Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello-and mannohexaose

Proceedings of the National Academy of Sciences of the United States of America

Volumn 99, Issue 22, 2002, Pages 14077-14082

  Charnock, Simon J ^a,c   Bolam, David N ^b   Nurizzo, Didier ^a   Szabó, Lóránd ^b   McKie, Vincent A ^b   Gilbert, Harry J ^b   Davies, Gideon J ^a  

^a UNIVERSITY OF YORK   (United Kingdom)

^b NEWCASTLE UNIVERSITY   (United Kingdom)

^c NORTHUMBRIA UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOHYDRATE; CELLOHEXAOSE; MANNAN; MANNOHEXAOSE; POLYSACCHARIDE; UNCLASSIFIED DRUG;

ARTICLE; CARBOHYDRATE ANALYSIS; CELL WALL; ENZYME SUBSTRATE COMPLEX; EUKARYOTE; LIGAND BINDING; NONHUMAN; PIROMYCES; PLANT CELL; PRIORITY JOURNAL; PROTEIN TARGETING;

BINDING SITES; CARBOHYDRATE SEQUENCE; CARBOHYDRATES; CELLULASE; CRYSTALLOGRAPHY, X-RAY; FUNGAL PROTEINS; GLYCOSIDE HYDROLASES; LIGANDS; MANNANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OLIGOSACCHARIDES; PIROMYCES; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT FUSION PROTEINS; SUBSTRATE SPECIFICITY;

EUKARYOTA; PIROMYCES; PIROMYCES EQUI;

EID: 0037195075     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.212516199     Document Type: Article

References (30)

1. Brett, C. T. & Waldren, K. (1996) Physiology and Biochemistry of Plant Cell Walls (Chapman & Hall, London).
2. Gill, J., Rixon, J. E., Bolam, D. N., McQueen-Mason, S., Simpson, P. J., Williamson, M. P., Hazlewood, G. P. & Gilbert, H. J. (1999) Biochem. J., 342, 473-480.
3. Gilbert, H. J., Bolam, D. N., Szabo, L., Xie, H., Williamson, M. P., Simpson, P. J., Jamal, S., Boraston, A. B., Kilburn, D. G. & Warren, R. A. J. (2001) in Carbohydrate Bioengineering: Interdisciplinary Approaches, eds. Teeri, T. T., Svensson, B., Gilbert, H. J. & Feizi, T. (R. Soc. Chem., Cambridge, U.K.).
4. Henrissat, B. & Bairoch, A. (1996) Biochem. J. 316, 695-696.
5. Coutinho, P. M. & Henrissat, B. (1999) in Recent Advances in Carbohydrate Engineering, eds. Gilbert, H. J., Davies, G. J., Henrissat, B. & Svensson, B. (R. Soc. Chem., Cambridge, U.K.), pp. 3-12.
6. Tormo, J., Lamed, R., Chirino, A. J., Morag, E., Bayer, E. A., Shoham, Y. & Steitz, T. A. (1996) EMBO J. 15, 5739-5751.
7. Brun, E., Johnson, P. E., Creagh, L., Tomme, P., Webster, P., Haynes, C. A. & McIntosh, L. P. (2000) Biochemistry 39, 2445-2458.
8. Szabo, L., Jamal, S., Xie, H., Charnock, S. J., Bolam, D. N., Gilbert, H. J. & Davies, G. J. (2001) J. Biol. Chem. 276, 49061-49065.
9. Gilbert, H. J., Hazlewood, G. P., Laurie, J. I., Orpin, C. G. & Xue, G. P. (1992) Mol. Microbiol. 6, 2065-2072.
10. Ali, B. R. S., Zhou, L. Q., Graves, F. M., Freedman, R. B., Black, G. W., Gilbert, H. J. & Hazlewood, G. P. (1995) FEMS Microbiol. Lett. 6, 2065-2072.
11. Fanutti, C., Ponyi, T., Black, G. W., Hazlewood, G. P. & Gilbert, H. J. (1995) J. Biol. Chem. 270, 29314-29322.
12. Freelove, A. C., Bolam, D. N., White, P., Hazlewood, G. P. & Gilbert, H. J. (2001) J. Biol. Chem. 276, 43010-43017.
13. Charnock, S. J., Bolam, D. N., Turkenburg, J. P., Gilbert, H. J., Ferreira, L. M., Davies, G. J. & Fontes, C. M. (2000) Biochemistry 39, 5013-5021.
14. Xie, H., Bolam, D. N., Nagy, T., Szabo, L., Cooper, A., Simpson, P. J., Lakey, J. H., Williamson, M. P. & Gilbert, H. J. (2001) Biochemistry 40, 5700-5707.
15. Wiseman, T., Williston, S., Brandts, J. F. & Lin, L. N. (1989) Anal. Biochem. 179, 131-137.
16. Brzozowski, A. M. & Walton, J. (2001) J. Appl. Crystallogr. 34, 97-101.
17. Otwinowski, Z. & Minor, W. (1997) Methods Enzymol. 276, 307-326.
18. Terwilliger, T. C. & Berendzen, J. (1999) Acta Crystallogr. D 55, 849-861.
19. Cowtan, K. D. & Main, P. (1996) Acta Crystallogr. D 49, 148-157.
20. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997) Acta Crystallogr. D 53, 240-255.
21. Collaborative Computational Project Number 4 (1994) Acta Crystallogr. D 50, 760-763.
22. Lamzin, V. S. & Wilson, K. S. (1993) Acta Crystallogr. D 49, 129-147.
23. Navaza, J. & Saludijan, P. (1997) Methods Enzymol. 276, 581-594.
24. Czjzek, M., Bolam, D. N., Mosbah, A., Allouch, J., Fontes, C. M., Ferreira, L. M., Bornet, O., Zamboni, V., Darbon, H., Smith, N. L., et al. (2001) J. Biol. Chem. 276, 48580-48587.
25. Holm, L. & Sander, C. (1993) J. Mol. Biol. 233, 123-138.
26. Sugiyama, H., Hisamichi, K., Usui, T., Sakai, K. & Ishiyama, J. (2000) J. Mol. Struct. 556, 173-177.
27. Boraston, A. B., Nurizzo, D., Notenboom, V., Ducros, V., Rose, D. R., Warren, R. A. J., Kilburn, D. G. & Davies, G. J. (2002) J. Mol. Biol. 319, 1143-1156.
28. Notenboom, V., Boraston, A. B., Chiu, P., Freelove, A. C. J., Kilburn, D. G. & Rose, D. R. (2001) J. Mol. Biol. 314, 797-806.
29. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
30. Esnouf, R. M. (1997) J. Mol. Graphics 15, 133-138.