An Exo-β-1,3-galactanase having a novel β-1,3-galactan-binding module from Phanerochaete chrysosporium

Journal of Biological Chemistry

Volumn 280, Issue 27, 2005, Pages 25820-25829

  Ichinose, Hitomi ^a   Yoshida, Makoto ^b   Kotake, Toshihisa ^c   Kuno, Atsushi ^d   Igarashi, Kiyohiko ^b   Tsumuraya, Yoichi ^c   Samejima, Masahiro ^b   Hirabayashi, Jun ^d   Kobayashi, Hideyuki ^a   Kaneko, Satoshi ^a  

^a NATIONAL FOOD RESEARCH INSTITUTE   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

^c SAITAMA UNIVERSITY   (Japan)

^d NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BACTERIA; CARBOHYDRATES; ELECTROPHORESIS; GENES; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HYDROLYSIS; OLIGOMERS; POLYMERIZATION;

BINDING AFFINITY; CATALYTIC MODULES; MOLECULAR MASS; POLYSACCHARIDE;

ENZYMES;

ARABINOGALACTAN; BETA 1,3 GALACTAN; BETA 1,3 GALACTANASE; BETA 1,3 GALACTOBIOSE; CELLULOSE; ENZYME; GALACTAN; GALACTOSE; GLYCOSIDASE; OLIGOSACCHARIDE; POLYSACCHARIDE; UNCLASSIFIED DRUG; XYLAN;

AFFINITY CHROMATOGRAPHY; AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; CATALYSIS; CBM6 GENE; ELECTROPHORESIS; ENZYME MECHANISM; GENE; GENE EXPRESSION; GENE SEQUENCE; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HYDROLYSIS; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHANEROCHAETE; PICHIA PASTORIS; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERIZATION; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; BASE SEQUENCE; FUNGAL PROTEINS; GALACTANS; GLYCOSIDE HYDROLASES; MOLECULAR SEQUENCE DATA; PHANEROCHAETE; PICHIA; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; SUBSTRATE SPECIFICITY;

ACACIA SENEGAL; LARIX; PHANEROCHAETE CHRYSOSPORIUM; PICHIA PASTORIS;

EID: 21844480904     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M501024200     Document Type: Article

References (32)

1. Knox, J. P. (1995) FASEB J. 9, 1004-1012
2. Du, H., Clarke, A. E., and Bacic, A. (1996) Trends Cell Biol. 6, 411-414
3. Smallwood, M., Knox, J. P., and Bowles, D. J. (1996) Membranes: Specialized Function in Plants, Bios Scientific Publishers, Oxford, UK
4. Schnitz, C. J., Gilson, P., Oxley, D., Youl, J. J., and Bacic, A. (1998) Trends Plant Sci. 3, 426-431
5. Majewska-Sawka, A., and Nothnagel, E. A. (2000) Plant Physiol. 122, 3-9
6. Kotake, T., Kaneko, S., Kubomoto, A., Haque, M. A., Kobayashi, H., and Tsumuraya, Y. (2004) Biochem. J. 377, 749-755
7. Tsumuraya, Y., Mochizuki, N., Hashimoto, Y., and Kováč, P. (1990) J. Biol. Chem. 265, 7207-7215
8. Pellerin, P., and Brillouet, J. M. (1994) Carbohydr. Res. 264, 281-291
9. Kusakabe, I., Yasui, T., and Kobayashi, T. (1975) Nippon Nogeikagaku Kaishi 49, 295-305
10. Okemoto, K., Uekita, T., Tsumuraya, Y., Hashimoto, Y., and Kasama, T. (2003) Carbohydr. Res. 338, 219-230
11. Laemmli, U. K. (1970) Nature 227, 680-685
12. Hirano, H. (1993) Analysis of Protein Structure for Gene Cloning, Tokyo Kagaku Dohjin, Tokyo
13. Kremer, S. M., and Wood, P. M. (1992) Eur. J. Biochem. 205, 133-138
14. Somogyi, N. (1952) J. Biol. Chem. 195, 19-23
15. Matsui, I., Ishikawa, K., Matsui, E., Miyairi, S., Fukui, S., and Honda, K. (1991) J. Biochem. (Tokyo) 109, 566-569
16. Tomme, P., Boraston, A., Kormos, J. M., Warren, R. A., and Kilburn, D. G. (2000) Enzyme Microb. Technol. 27, 453-458
17. Hirabayashi, J., Arata, Y., and Kasai, K. (2003) Methods Enzymol. 362, 353-368
18. Hirabayashi, J., Hashidate, T., Arata, Y., Nishi, N., Nakamura, T., Hirashima, M., Urashima, T., Oka, T., Futai, M., Muller, W. E., Yagi, F., and Kasai, K. (2002) Biochim. Biophys. Acta 1572, 232-254
19. Martinez, D., Larrondo, L. F., Putnam, N., Gelpke, M. D., Huang, K., Chapman, J., Helfenbein, K. G., Ramaiya, P., Detter, J. C., Larimer, F., Coutinho, P. M., Henrissat, B., Berka, R., Cullen, D., and Rokhsar, D. (2004) Nat. Biotechnol. 22, 695-700
20. Sekimata, M., Ogura, K., Tsumuraya, Y., Hashimoto, Y., and Yamamoto, S. (1989) Plant Physiol. 86, 155-160
21. Nurizzo, D., Turkenburg, J. P., Charnock, S. J., Roberts, S. M., Dodson, E. J., McKie, V. A., Taylor, E. J., Gilbert, H. J., and Davies, G. J. (2002) Nat. Struct. Biol. 9, 665-668
22. Czjzek, M., Bolam, D. N., Mosbah, A., Allouch, J., Fontes, C. M., Ferreira, L. M., Bornet, O., Zamboni, V., Darbon, H., Smith, N. L., Black, G. W., Henrissat, B., and Gilbert, H. J. (2001) J. Biol. Chem. 276, 48580-48587
23. Lammerts van Bueren, A., and Boraston, A. B. (2004) J. Mol. Biol. 340, 869-879
24. Henshaw, J. L., Bolam, D. N., Pires, V. M., Czjzek, M., Henrissat, B., Ferreira, L. M., Fontes, C. M., and Gilbert, H. J. (2004) J. Biol. Chem. 279, 21552-21559
25. Boraston, A. B., Notenboom, V., Warren, R. A., Kilburn, D. G., Rose, D. R., and Davies, G. (2003) J. Mol. Biol. 327, 659-669
26. Pires, V. M., Henshaw, J. L., Prates, J. A., Bolam, D. N., Ferreira, L. M., Fontes, C. M., Henrissat, B., Planas, A., Gilbert, H. J., and Czjzek, M. (2004) J. Biol. Chem. 279, 21560-21568
27. Lammerts van Bueren, A., Morland, C., Gilbert, H. J., and Boraston, A. B. (2005) J. Biol. Chem. 280, 530-537
28. Charnock, S. J., Bolam, D. N., Turkenburg, J. P., Gilbert, H. J., Ferreira, L. M., Davies, G. J., and Fontes, C. M. (2000) Biochemistry 39, 5013-5021
29. Johnson, P. E., Joshi, M. D., Tomme, P., Kilburn, D. G., and McIntosh, L. P. (1996) Biochemistry 35, 14381-14394
30. Charnock, S. J., Bolam, D. N., Nurizzo, D., Szabo, L., McKie, V. A., Gilbert, H. J., and Davies, G. J. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 14077-14082
31. Notenboom, V., Boraston, A. B., Chiu, P., Freelove, A. C., Kilburn, D. G., and Rose, D. R. (2001) J. Mol. Biol. 314, 797-806
32. Boraston, A. B., Bolam, D. N., Gilbert, H. J., and Davies, G. J. (2004) Biochem. J. 382, 769-781