-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0036434349
-
A transcriptionally active maize MuDR-like transposable element in rice and its relatives
-
Asakura, N., Nakamura, C., Ishii, T. and Kasai, Y. (2002) A transcriptionally active maize MuDR-like transposable element in rice and its relatives. Mol. Genet. Genomics, 268, 321-330.
-
(2002)
Mol. Genet. Genomics
, vol.268
, pp. 321-330
-
-
Asakura, N.1
Nakamura, C.2
Ishii, T.3
Kasai, Y.4
-
3
-
-
6044226955
-
Consistent over-estimation of gene number in complex plant genomes
-
Bennetzen, J.L., Coleman, C., Liu, R., Ma, J. and Ramakrishna, W. (2004) Consistent over-estimation of gene number in complex plant genomes. Curr. Opin. Plant Biol. 7, 732-736.
-
(2004)
Curr. Opin. Plant Biol.
, vol.7
, pp. 732-736
-
-
Bennetzen, J.L.1
Coleman, C.2
Liu, R.3
Ma, J.4
Ramakrishna, W.5
-
4
-
-
1542351273
-
Genomics tolls for QTL analysis and gene discovery
-
Borevitz, J.O. and Chory, J. (2004) Genomics tolls for QTL analysis and gene discovery. Curr. Opin. Plant Biol. 7, 132-136.
-
(2004)
Curr. Opin. Plant Biol.
, vol.7
, pp. 132-136
-
-
Borevitz, J.O.1
Chory, J.2
-
6
-
-
0036009912
-
An integrated physical and genetic map of the rice genome
-
Chen, M., Presting, G., Barbazuk, W.B. et al. (2002) An integrated physical and genetic map of the rice genome. Plant Cell, 14, 537-545.
-
(2002)
Plant Cell
, vol.14
, pp. 537-545
-
-
Chen, M.1
Presting, G.2
Barbazuk, W.B.3
-
7
-
-
0037418242
-
Comparative analyses of genomic locations and race specificities of loci for quantitative resistance to Pyricularia grisea in rice and barley
-
Chen, H., Wang, S., Xing, Y., Xu, C., Hayes, P.M. and Zhang, Q. (2003) Comparative analyses of genomic locations and race specificities of loci for quantitative resistance to Pyricularia grisea in rice and barley. Proc. Natl Acad. Sci. USA, 100, 2544-2549.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 2544-2549
-
-
Chen, H.1
Wang, S.2
Xing, Y.3
Xu, C.4
Hayes, P.M.5
Zhang, Q.6
-
8
-
-
18844379745
-
Construction and characterization of a normalized whole-life-cycle cDNA library of rice
-
Chu, Z., Peng, K., Zhang, L., Zhou, B., Wei, J. and Wang, S. (2003) Construction and characterization of a normalized whole-life-cycle cDNA library of rice. Chin. Sci. Bull. 48, 229-235.
-
(2003)
Chin. Sci. Bull.
, vol.48
, pp. 229-235
-
-
Chu, Z.1
Peng, K.2
Zhang, L.3
Zhou, B.4
Wei, J.5
Wang, S.6
-
9
-
-
0347457059
-
Molecular dissection of seedling-vigor and associated physiological traits in rice
-
Cui, K.H., Peng, S.B., Xing, Y.Z., Xu, C.G., Yu, S.B. and Zhang, Q. (2002a) Molecular dissection of seedling-vigor and associated physiological traits in rice. Theor. Appl. Genet. 105, 745-753.
-
(2002)
Theor. Appl. Genet.
, vol.105
, pp. 745-753
-
-
Cui, K.H.1
Peng, S.B.2
Xing, Y.Z.3
Xu, C.G.4
Yu, S.B.5
Zhang, Q.6
-
10
-
-
0036217386
-
Genetic analysis of the panicle traits related to yield sink size of rice
-
Cui, K.H., Peng, S.B., Xing, Y.Z., Yu, S.B. and Xu, C.G. (2002b) Genetic analysis of the panicle traits related to yield sink size of rice. Acta Genetica Sinica, 29, 144-152.
-
(2002)
Acta Genetica Sinica
, vol.29
, pp. 144-152
-
-
Cui, K.H.1
Peng, S.B.2
Xing, Y.Z.3
Yu, S.B.4
Xu, C.G.5
-
11
-
-
0036328416
-
Molecular dissection of relationship between seedling characteristics and seed size in rice
-
Cui, K.H., Peng, S.B., Xing, Y.Z., Yu, S.B. and Xu, C.G. (2002c) Molecular dissection of relationship between seedling characteristics and seed size in rice. Acta Botanica Sinica, 44, 702-707.
-
(2002)
Acta Botanica Sinica
, vol.44
, pp. 702-707
-
-
Cui, K.H.1
Peng, S.B.2
Xing, Y.Z.3
Yu, S.B.4
Xu, C.G.5
-
12
-
-
0038531138
-
Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice
-
Cui, K.H., Peng, S.B., Xing, Y.Z., Yu, S.B., Xu, C.G. and Zhang, Q. (2003) Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice. Theor. Appl. Genet. 106, 649-658.
-
(2003)
Theor. Appl. Genet.
, vol.106
, pp. 649-658
-
-
Cui, K.H.1
Peng, S.B.2
Xing, Y.Z.3
Yu, S.B.4
Xu, C.G.5
Zhang, Q.6
-
13
-
-
0037153127
-
Sequence and analysis of rice chromosome 4
-
Feng, Q., Zhang, Y., Hao, P. et al. (2002) Sequence and analysis of rice chromosome 4. Nature, 420, 316-320.
-
(2002)
Nature
, vol.420
, pp. 316-320
-
-
Feng, Q.1
Zhang, Y.2
Hao, P.3
-
14
-
-
0034887203
-
Creating the gene ontology resource: Design and implementation
-
Gene Ontology Consortium (2001) Creating the gene ontology resource: design and implementation. Genome Res. 11, 1425-1433.
-
(2001)
Genome Res.
, vol.11
, pp. 1425-1433
-
-
-
15
-
-
0037023349
-
A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
-
Goff, S.A., Ricke, D., Lan, T.H. et al. (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science, 296, 92-100.
-
(2002)
Science
, vol.296
, pp. 92-100
-
-
Goff, S.A.1
Ricke, D.2
Lan, T.H.3
-
16
-
-
0037394626
-
Genome-wide intraspecific DNA-sequence variations in rice
-
Han, B. and Xue, Y. (2003) Genome-wide intraspecific DNA-sequence variations in rice. Curr. Opin. Plant Biol. 6, 134-138.
-
(2003)
Curr. Opin. Plant Biol.
, vol.6
, pp. 134-138
-
-
Han, B.1
Xue, Y.2
-
17
-
-
0036636634
-
Mapping QTLs for horizontal resistance to sheath blight in an elite rice restorer line, Minghui 63
-
Han, Y.P., Xing, Y.Z., Chen, Z.X., Gu, S.L., Pan, X.B., Chen, X.L. and Zhang, Q.F. (2002) Mapping QTLs for horizontal resistance to sheath blight in an elite rice restorer line, Minghui 63. Acta Genetica Sinica, 29, 622-626.
-
(2002)
Acta Genetica Sinica
, vol.29
, pp. 622-626
-
-
Han, Y.P.1
Xing, Y.Z.2
Chen, Z.X.3
Gu, S.L.4
Pan, X.B.5
Chen, X.L.6
Zhang, Q.F.7
-
18
-
-
0036963688
-
Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance
-
Hua, J., Xing, Y., Xu, C., Sun, X., Yu, S. and Zhang, Q. (2002) Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance. Genetics, 162, 1885-1895.
-
(2002)
Genetics
, vol.162
, pp. 1885-1895
-
-
Hua, J.1
Xing, Y.2
Xu, C.3
Sun, X.4
Yu, S.5
Zhang, Q.6
-
19
-
-
0037418206
-
Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
-
Hua, J., Xing, Y., Wu, W., Xu, C., Sun, X., Yu, S. and Zhang, Q. (2003) Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. Proc. Natl Acad. Sci. USA, 100, 2574-2579.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 2574-2579
-
-
Hua, J.1
Xing, Y.2
Wu, W.3
Xu, C.4
Sun, X.5
Yu, S.6
Zhang, Q.7
-
20
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang, X. and Madan, A. (1999) CAP3: a DNA sequence assembly program. Genome Res. 9, 868-877.
-
(1999)
Genome Res.
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
21
-
-
0003252192
-
Preparation and analysis of eukaryotic genomic DNA
-
3rd edn. New York: Cold Spring Harbor Laboratory Press
-
Joseph, S. and David, W. (eds) (2001) Preparation and analysis of eukaryotic genomic DNA. In Molecular Cloning: A Laboratory Manual, Volume 1, 3rd edn. New York: Cold Spring Harbor Laboratory Press, pp. 6.1-6.64.
-
(2001)
Molecular Cloning: A Laboratory Manual
, vol.1
, pp. 61-664
-
-
Joseph, S.1
David, W.2
-
22
-
-
0033929144
-
2 population from a cross between the parents of an elite rice hybrid
-
2 population from a cross between the parents of an elite rice hybrid. Theor. Appl. Genet. 101, 248-254.
-
(2000)
Theor. Appl. Genet.
, vol.101
, pp. 248-254
-
-
Li, J.X.1
Yu, S.B.2
Xu, C.G.3
Tan, Y.F.4
Gao, Y.J.5
Li, X.H.6
Zhang, Q.7
-
23
-
-
0035107159
-
Mutator transposase is widespread in the grasses
-
Lisch, D.R., Freeling, M., Langham, R.J. and Choy, M.Y. (2001) Mutator transposase is widespread in the grasses. Plant Physiol. 125, 1293-1303.
-
(2001)
Plant Physiol.
, vol.125
, pp. 1293-1303
-
-
Lisch, D.R.1
Freeling, M.2
Langham, R.J.3
Choy, M.Y.4
-
24
-
-
0036796369
-
Current methods of gene prediction, their strengths and weaknesses
-
Mathe, C., Sagot, M.-F., Schiex, T. and Rouze, P. (2002) Current methods of gene prediction, their strengths and weaknesses. Nucleic Acids Res. 30, 4103-4117.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4103-4117
-
-
Mathe, C.1
Sagot, M.-F.2
Schiex, T.3
Rouze, P.4
-
25
-
-
0034201441
-
EMBOSS: The European molecular biology open software suite
-
Rice, P., Longden, I. and Bleasby, A. (2000) EMBOSS: the European molecular biology open software suite. Trends Genet. 16, 276-277.
-
(2000)
Trends Genet.
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
26
-
-
0036679565
-
Improving gene recognition accuracy by combining predictions from two gene-finding programs
-
Rogic, S., Francis Ouellette, B.F. and Mackworth, A.K. (2002) Improving gene recognition accuracy by combining predictions from two gene-finding programs. Bioinformatics, 18, 1034-1045.
-
(2002)
Bioinformatics
, vol.18
, pp. 1034-1045
-
-
Rogic, S.1
Francis Ouellette, B.F.2
Mackworth, A.K.3
-
27
-
-
0037153190
-
The genome sequence and structure of rice chromosome 1
-
Sasaki, T., Matsumoto, T., Yamamoto, K. et al. (2002) The genome sequence and structure of rice chromosome 1. Nature, 420, 312-316.
-
(2002)
Nature
, vol.420
, pp. 312-316
-
-
Sasaki, T.1
Matsumoto, T.2
Yamamoto, K.3
-
28
-
-
0032827219
-
The three important traits for cooking and eating quality of rice grains are controlled by a single locus in an elite rice hybrid, Shanyou 63
-
Tan, Y.F., Li, J.X., Yu, S.B., Xing, Z.Y., Xu, C.G. and Zhang, Q. (1999) The three important traits for cooking and eating quality of rice grains are controlled by a single locus in an elite rice hybrid, Shanyou 63. Theor. Appl. Genet. 99, 642-648.
-
(1999)
Theor. Appl. Genet.
, vol.99
, pp. 642-648
-
-
Tan, Y.F.1
Li, J.X.2
Yu, S.B.3
Xing, Z.Y.4
Xu, C.G.5
Zhang, Q.6
-
29
-
-
0033790867
-
Genetic bases of appearance quality of rice grains in Shanyou 63, an elite rice hybrid
-
Tan, Y.F., Xing, Y.Z., Li, J.X., Yu, S.B., Xu, C.G. and Zhang, Q. (2000) Genetic bases of appearance quality of rice grains in Shanyou 63, an elite rice hybrid. Theor. Appl. Genet. 101, 823-829.
-
(2000)
Theor. Appl. Genet.
, vol.101
, pp. 823-829
-
-
Tan, Y.F.1
Xing, Y.Z.2
Li, J.X.3
Yu, S.B.4
Xu, C.G.5
Zhang, Q.6
-
30
-
-
0035208919
-
Mapping quantitative trait loci for milling quality, protein content and color characteristics of rice using a recombinant inbred line population derived from an elite rice hybrid
-
Tan, Y.F., Sun, M., Xing, Y.Z., Hua, J.P., Sun, X.L., Zhang, Q. and Corke, H. (2001) Mapping quantitative trait loci for milling quality, protein content and color characteristics of rice using a recombinant inbred line population derived from an elite rice hybrid. Theor. Appl. Genet. 103, 1037-1045.
-
(2001)
Theor. Appl. Genet.
, vol.103
, pp. 1037-1045
-
-
Tan, Y.F.1
Sun, M.2
Xing, Y.Z.3
Hua, J.P.4
Sun, X.L.5
Zhang, Q.6
Corke, H.7
-
31
-
-
0038581538
-
In-depth view of structure, activity, and evolution of rice chromosome 10
-
The Rice Chromosome 10 Sequencing Consortium (2003) In-depth view of structure, activity, and evolution of rice chromosome 10. Science, 300, 1566-1569.
-
(2003)
Science
, vol.300
, pp. 1566-1569
-
-
-
32
-
-
0037624063
-
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
-
The Rice Full-Length cDNA Consortium (2003) Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 301, 376-379.
-
(2003)
Science
, vol.301
, pp. 376-379
-
-
-
33
-
-
0036009910
-
A comprehensive rice transcript map containing 6591 expressed sequence tag sites
-
Wu, J., Maehara, T., Shimokawa, T. et al. (2002) A comprehensive rice transcript map containing 6591 expressed sequence tag sites. Plant Cell, 14, 525-535.
-
(2002)
Plant Cell
, vol.14
, pp. 525-535
-
-
Wu, J.1
Maehara, T.2
Shimokawa, T.3
-
34
-
-
0042277842
-
Mapping quantitative trait loci for grain appearance traits of rice using a recombinant inbred line population
-
Xing, Y., Tan, Y., Xu, C., Hua, J. and Sun, X. (2001a) Mapping quantitative trait loci for grain appearance traits of rice using a recombinant inbred line population. Acta Botanica Sinica, 43, 840-845.
-
(2001)
Acta Botanica Sinica
, vol.43
, pp. 840-845
-
-
Xing, Y.1
Tan, Y.2
Xu, C.3
Hua, J.4
Sun, X.5
-
35
-
-
0039738396
-
Analysis of QTL x environment interaction for rice panicle characteristics
-
Xing, Y., Xu, C., Hua, J. and Tan, Y. (2001b) Analysis of QTL x environment interaction for rice panicle characteristics. Acta Genetica Sinica, 28, 439-446.
-
(2001)
Acta Genetica Sinica
, vol.28
, pp. 439-446
-
-
Xing, Y.1
Xu, C.2
Hua, J.3
Tan, Y.4
-
36
-
-
4644318235
-
Mapping and isolation of quantitative trait loci controlling plant height and heading date in rice
-
Xing, Y., Xu, C., Hua, J., Tan, Y. and Sun, X. (2001c) Mapping and isolation of quantitative trait loci controlling plant height and heading date in rice. Acta Botanica Sinica, 43, 721-726.
-
(2001)
Acta Botanica Sinica
, vol.43
, pp. 721-726
-
-
Xing, Y.1
Xu, C.2
Hua, J.3
Tan, Y.4
Sun, X.5
-
37
-
-
0036937858
-
Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice
-
Xing, Y., Tan, Y., Hua, J., Sun, X., Xu, C. and Zhang, Q. (2002) Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice. Theor. Appl. Genet. 105, 248-259.
-
(2002)
Theor. Appl. Genet.
, vol.105
, pp. 248-259
-
-
Xing, Y.1
Tan, Y.2
Hua, J.3
Sun, X.4
Xu, C.5
Zhang, Q.6
-
38
-
-
0030829363
-
Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid
-
Yu, S.B., Li, J.X., Xu, C.G., Tan, Y.F., Gao, Y.J., Li, X.H., Zhang, Q. and Saghai Maroof, M.A. (1997) Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid. Proc. Natl Acad. Sci. USA, 94, 9226-9231.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 9226-9231
-
-
Yu, S.B.1
Li, J.X.2
Xu, C.G.3
Tan, Y.F.4
Gao, Y.J.5
Li, X.H.6
Zhang, Q.7
Saghai Maroof, M.A.8
-
39
-
-
0037023384
-
A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
-
Yu, J., Hu, S., Wang, J. et al. (2002a) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science, 296, 79-92.
-
(2002)
Science
, vol.296
, pp. 79-92
-
-
Yu, J.1
Hu, S.2
Wang, J.3
-
40
-
-
0036954796
-
Identification of quantitative trait loci and epistatic interactions for plant height and heading date in rice
-
Yu, S.B., Li, J.X., Xu, C.G., Tan, Y.F., Li, X.H. and Zhang, Q. (2002b) Identification of quantitative trait loci and epistatic interactions for plant height and heading date in rice. Theor. Appl. Genet. 104, 619-625.
-
(2002)
Theor. Appl. Genet.
, vol.104
, pp. 619-625
-
-
Yu, S.B.1
Li, J.X.2
Xu, C.G.3
Tan, Y.F.4
Li, X.H.5
Zhang, Q.6
-
41
-
-
20144366003
-
The genomes of Oryza sativa: A history of duplications
-
Yu, J., Wang, J., Lin, W. et al. (2005) The genomes of Oryza sativa: a history of duplications. PLoS Biol. 3, e38.
-
(2005)
PLoS Biol.
, vol.3
-
-
Yu, J.1
Wang, J.2
Lin, W.3
-
42
-
-
0037331774
-
A new method for EST clustering
-
Zhang, L.D., Yuan, D.J., Zhang, J.W., Wang, S. and Zhang, Q. (2003) A new method for EST clustering. Acta Genetica Sinica, 30, 147-153.
-
(2003)
Acta Genetica Sinica
, vol.30
, pp. 147-153
-
-
Zhang, L.D.1
Yuan, D.J.2
Zhang, J.W.3
Wang, S.4
Zhang, Q.5
|