Predictive models of small fish presence and abundance in northern New Zealand harbours

Estuarine, Coastal and Shelf Science

Volumn 64, Issue 2-3, 2005, Pages 419-435

  Francis, Malcolm P ^a   Morrison, Mark A ^a   Leathwick, John ^a   Walsh, Cameron ^a   Middleton, Crispin ^a  

^a NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH   (New Zealand)

Author keywords

Environment; Estuaries; Fish; GAM; Harbours; Modelling; New Zealand; Predictions

Indexed keywords

FISH; HARBOR;

EID: 21744434514     PISSN: 02727714     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecss.2005.03.007     Document Type: Article

References (51)

1. K.W. Able Measures of juvenile fish habitat quality: examples from a national estuarine research reserve American Fisheries Society Symposium 22 1999 134 147
2. M.J. Attrill A testable linear model for diversity trends in estuaries Journal of Animal Ecology 71 2002 262 269
3. M.W. Beck, K.L. Heck, and K.W. Able The identification, conservation and management of estuarine and marine nurseries for fish and invertebrates Bioscience 51 2001 633 641
4. R.G. Bell, S.V. Dumnov, and B.L. Williams Hydrodynamics of Manukau Harbour, New Zealand New Zealand Journal of Marine and Freshwater Research 32 1998 81 100
5. J.M. Chambers, and T.J. Hastie Statistical Models in S 1993 Chapman and Hall London 608 pp.
6. F.C. Coleman, W.F. Figueira, J.S. Ueland, and L.B. Crowder The Impact of United States recreational fisheries on marine fish populations Science 305 2004 1958 1960
7. D. Conover, J. Travis, and F.C. Coleman Essential fish habitat and marine reserves: an introduction to the Second Mote Symposium in Fisheries Ecology Bulletin of Marine Science 66 2000 527 534
8. T.A. Delvalls, J. Blasco, M.C. Sarasquete, J.M. Forja, and A. Gomez-parra Evaluation of heavy metal sediment toxicity in littoral ecosystems using juveniles of the fish Sparus aurata Ecotoxicology and Environmental Safety 41 1998 157 167
9. P.G.N. Digby, and R.A. Kempton Multivariate Analysis of Ecological Communities 1987 Chapman and Hall London 206 pp.
10. P.D. Eastwood, G.J. Meaden, A. Carpentier, and S.I. Rogers Estimating limits to the spatial extent and suitability of sole (Solea solea) nursery grounds in the Dover Strait Journal of Sea Research 50 2003 151 165
11. P.D. Eastwood, G.J. Meaden, and A. Grioche Modeling spatial variations in spawning habitat suitability for the sole Solea solea using regression quantiles and GIS procedures Marine Ecology Progress Series 224 2001 251 266
12. G.J. Edgar, N.S. Barrett, and P.R. Last The distribution of macroinvertebrates and fish in Tasmanian estuaries Journal of Biogeography 26 1999 1169 1189
13. M. Elliott, and F. Dewailly The structure and components of European estuarine fish assemblages Netherlands Journal of Aquatic Ecology 29 1995 397 417
14. A.H. Fielding, and J.F. Bell A review of methods for the assessment of prediction errors in conservation presence/absence models Environmental Conservation 24 1997 38 49
15. M.P. Francis Geographic distribution of marine reef fishes in the New Zealand region New Zealand Journal of Marine and Freshwater Research 30 1996 35 55
16. H.G. Gauch Multivariate Analysis in Community Ecology 1982 Cambridge University Press Cambridge 298 pp.
17. B.M. Gillanders Patterns of abundance and size structure in the blue groper, Achoerodus viridis (Pisces: Labridae): evidence of links between estuaries and coastal reefs Environmental Biology of Fishes 49 1997 153 173
18. M.J. Greenacre Theory and Applications of Correspondence Analysis 1984 Academic Press London 364 pp.
19. T.J. Hastie, and R.J. Tibshirani Generalized Additive Models 1990 Chapman and Hall London 335 pp.
20. K.L. Heck, G. Hays, and R.J. Orth Critical evaluation of the nursery role hypothesis for seagrass meadows Marine Ecology Progress Series 253 2003 123 136
21. J.S. Hindell, and G.P. Jenkins Spatial and temporal variability in the assemblage structure of fishes associated with mangroves (Avicennia marina) and intertidal mudflats in temperate Australian embayments Marine Biology 144 2004 385 395
22. T. Hume, T. Snelder, M. Weatherhead, R. Liefting, U. Shankar, and M. Hicks A new approach to classifying New Zealand's estuaries P. Kench T. Hume Proceedings of Coasts and Ports Australasian Conference 2003 2003 0-473-09832-6 (Auckland, New Zealand, CD-ROM)
23. P.D. Jones, A.O. Tyler, and A.W. Wither Decision-support systems: do they have a future in estuarine management? Estuarine, Coastal and Shelf Science 2002 55
24. R.T. Kneib The role of tidal marshes in the ecology of estuarine nekton Oceanography and Marine Biology: An Annual Review 35 1997 163 220
25. D. Kulakowski, T.T. Veblen, and S. Drinkwater The persistence of quaking Aspen (Populus tremuloides) in the Grand Mesa area, Colorado Ecological Applications 14 2004 1603 1614
26. P. Laegdsgaard, and C.R. Johnson Mangrove habitats as nurseries: unique assemblages of juvenile fish in subtropical mangroves in eastern Australia Marine Ecology Progress Series 126 1995 67 81
27. M.A. Lazzari, S. Sherman, and J.K. Kanwit Nursery use of shallow habitats by epibenthic fishes in Maine nearshore waters Estuarine, Coastal and Shelf Science 56 2003 73 84
28. L. Legendre, and P. Legendre Numerical Ecology 1983 Elsevier Scientific Publishing Amsterdam 419 pp.
29. A. Lehmann, J.R. Leathwick, and J.M. Overton GRASP v.2.4 User's Manual 2002 Landcare Research Ltd Hamilton, New Zealand http://www.cscf.ch/grasp
30. A. Lehmann, J.M. Overton, and J.R. Leathwick GRASP: generalized regression analysis and spatial prediction Ecological Modelling 157 2002 189 207
31. J. Maes, S. Van Damme, P. Meire, and F. Ollevier Statistical modeling of seasonal and environmental influences on the population dynamics of an estuarine fish community Marine Biology 145 2004 1033 1042
32. S. Marshall, and M. Elliott Environmental influences on the fish assemblage of the Humber Estuary, U.K. Estuarine, Coastal and Shelf Science 46 1998 175 184
33. E.J. Martino, and K.W. Able Fish assemblages across the marine to low salinity transition zone of a temperate estuary Estuarine, Coastal and Shelf Science 56 2003 969 987
34. F.H. McCormick, D.V. Peck, and D.P. Larsen Comparison of geographic classification schemes for mid-Atlantic stream fish assemblages Journal of the North American Benthological Society 19 2000 385 404
35. M.A. Morrison, M.P. Francis, B.W. Hartill, and D.M. Parkinson Diurnal and tidal variation in the abundance of the fish fauna of a temperate tidal mudflat Estuarine, Coastal and Shelf Science 54 2002 793 807
36. M.J. Neuman, and K.W. Able Inter-cohort differences in spatial and temporal settlement patterns of young-of-the-year windowpane (Scophthalmus aquosus) in southern New Jersey Estuarine, Coastal and Shelf Science 56 2003 527 538
37. R. Petrik, P.S. Levin, G.W. Stunz, and J. Malone Recruitment of Atlantic croaker, Micropogonias undulatus: do postsettlement processes disrupt or reinforce initial patterns of settlement? Fishery Bulletin 97 1999 954 961
38. I.C. Potter, D.J. Bird, P.N. Claridge, K.R. Clarke, G.A. Hyndes, and L.C. Newton Fish fauna of the Severn Estuary. Are there long-term changes in abundance and species composition and are the recruitment patterns of the main marine species correlated? Journal of Experimental Marine Biology and Ecology 258 2001 15 37
39. J. Rice, and A. Cooper Management of flatfish fisheries - what factors matter? Journal of Sea Research 50 2003 227 243
40. P. Ronnback, M. Troell, N. Kautsky, and J.H. Primavera Distribution patterns of shrimps and fish among Avicennia and Rhizophora microhabitats in the Pagbilao mangroves, Philippines Estuarine, Coastal and Shelf Science 48 1999 223 234
41. K.A. Smith, and M. Sinerchia Timing of recruitment events, residence periods and post-settlement growth of juvenile fish in a seagrass nursery area, south-eastern Australia Environmental Biology of Fishes 71 2004 73 84
42. C.J. Ter Braak, and I.C. Prentice A theory of gradient analysis Advances in Ecological Research 18 1988 271 317
43. R. Thiel, A. Sepúlveda, R. Kafeman, and W. Nellen Environmental factors as forces structuring the fish community of the Elbe Estuary Journal of Fish Biology 46 1995 47 69
44. C.S. Toepfer, W.L. Fisher, and W.D. Warde A multistage approach to estimate fish abundance in streams using Geographic Information Systems North American Journal of Fisheries Management 20 2000 634 645
45. A.J. Underwood, M.G. Chapman, and S.D. Connell Observations in ecology: you can't make progress on processes without understanding the patterns Journal of Experimental Marine Biology and Ecology 250 2000 97 115
46. J.P. Vieira, and J.A. Musick Latitudinal patterns in diversity of fishes in warm-temperate and tropical estuarine waters of the western Atlantic Atlantica 15 1993 115 133
47. C.M. Wagner, and H.M. Austin Correspondence between environmental gradients and summer littoral fish assemblages in low salinity reaches of the Chesapeake Bay, USA Marine Ecology Progress Series 177 1999 197 212
48. A.K. Whitfield Ichthyofaunal assemblages in estuaries: a South African case study Reviews in Fish Biology and Fisheries 9 1999 151 186
49. R.J. Wyatt Mapping the abundance of riverine fish populations: integrating hierarchical Bayesian models with a Geographic Information System (GIS) Canadian Journal of Fisheries and Aquatic Sciences 60 2003 997 1006
50. T. Ysebaert, P. Meire, P.M.J. Herman, and H. Verbeek Macrobenthic species response surfaces along estuarine gradients: prediction by logistic regression Marine Ecology Progress Series 225 2002 79 95
51. M.A. Zacharias, D.E. Howes, J.R. Harper, and P. Wainright The British Columbia marine ecosystem classification: rationale, development, and verification Coastal Management 26 1998 105 124