.4
Krisch, H.M.5
Mann, N.H.6
-
25
-
-
0001571054
-
Analysis of cyanophage diversity and population structure in a south-north transect of the Atlantic Ocean
-
W.H. Wilson, N.J. Fuller, I.R. Joint, and N.H. Mann Analysis of cyanophage diversity and population structure in a south-north transect of the Atlantic Ocean Bull Inst Oceanogr (Monaco) 19 1999 209 216
-
(1999)
Bull Inst Oceanogr (Monaco)
, vol.19
, pp. 209-216
-
-
Wilson, W.H.1
Fuller, N.J.2
Joint, I.R.3
Mann, N.H.4
-
26
-
-
0346816537
-
The physical environment affects cyanophage communities in British Columbia inlets
-
C.M. Frederickson, S.M. Short, and C.A. Suttle The physical environment affects cyanophage communities in British Columbia inlets Microb Ecol 46 2003 348 357 This study demonstrates that phage communities separated by a few meters in the ocean are genetically distinct.
-
(2003)
Microb Ecol
, vol.46
, pp. 348-357
-
-
Frederickson, C.M.1
Short, S.M.2
Suttle, C.A.3
-
27
-
-
12244252269
-
Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments
-
C.M. Short, and C.A. Suttle Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments Appl Environ Microbiol 71 2005 480 486 This study reports that indistinguishable phage structural gene (g20) sequences can be found in widely differing environments, including the Southern Ocean, Gulf of Mexico, melt-water ponds on an Arctic ice shelf and a lake in Germany. This implies that viral genes are circulating relatively rapidly through the entire viriosphere.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 480-486
-
-
Short, C.M.1
Suttle, C.A.2
-
28
-
-
0036211846
-
Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene G20
-
Y. Zhong, F. Chen, S.W. Wilhelm, L. Poorvin, and R.E. Hodson Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene G20 Appl Environ Microbiol 68 2002 1576 1584
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 1576-1584
-
-
Zhong, Y.1
Chen, F.2
Wilhelm, S.W.3
Poorvin, L.4
Hodson, R.E.5
-
29
-
-
2342472596
-
Cyanophage diversity, inferred from G20 gene analyses, in the largest natural lake in France, Lake Bourget
-
U. Dorigo, S. Jacquet, and J.F. Humbert Cyanophage diversity, inferred from G20 gene analyses, in the largest natural lake in France, Lake Bourget Appl Environ Microbiol 70 2004 1017 1022
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1017-1022
-
-
Dorigo, U.1
Jacquet, S.2
Humbert, J.F.3
-
30
-
-
0043031198
-
Genetic diversity and temporal variation in the cyanophage community infecting marine Synechococcus species in Rhode Island's coastal waters
-
M.F. Marston, and J.L. Sallee Genetic diversity and temporal variation in the cyanophage community infecting marine Synechococcus species in Rhode Island's coastal waters Appl Environ Microbiol 69 2003 4639 4647
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 4639-4647
-
-
Marston, M.F.1
Sallee, J.L.2
-
31
-
-
0036197501
-
Sequence analysis of marine virus communities reveals that groups of related algal viruses are widely distributed in nature
-
S.M. Short, and C.A. Suttle Sequence analysis of marine virus communities reveals that groups of related algal viruses are widely distributed in nature Appl Environ Microbiol 68 2002 1290 1296
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 1290-1296
-
-
Short, S.M.1
Suttle, C.A.2
-
32
-
-
3142570537
-
Global distribution of nearly identical phage-encoded DNA sequences
-
M. Breitbart, J.H. Miyake, and F. Rohwer Global distribution of nearly identical phage-encoded DNA sequences FEMS Microbiol Lett 236 2004 249 256 These authors report that genetically indistinguishable polymerase sequences from phage occur in environments as diverse as freshwater, seawater and marine sediments, and therefore must be highly mobile among different environments.
-
(2004)
FEMS Microbiol Lett
, vol.236
, pp. 249-256
-
-
Breitbart, M.1
Miyake, J.H.2
Rohwer, F.3
-
33
-
-
0041736065
-
Marine ecosystems: Bacterial photosynthesis genes in a virus
-
N.H. Mann, A. Cook, A. Millard, S. Bailey, and M. Clokie Marine ecosystems: bacterial photosynthesis genes in a virus Nature 424 2003 741 A brief report of the observation of genes coding for key photosystem proteins in a cyanophage that infects Synechococcus, and some of the environmental implications.
-
(2003)
Nature
, vol.424
, pp. 741
-
-
Mann, N.H.1
Cook, A.2
Millard, A.3
Bailey, S.4
Clokie, M.5
-
34
-
-
6344288922
-
Cyanophage infection and photoinhibition in marine cyanobacteria
-
S. Bailey, M.R.J. Clokie, A. Millard, and N.H. Mann Cyanophage infection and photoinhibition in marine cyanobacteria Res Microbiol 155 2004 720 725 A review of the role of certain photosystem proteins in photosynthesis in Synechococcus, and the potential role of phage encoded versions of the genes.
-
(2004)
Res Microbiol
, vol.155
, pp. 720-725
-
-
Bailey, S.1
Clokie, M.R.J.2
Millard, A.3
Mann, N.H.4
-
35
-
-
3342929288
-
Genetic organization of the psbAD region in phages infecting marine Synechococcus strains
-
A. Millard, M.R.J. Clokie, D.A. Shub, and N.H. Mann Genetic organization of the psbAD region in phages infecting marine Synechococcus strains Proc Natl Acad Sci USA 101 2004 11007 11012 This paper reports a thorough study of the genetic arrangement of psbA and psbD sequences in cyanophages that infect Synechococcus. The differences of arrangement in phages compared to their hosts, as well as an intron observed in two cyanophage psbA sequences are discussed. The authors also consider the implied horizontal gene transfer between hosts and phages, and the evolutionary consequences.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 11007-11012
-
-
Millard, A.1
Clokie, M.R.J.2
Shub, D.A.3
Mann, N.H.4
-
36
-
-
3342915398
-
Transfer of photosynthesis genes to and from Prochlorococcus viruses
-
D. Lindell, M.B. Sullivan, Z.I. Johnson, A.C. Tolonen, F. Rohwer, and S.W. Chisholm Transfer of photosynthesis genes to and from Prochlorococcus viruses Proc Natl Acad Sci USA 101 2004 11013 11018 This paper comprises an extensive study of a range of photosynthesis related genes observed in cyanophages that infect Prochlorococcus, including phylogenetic relationships and divergence analyses. The presence of these genes, their potential roles and environmental relevance, as well as the relative divergence in phages compared to hosts, are considered in some depth.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 11013-11018
-
-
Lindell, D.1
Sullivan, M.B.2
Johnson, Z.I.3
Tolonen, A.C.4
Rohwer, F.5
Chisholm, S.W.6
-
37
-
-
0037346852
-
Molecular diversity among marine picophytoplankton as revealed by psbA analyses
-
G. Zeidner, C.M. Preston, E.F. Delong, R. Massana, A.F. Post, D.J. Scanlan, and O. Beja Molecular diversity among marine picophytoplankton as revealed by psbA analyses Environ Microbiol 5 2003 212 216 A polymerase chain reaction (PCR)-based study of psbA sequences of picophytoplankton, and their phylogenetic relationships, in the marine environment.
-
(2003)
Environ Microbiol
, vol.5
, pp. 212-216
-
-
Zeidner, G.1
Preston, C.M.2
Delong, E.F.3
Massana, R.4
Post, A.F.5
Scanlan, D.J.6
Beja, O.7
-
38
-
-
1942539920
-
The use of DGGE analyses to explore Eastern Mediterranean and Red Sea marine picophytoplankton assemblages
-
G. Zeidner, and O. Beja The use of DGGE analyses to explore Eastern Mediterranean and Red Sea marine picophytoplankton assemblages Environ Microbiol 6 2004 528 534 A PCR/denaturing gradient gel electrophoresis-based study of psbA sequences from environmental samples, and of the phylogenetic relationships between picophytoplankton and sequences of unknown origin, in the marine environment.
-
(2004)
Environ Microbiol
, vol.6
, pp. 528-534
-
-
Zeidner, G.1
Beja, O.2
-
39
-
-
22544481110
-
Potential photosynthesis gene swapping between Prochlorococcus and Synechococcus via viral intermediates
-
in press.
-
Zeidner G, Bielawski JP, Shmoish M, Scanlan DJ, Sabehi G, Béja O: Potential photosynthesis gene swapping between Prochlorococcus and Synechococcus via viral intermediates. Environ Microbiol 2005, in press. This paper reports observations of the evolutionary relationships of psbA sequences between Synechococcus and phages that infect it. The genetic organization, GC content, and results of recombination tests are discussed.
-
(2005)
Environ Microbiol
-
-
Zeidner, G.1
Bielawski, J.P.2
Shmoish, M.3
Scanlan, D.J.4
Sabehi, G.5
Béja, O.6
-
40
-
-
0041375471
-
Cyanophages infecting the oceanic cyanobacterium Prochlorococcus
-
M.B. Sullivan, J.B. Waterbury, and S.W. Chisholm Cyanophages infecting the oceanic cyanobacterium Prochlorococcus Nature 424 2003 1047 1051
-
(2003)
Nature
, vol.424
, pp. 1047-1051
-
-
Sullivan, M.B.1
Waterbury, J.B.2
Chisholm, S.W.3
-
41
-
-
0037195156
-
Genomic analysis of uncultured marine viral communities
-
M. Breitbart, P. Salamon, B. Andresen, J.M. Mahaffy, A.M. Segall, D. Mead, F. Azam, and F. Rohwer Genomic analysis of uncultured marine viral communities Proc Natl Acad Sci USA 99 2002 14250 14255
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 14250-14255
-
-
Breitbart, M.1
Salamon, P.2
Andresen, B.3
Mahaffy, J.M.4
Segall, A.M.5
Mead, D.6
Azam, F.7
Rohwer, F.8
-
42
-
-
1642363900
-
Diversity and population structure of a near-shore marine-sediment viral community
-
M. Breitbart, B. Felts, S. Kelley, J.M. Mahaffy, J. Nulton, P. Salamon, and F. Rohwer Diversity and population structure of a near-shore marine-sediment viral community Proc Biol Sci 271 2004 565 574 This is the first study to use a metagenomic approach to assess the genetic diversity of viruses in sediment samples. The auhors demonstrate that marine sediments contain an even more genetically diverse and uncharacterized viral community than in seawater.
-
(2004)
Proc Biol Sci
, vol.271
, pp. 565-574
-
-
Breitbart, M.1
Felts, B.2
Kelley, S.3
Mahaffy, J.M.4
Nulton, J.5
Salamon, P.6
Rohwer, F.7
-
43
-
-
19144363310
-
PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information
-
F. Angly, B. Rodriguez-Brito, D. Bangor, P. Mcnairnie, M. Breitbart, P. Salamon, B. Felts, J. Nulton, J. Mahaffy, and F. Rohwer PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information BMC Bioinformatics 6 2005 41
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 41
-
-
Angly, F.1
Rodriguez-Brito, B.2
Bangor, D.3
McNairnie, P.4
Breitbart, M.5
Salamon, P.6
Felts, B.7
Nulton, J.8
Mahaffy, J.9
Rohwer, F.10
-
44
-
-
0347364646
-
Genome evolution reveals biochemical networks and functional modules
-
C. von Mering, E.M. Zdobnov, S. Tsoka, F.D. Ciccarelli, J.B. Pereira-Leal, C.A. Ouzounis, and P. Bork Genome evolution reveals biochemical networks and functional modules Proc Natl Acad Sci USA 100 2003 15428 15433
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 15428-15433
-
-
Von Mering, C.1
Zdobnov, E.M.2
Tsoka, S.3
Ciccarelli, F.D.4
Pereira-Leal, J.B.5
Ouzounis, C.A.6
Bork, P.7
-
45
-
-
20144389217
-
Genetic diversity of marine Synechococcus and co-occurring cyanophage communities: Evidence for viral control of phytoplankton
-
M. Muhling, N.J. Fuller, A. Millard, P.J. Somerfield, D. Marie, W.H. Wilson, D.J. Scanlan, A.F. Post, I. Joint, and N.H. Mann Genetic diversity of marine Synechococcus and co-occurring cyanophage communities: evidence for viral control of phytoplankton Environ Microbiol 7 2005 499 508
-
(2005)
Environ Microbiol
, vol.7
, pp. 499-508
-
-
Muhling, M.1
Fuller, N.J.2
Millard, A.3
Somerfield, P.J.4
Marie, D.5
Wilson, W.H.6
Scanlan, D.J.7
Post, A.F.8
Joint, I.9
Mann, N.H.10
-
46
-
-
22544484758
-
A persistent, productive and seasonally dynamic vibriophage population within Pacific Oysters (Crassostrea gigas)
-
in press.
-
Comeau AM, Buenaventura E, Suttle CA: A persistent, productive and seasonally dynamic vibriophage population within Pacific Oysters (Crassostrea gigas). Appl Environ Microbiol 2005, in press.
-
(2005)
Appl Environ Microbiol
-
-
Comeau, A.M.1
Buenaventura, E.2
Suttle, C.A.3
-
47
-
-
21344461027
-
Three Prochlorococcus cyanophage genomes: Signature features and ecological interpretations
-
M.B. Sullivan, M.L. Coleman, P. Weigele, F. Rohwer, and S.W. Chisholm Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations PLoS Biol 3 2005 e144
-
(2005)
PLoS Biol
, vol.3
, pp. 144
-
-
Sullivan, M.B.1
Coleman, M.L.2
Weigele, P.3
Rohwer, F.4
Chisholm, S.W.5
|