-
1
-
-
0034602846
-
Discrimination between SRP- and SecA/SecB-dependent substrates involves selective recognition of nascent chains by SRP and trigger factor
-
Beck, K., L.F. Wu, J. Brunner, and M. Müller. 2000. Discrimination between SRP- and SecA/SecB-dependent substrates involves selective recognition of nascent chains by SRP and trigger factor. EMBO J. 19:134-143.
-
(2000)
EMBO J.
, vol.19
, pp. 134-143
-
-
Beck, K.1
Wu, L.F.2
Brunner, J.3
Müller, M.4
-
2
-
-
0037407668
-
Structural insight into the role of the ribosomal tunnel in cellular regulation
-
Berisio, R., F. Schluenzen, J. Harms, A. Bashan, T. Auerbach, D. Baram, and A. Yonath. 2003. Structural insight into the role of the ribosomal tunnel in cellular regulation. Nat. Struct. Biol. 10:366-370.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 366-370
-
-
Berisio, R.1
Schluenzen, F.2
Harms, J.3
Bashan, A.4
Auerbach, T.5
Baram, D.6
Yonath, A.7
-
3
-
-
0035078316
-
Physiological basis for conservation of the signal recognition particle targeting pathway in Escherichia coli
-
Bernstein, H.D., and J.B. Hyndman. 2001. Physiological basis for conservation of the signal recognition particle targeting pathway in Escherichia coli. J. Bacteriol. 183:2187-2197.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2187-2197
-
-
Bernstein, H.D.1
Hyndman, J.B.2
-
4
-
-
0032527774
-
Flexibility of the nascent polypeptide chain within the ribosome-contacts from the peptide N-terminus to a specific region of the 30S subunit
-
Choi, K.M., J.F. Atkins, R.F. Gesteland, and R. Brimacombe. 1998. Flexibility of the nascent polypeptide chain within the ribosome-contacts from the peptide N-terminus to a specific region of the 30S subunit. Eur. J. Biochem. 255:409-413.
-
(1998)
Eur. J. Biochem.
, vol.255
, pp. 409-413
-
-
Choi, K.M.1
Atkins, J.F.2
Gesteland, R.F.3
Brimacombe, R.4
-
5
-
-
0030590843
-
Assembly of a cytoplasmic membrane protein in Escherichia coli is dependent on the signal recognition particle
-
de Gier, J.-W.L., P. Mansournia, Q.A. Valent, G.J. Phillips, J. Luirink, and G. von Heijne. 1996. Assembly of a cytoplasmic membrane protein in Escherichia coli is dependent on the signal recognition particle. FEBS Lett. 399:307-309.
-
(1996)
FEBS Lett.
, vol.399
, pp. 307-309
-
-
De Gier, J.-W.L.1
Mansournia, P.2
Valent, Q.A.3
Phillips, G.J.4
Luirink, J.5
Von Heijne, G.6
-
6
-
-
0023187089
-
Optimal posttranslational translocation of the precursor of PhoE protein across Escherichia coli membrane vescicles requires both ATP and the proton motive force
-
de Vrije, T., J. Tommassen, and B. de Kruijff. 1987. Optimal posttranslational translocation of the precursor of PhoE protein across Escherichia coli membrane vescicles requires both ATP and the proton motive force. Biochim. Biophys. Acta. 900:63-72.
-
(1987)
Biochim. Biophys. Acta
, vol.900
, pp. 63-72
-
-
De Vrije, T.1
Tommassen, J.2
De Kruijff, B.3
-
7
-
-
4944246094
-
Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins
-
Ferbitz, L., T. Maier, H. Patzelt, B. Bukau, E. Deuerling, and N. Ban. 2004. Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins. Nature. 431:590-596.
-
(2004)
Nature
, vol.431
, pp. 590-596
-
-
Ferbitz, L.1
Maier, T.2
Patzelt, H.3
Bukau, B.4
Deuerling, E.5
Ban, N.6
-
8
-
-
0038719738
-
Signal recognition particle binds to ribosome-bound signal sequences with fluorescence-detected subnanomolar affinity that does not diminish as the nascent chain lengthens
-
Flanagan, J.J., J.C. Chen, Y. Miao, Y. Shao, J. Lin, P.E. Bock, and A.E. Johnson. 2003. Signal recognition particle binds to ribosome-bound signal sequences with fluorescence-detected subnanomolar affinity that does not diminish as the nascent chain lengthens. J. Biol. Chem. 278:18628-18637.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 18628-18637
-
-
Flanagan, J.J.1
Chen, J.C.2
Miao, Y.3
Shao, Y.4
Lin, J.5
Bock, P.E.6
Johnson, A.E.7
-
9
-
-
0034885664
-
The polypeptide tunnel system in the ribosome and its gating in erythromycin resistance mutants of L4 and L22
-
Gabashvili, I.S., S.T. Gregory, M. Valle, R. Grassucci, M. Worbs, M.C. Wahl, A.E. Dahlberg, and J. Frank. 2001. The polypeptide tunnel system in the ribosome and its gating in erythromycin resistance mutants of L4 and L22. Mol. Cell. 8:181-188.
-
(2001)
Mol. Cell.
, vol.8
, pp. 181-188
-
-
Gabashvili, I.S.1
Gregory, S.T.2
Valle, M.3
Grassucci, R.4
Worbs, M.5
Wahl, M.C.6
Dahlberg, A.E.7
Frank, J.8
-
10
-
-
1842766175
-
Three-dimensional structures of translating ribosomes by Cryo-EM
-
Gilbert, R.J., P. Fucini, S. Connell, S.D. Fuller, K.H. Nierhaus, C.V. Robinson, C.M. Dobson, and D.I. Stuart. 2004. Three-dimensional structures of translating ribosomes by Cryo-EM. Mol. Cell. 14:57-66.
-
(2004)
Mol. Cell.
, vol.14
, pp. 57-66
-
-
Gilbert, R.J.1
Fucini, P.2
Connell, S.3
Fuller, S.D.4
Nierhaus, K.H.5
Robinson, C.V.6
Dobson, C.M.7
Stuart, D.I.8
-
11
-
-
0037406142
-
The signal recognition particle binds to protein L23 at the peptide exit of the Escherichia coli ribosome
-
Gu, S.Q., F. Peske, H.J. Wieden, M.V. Rodnina, and W. Wintermeyer. 2003. The signal recognition particle binds to protein L23 at the peptide exit of the Escherichia coli ribosome. RNA. 9:566-573.
-
(2003)
RNA
, vol.9
, pp. 566-573
-
-
Gu, S.Q.1
Peske, F.2
Wieden, H.J.3
Rodnina, M.V.4
Wintermeyer, W.5
-
12
-
-
1542319100
-
Structure of the signal recognition particle interacting with the elongation-arrested ribosome
-
Halic, M., T. Becker, M.R. Pool, C.M. Spahn, R.A. Grassucci, J. Frank, and R. Beckmann. 2004. Structure of the signal recognition particle interacting with the elongation-arrested ribosome. Nature. 427:808-814.
-
(2004)
Nature
, vol.427
, pp. 808-814
-
-
Halic, M.1
Becker, T.2
Pool, M.R.3
Spahn, C.M.4
Grassucci, R.A.5
Frank, J.6
Beckmann, R.7
-
13
-
-
0035977093
-
High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
-
Harms, J., F. Schluenzen, R. Zarivach, A. Bashan, S. Gat, I. Agmon, H. Bartels, F. Franceschi, and A. Yonath. 2001. High resolution structure of the large ribosomal subunit from a mesophilic eubacterium. Cell. 107:679-688.
-
(2001)
Cell
, vol.107
, pp. 679-688
-
-
Harms, J.1
Schluenzen, F.2
Zarivach, R.3
Bashan, A.4
Gat, S.5
Agmon, I.6
Bartels, H.7
Franceschi, F.8
Yonath, A.9
-
14
-
-
0029913836
-
Escherichia coli trigger factor is a prolyl isomerase that associates with nascent polypeptide chains
-
Hesterkamp, T., S. Hauser, H. Lütcke, and B. Bukau. 1996. Escherichia coli trigger factor is a prolyl isomerase that associates with nascent polypeptide chains. Proc. Natl. Acad. Sci. USA. 93:4437-4441.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 4437-4441
-
-
Hesterkamp, T.1
Hauser, S.2
Lütcke, H.3
Bukau, B.4
-
15
-
-
0034617438
-
Nascent Lep inserts into the Escherichia coli inner membrane in the vicinity of YidC, SecY and SecA
-
Houben, E.N.G., P.A. Scotti, Q.A. Valent, J. Brunner, J.-W.L. de Gier, B. Oudega, and J. Luirink. 2000. Nascent Lep inserts into the Escherichia coli inner membrane in the vicinity of YidC, SecY and SecA. FEBS Lett. 476:229-233.
-
(2000)
FEBS Lett.
, vol.476
, pp. 229-233
-
-
Houben, E.N.G.1
Scotti, P.A.2
Valent, Q.A.3
Brunner, J.4
De Gier, J.-W.L.5
Oudega, B.6
Luirink, J.7
-
16
-
-
0037184082
-
YidC and SecY mediate membrane insertion of a Type I transmembrane domain
-
Houben, E.N.G., M.L. Urbanus, M. van der Laan, C.M. ten Hagen-Jongman, A.J. Driessen, J. Brunner, B. Oudega, and J. Luirink. 2002. YidC and SecY mediate membrane insertion of a Type I transmembrane domain. J. Biol. Chem. 277:35880-35886.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 35880-35886
-
-
Houben, E.N.G.1
Urbanus, M.L.2
Van Der Laan, M.3
Ten Hagen-Jongman, C.M.4
Driessen, A.J.5
Brunner, J.6
Oudega, B.7
Luirink, J.8
-
17
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T.A., J.Y. Zou, S.W. Cowan, and Kjeldgaard. 1991. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A. 47:110-119.
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard4
-
18
-
-
0038121152
-
Signal recognition particle-dependent protein targeting, universal to all kingdoms of life
-
Koch, H.G., M. Moser, and M. Müller. 2003. Signal recognition particle-dependent protein targeting, universal to all kingdoms of life. Rev. Physiol. Biochem. Pharmacol. 146:55-94.
-
(2003)
Rev. Physiol. Biochem. Pharmacol.
, vol.146
, pp. 55-94
-
-
Koch, H.G.1
Moser, M.2
Müller, M.3
-
19
-
-
0037068441
-
L23 protein functions as a chaperone docking site on the ribosome
-
Kramer, G., T. Rauch, W. Rist, S. Vorderwülbecke, H. Patzelt, A. Schulze-Specking, N. Ban, E. Deuerling, and B. Bukau. 2002. L23 protein functions as a chaperone docking site on the ribosome. Nature. 419:171-174.
-
(2002)
Nature
, vol.419
, pp. 171-174
-
-
Kramer, G.1
Rauch, T.2
Rist, W.3
Vorderwülbecke, S.4
Patzelt, H.5
Schulze-Specking, A.6
Ban, N.7
Deuerling, E.8
Bukau, B.9
-
20
-
-
0024790857
-
SecB protein stabilizes a translocation-competent state of purified prePhoE protein
-
Kusters, R., T. de Vrije, E. Breukink, and B. de Kruijff. 1989. SecB protein stabilizes a translocation-competent state of purified prePhoE protein. J. Biol. Chem. 264:20827-20830.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 20827-20830
-
-
Kusters, R.1
De Vrije, T.2
Breukink, E.3
De Kruijff, B.4
-
21
-
-
0031030059
-
Discrete cross-linking products identified during membrane protein biosynthesis
-
Laird, V., and S. High. 1997. Discrete cross-linking products identified during membrane protein biosynthesis. J. Biol. Chem. 272:1983-1989.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 1983-1989
-
-
Laird, V.1
High, S.2
-
22
-
-
0026516666
-
Distinct domains of an oligotopic membrane protein are Sec-dependent and Sec-independent for membrane insertion
-
Lee, J.I., A. Kuhn, and R.E. Dalbey. 1992. Distinct domains of an oligotopic membrane protein are Sec-dependent and Sec-independent for membrane insertion. J. Biol. Chem. 267:938-943.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 938-943
-
-
Lee, J.I.1
Kuhn, A.2
Dalbey, R.E.3
-
23
-
-
0031471055
-
Both lumenal and cytosolic gating of the aqueous ER translocon pore are regulated from inside the ribosome during membrane protein integration
-
Liao, S., J. Lin, H. Do, and A.E. Johnson. 1997. Both lumenal and cytosolic gating of the aqueous ER translocon pore are regulated from inside the ribosome during membrane protein integration. Cell. 90:31-41.
-
(1997)
Cell
, vol.90
, pp. 31-41
-
-
Liao, S.1
Lin, J.2
Do, H.3
Johnson, A.E.4
-
24
-
-
0035854694
-
YidC/Oxa1p/Alb3: Evolutionarily conserved mediators of membrane protein assembly
-
Luirink, J., T. Samuelsson, and J.W. de Gier. 2001. YidC/Oxa1p/Alb3: evolutionarily conserved mediators of membrane protein assembly. FEBS Lett. 501:1-5.
-
(2001)
FEBS Lett.
, vol.501
, pp. 1-5
-
-
Luirink, J.1
Samuelsson, T.2
De Gier, J.W.3
-
25
-
-
0032488845
-
Protein translocation: Tunnel vision
-
Matlack, K.E.S., W. Mothes, and T.A. Rapoport. 1998. Protein translocation: tunnel vision. Cell. 92:381-390.
-
(1998)
Cell
, vol.92
, pp. 381-390
-
-
Matlack, K.E.S.1
Mothes, W.2
Rapoport, T.A.3
-
26
-
-
0012249596
-
Different conformations of nascent polypeptides during translocation across the ER membrane
-
10.1186/1471-2121-1-3
-
Mingarro, I., I. Nilsson, P. Whitley, and G. von Heijne. 2000. Different conformations of nascent polypeptides during translocation across the ER membrane. BMC Cell Biol. 1:10.1186/1471-2121-1-3.
-
(2000)
BMC Cell Biol.
, vol.1
-
-
Mingarro, I.1
Nilsson, I.2
Whitley, P.3
Von Heijne, G.4
-
27
-
-
0037040411
-
The ribosomal exit tunnel functions as a discriminating gate
-
Nakatogawa, H., and K. Ito. 2002. The ribosomal exit tunnel functions as a discriminating gate. Cell. 108:629-636.
-
(2002)
Cell
, vol.108
, pp. 629-636
-
-
Nakatogawa, H.1
Ito, K.2
-
28
-
-
0034637161
-
The structural basis of ribosome activity in peptide bond synthesis
-
Nissen, P., J. Hansen, N. Ban, P.B. Moore, and T.A. Steitz. 2000. The structural basis of ribosome activity in peptide bond synthesis. Science. 289:920-930.
-
(2000)
Science
, vol.289
, pp. 920-930
-
-
Nissen, P.1
Hansen, J.2
Ban, N.3
Moore, P.B.4
Steitz, T.A.5
-
29
-
-
0037162838
-
Distinct modes of signal recognition particle interaction with the ribosome
-
Pool, M.R., J. Stumm, T.A. Fulga, I. Sinning, and B. Dobberstein. 2002. Distinct modes of signal recognition particle interaction with the ribosome. Science. 297:1345-1348.
-
(2002)
Science
, vol.297
, pp. 1345-1348
-
-
Pool, M.R.1
Stumm, J.2
Fulga, T.A.3
Sinning, I.4
Dobberstein, B.5
-
30
-
-
0141990786
-
Targeting and insertion of heterologous membrane proteins in E. coli
-
Raine, A., R. Ullers, M. Pavlov, J. Luirink, J.E. Wikberg, and M. Ehrenberg. 2003. Targeting and insertion of heterologous membrane proteins in E. coli. Biochimie. 85:659-668.
-
(2003)
Biochimie
, vol.85
, pp. 659-668
-
-
Raine, A.1
Ullers, R.2
Pavlov, M.3
Luirink, J.4
Wikberg, J.E.5
Ehrenberg, M.6
-
31
-
-
0034632819
-
YidC mediates membrane protein insertion in bacteria
-
Samuelson, J.C., M. Chen, F. Jiang, I. Möller, M. Wiedmann, A. Kuhn, G.J. Phillips, and R.E. Dalbey. 2000. YidC mediates membrane protein insertion in bacteria. Nature. 406:637-641.
-
(2000)
Nature
, vol.406
, pp. 637-641
-
-
Samuelson, J.C.1
Chen, M.2
Jiang, F.3
Möller, I.4
Wiedmann, M.5
Kuhn, A.6
Phillips, G.J.7
Dalbey, R.E.8
-
32
-
-
0034651753
-
YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase
-
Scotti, P.A., M.L. Urbanus, J. Brunner, J.-W.L. de Gier, G. von Heijne, C. van der Does, A.J.M. Driessen, B. Oudega, and J. Luirink. 2000. YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase. EMBO J. 19:542-549.
-
(2000)
EMBO J.
, vol.19
, pp. 542-549
-
-
Scotti, P.A.1
Urbanus, M.L.2
Brunner, J.3
De Gier, J.-W.L.4
Von Heijne, G.5
Van Der Does, C.6
Driessen, A.J.M.7
Oudega, B.8
Luirink, J.9
-
33
-
-
0037040406
-
Regulatory nascent peptides in the ribosomal tunnel
-
Tenson, T., and M. Ehrenberg. 2002. Regulatory nascent peptides in the ribosomal tunnel. Cell. 108:591-594.
-
(2002)
Cell
, vol.108
, pp. 591-594
-
-
Tenson, T.1
Ehrenberg, M.2
-
34
-
-
0032525163
-
Different conformations of nascent peptides on ribosomes
-
Tsalkova, T., O.W. Odom, G. Kramer, and B. Hardesty. 1998. Different conformations of nascent peptides on ribosomes. J. Mol. Biol. 278:713-723.
-
(1998)
J. Mol. Biol.
, vol.278
, pp. 713-723
-
-
Tsalkova, T.1
Odom, O.W.2
Kramer, G.3
Hardesty, B.4
-
35
-
-
0038360877
-
Interplay of signal recognition particle and trigger factor at L23 near the nascent chain exit site on the Escherichia coli ribosome
-
Ullers, R.S., E.N.G. Houben, A. Raine, C.M. Ten Hagen-Jongman, M. Ehrenberg, J. Brunner, B. Oudega, N. Harms, and J. Luirink. 2003. Interplay of signal recognition particle and trigger factor at L23 near the nascent chain exit site on the Escherichia coli ribosome. J. Cell Biol. 161:679-684.
-
(2003)
J. Cell Biol.
, vol.161
, pp. 679-684
-
-
Ullers, R.S.1
Houben, E.N.G.2
Raine, A.3
Ten Hagen-Jongman, C.M.4
Ehrenberg, M.5
Brunner, J.6
Oudega, B.7
Harms, N.8
Luirink, J.9
-
36
-
-
2442707856
-
SecB is a bona fide generalized chaperone in Escherichia coli
-
Ullers, R.S., J. Luirink, N. Harms, F. Schwager, C. Georgopoulos, and P. Genevaux. 2004. SecB is a bona fide generalized chaperone in Escherichia coli. Proc. Natl. Acad. Sci. USA. 101:7583-7588.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 7583-7588
-
-
Ullers, R.S.1
Luirink, J.2
Harms, N.3
Schwager, F.4
Georgopoulos, C.5
Genevaux, P.6
-
37
-
-
0034958117
-
Sec-dependent membrane protein insertion: Sequential interaction of nascent FtsQ with SecY and YidC
-
Urbanus, M.L., P.A. Scotti, L. Fröderberg, A. Sääf, J.-W.L. de Gier, J. Brunner, J.C. Samuelson, R.E. Dalbey, B. Oudega, and J. Luirink. 2001. Sec-dependent membrane protein insertion: sequential interaction of nascent FtsQ with SecY and YidC. EMBO Rep. 2:524-529.
-
(2001)
EMBO Rep.
, vol.2
, pp. 524-529
-
-
Urbanus, M.L.1
Scotti, P.A.2
Fröderberg, L.3
Sääf, A.4
De Gier, J.-W.L.5
Brunner, J.6
Samuelson, J.C.7
Dalbey, R.E.8
Oudega, B.9
Luirink, J.10
-
38
-
-
0028799459
-
Early events in preprotein recognition in E. coli: Interaction of SRP and trigger factor with nascent polypeptides
-
Valent, Q.A., D.A. Kendall, S. High, R. Kusters, B. Oudega, and J. Luirink. 1995. Early events in preprotein recognition in E. coli: interaction of SRP and trigger factor with nascent polypeptides. EMBO J. 14:5494-5505.
-
(1995)
EMBO J.
, vol.14
, pp. 5494-5505
-
-
Valent, Q.A.1
Kendall, D.A.2
High, S.3
Kusters, R.4
Oudega, B.5
Luirink, J.6
-
39
-
-
0029112391
-
NAC covers ribosome-associated nascent chains thereby forming a protective environment for regions of nascent chains just emerging from the peptidyl transferase center
-
Wang, S., H. Sakai, and M. Wiedmann. 1995. NAC covers ribosome-associated nascent chains thereby forming a protective environment for regions of nascent chains just emerging from the peptidyl transferase center. J. Cell Biol. 130:519-528.
-
(1995)
J. Cell Biol.
, vol.130
, pp. 519-528
-
-
Wang, S.1
Sakai, H.2
Wiedmann, M.3
-
40
-
-
1542358892
-
Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins
-
Woolhead, C.A., P.J. McCormick, and A.E. Johnson. 2004. Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins. Cell. 116:725-736.
-
(2004)
Cell
, vol.116
, pp. 725-736
-
-
Woolhead, C.A.1
McCormick, P.J.2
Johnson, A.E.3
|