Cliques and duplication-divergence network growth

New Journal of Physics

Volumn 7, Issue , 2005, Pages

  Ispolatov, I ^a,c   Krapivsky, P L ^b   Mazo, I ^a   Yuryev, A ^a  

^a Ariadne Genomics Inc   (United States)

^b Boston University   (United States)

^c UNIVERSIDAD DE SANTIAGO DE CHILE   (Chile)

Author keywords

[No Author keywords available]

Indexed keywords

CLIQUES; HETERODIMERIZATION; MUTATION LINKS; PROTEIN-BINDING NETWORK;

COMPUTER SIMULATION; DIMERIZATION; MATHEMATICAL MODELS; PROBABILITY; PROTEINS;

GRAPH THEORY;

EID: 21344439052     PISSN: 13672630     EISSN: 13672630     Source Type: Journal    
DOI: 10.1088/1367-2630/7/1/145     Document Type: Article

References (25)

1. Ohno S 1970 Evolution by Gene Duplication (New York: Springer)
2. Taylor J S and Raes J 2004 Ann. Rev. Genet. 9 615-43
3. Solé R V, Pastor-Satorras R, Smith E D and Kepler T 2002 Adv. Complex Syst. 5 43
4. Vázquez A, Flammini A, Maritan A and Vespignani A 2003 ComPlexUs 1 38-44
5. Kim J, Krapivsky P L, Kahng B and Redner S 2002 Phys. Rev. E 66 055101
6. Dokholyan N V, Shakhnovich B and Shakhnovich E I 2002 Proc. Natl Acad. Sci. USA 99 14132-6
7. Ispolatov I, Krapivsky P L and Yuryev A 2004 Preprint q-bio.MN/0411052
8. Milo R, Itzkovitz S, Kashtan N, Levitt R, Shen-Orr S, Ayzenshtat I, Sheffer M and Alon U 2004 Science 303 1538
9. Milo R, Shen-Orr S, Itzkovitz S, Kashtan N, Chklovskii D and Alon U 2002 Science 298 824
10. Bianconi G, Caldarelli G and Capocci A 2003 Preprint cond-mat/0310339 Bianconi G, Caldarelli G and Capocci A 2004 Preprint cond-mat/0408349
11. Rozenfeld H D, Kirk J E, Bollt E M and ben-Avraham D 2004 Preprint cond-mat/0403536
12. Sergi D 2004 Preprint cond-mat/0412472
13. Collet P and Eckmann J P 2002 J. Stat. Phys. 109 923
14. Vazquez A, Oliveira J G and Barabasi A L 2005 Preprint cond-mat/0501399
15. Wuchty S, Oltvai Z N and Barabasi A L 2003 Nat Genet. 35 118
16. Spirin V and Mirny L A 2003 Proc. Natl Acad. Sci. USA 100 12123
17. Ispolatov I, Yuryev A, Mazo I and Maslov S 2005 Preprint q-bio.GN/0501004
18. Conant G C and Wagner A 2003 Genome Res. 13 2052
19. Kondrashov F A, Rogozin I B, Wolf Y I and Koonin E V 2002 Genome Biol. 2 Res.0008
20. Grant P A, Schieltz D, Pray-Grant M G and Yates J R III and Workman J L 1998 Mol. Cell 6 863
21. Bader G D and Hogue C W V 2002 Nat. Biotech. 20 991
22. Giot L et al 2003 Science 302 1727
23. Maslov S and Sneppen K 2002 Science 296 910
24. Janson S, Luczak T and Rucinski A 2000 Random Graphs (New York: Wiley)
25. Middendorf M, Ziv E and Wiggins C 2005 Proc. Natl Acad. Sci. USA 102 3192