Two proteins mediate class II ribonucleotide reductase activity in Pseudomonas aeruginosa: Expression and transcriptional analysis of the aerobic enzymes

Journal of Biological Chemistry

Volumn 280, Issue 17, 2005, Pages 16571-16578

  Torrents, Eduard ^a   Poplawski, Andrzej ^a,b   Sjöberg, Britt Marie ^a,b  

^a STOCKHOLM UNIVERSITY   (Sweden)

^b STOCKHOLM UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; DNA; ENZYME INHIBITION; GENES; MICROORGANISMS; RNA;

ENZYME RIBONUCLEOTIDE REDUCTASE (RNR); HUMAN PATHOGEN; II RIBONUCLEOTIDE REDUCTASE; P.AERUGINOSA;

ENZYMES;

COBAMAMIDE; GENE PRODUCT; HYDROXYUREA; PROTEIN NRDJA; PROTEIN NRDJB; RIBONUCLEOTIDE REDUCTASE; RIBONUCLEOTIDE REDUCTASE CLASS I; RIBONUCLEOTIDE REDUCTASE CLASS II; RIBONUCLEOTIDE REDUCTASE CLASS III; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; DNA; NRDJA PROTEIN, PSEUDOMONAS AERUGINOSA; NRDJB PROTEIN, PSEUDOMONAS AERUGINOSA; OLIGONUCLEOTIDE; OXYGEN; RIBONUCLEASE;

AEROBIC METABOLISM; ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIUM CULTURE; BASE PAIRING; CULTURE MEDIUM; DNA REPAIR; DNA REPLICATION; ENZYME ACTIVITY; GAMMAPROTEOBACTERIA; GENETIC TRANSCRIPTION; GROWTH INHIBITION; NONHUMAN; NRDA GENE; NRDAB GENE; NRDJA GENE; NRDJAB GENE; NRDJB GENE; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OPERON; OXYGEN TENSION; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; PSEUDOMONAS AERUGINOSA; ANIMAL; BIOLOGICAL MODEL; CHEMISTRY; DOSE RESPONSE; ENZYMOLOGY; METABOLISM; MOLECULAR GENETICS; PHYLOGENY; PHYSIOLOGY; PLASMID; PROTEOBACTERIA; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TIME;

GAMMAPROTEOBACTERIA; PSEUDOMONAS AERUGINOSA;

ANIMALS; BACTERIAL PROTEINS; BASE SEQUENCE; COBAMIDES; CULTURE MEDIA; DNA; DNA REPAIR; DOSE-RESPONSE RELATIONSHIP, DRUG; HYDROXYUREA; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDES; OPEN READING FRAMES; OXYGEN; PHYLOGENY; PLASMIDS; PROTEOBACTERIA; PSEUDOMONAS AERUGINOSA; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RIBONUCLEASES; RIBONUCLEOTIDE REDUCTASES; TIME FACTORS; TRANSCRIPTION, GENETIC;

EID: 20444484498     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M501322200     Document Type: Article

References (44)

1. Lyczak, J. B., Cannon, C. L., and Pier, G. B. (2000) Microbes Infect. 2, 1051-1060
2. de Lorenzo, V. (2000) Environ. Microbiol. 2, 349-354
3. Zumft, W. G. (1997) Microbiol. Mol. Biol. Rev. 61, 533-616
4. Jordan, A., Torrents, E., Sala, I., Hellman, U., Gibert, I., and Reichard, P. (1999) J. Bacteriol. 181, 3974-3980
5. Sjöberg, B.-M. (1997) Struct. Bonding 88, 139-173
6. Jordan, A., and Reichard, P. (1998) Annu. Rev. Biochem. 67, 71-98
7. Eklund, H., Uhlin, U., Färnegårdh, M., Logan, D. T., and Nordlund, P. (2001) Prog. Biophys. Mol. Biol. 77, 177-268
8. Torrents, E., Aloy, P., Gibert, I., and Rodriguez-Trelles, F. (2002) J. Mol. Evol. 55, 138-152
9. Sun, X. Y., Ollagnier, S., Schmidt, P. P., Atta, M., Mulliez, E., Lepape, L., Eliasson, R., Gräslund, A., Fontecave, M., Reichard, P., and Sjöberg, B.-M. (1996) J. Biol. Chem. 271, 6827-6831
10. Eliasson, R., Fontecave, M., Jörnvall, H., Krook, M., Pontis, E., and Reichard, P. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 3314-3318
11. Tamarit, J., Mulliez, E., Meier, C., Trautwein, A., and Fontecave, M. (1999) J. Biol. Chem. 274, 31291-31296
12. Booker, S., Licht, S., Broderick, J., and Stubbe, J. (1994) Biochemistry 33, 12676-12685
13. Jordan, A., Torrents, E., Jeanthon, C., Eliasson, R., Hellman, U., Wernstedt, C., Barbé, J., Gibert, I., and Reichard, P. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 13487-13492
14. Borovok, I., Kreisberg-Zakarin, R., Yanko, M., Schreiber, R., Myslovati, M., Åslund, F., Holmgren, A., Cohen, G., and Aharonowitz, Y. (2002) Microbiology 148, 391-404
15. Nocentini, G. (1996) Crit. Rev. Oncol. Hematol. 22, 89-126
16. Mayhew, C. N., Phillips, J. D., Cibull, M. L., Elford, H. L., and Gallicchio, V. S. (2002) Antivir. Chem. Chemother. 13, 305-314
17. Tsimberidou, A. M., Alvarado, Y., and Giles, F. J. (2002) Expert Rev. Anticancer Ther. 2, 437-448
18. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
19. Applied Biosystems (1997) in User Bulletin 2: ABI PRISM 7700 Sequence Detection System, pp. 1-24, Applied Biosystems, Foster City, CA
20. de Lorenzo, V., Eltis, L., Kessler, B., and Timmis, K. N. (1993) Gene (Amst.) 123, 17-24
21. Thelander, L., Sjöberg, B.-M., and Eriksson, S. (1978) Methods Enzymol. 51, 227-237
22. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G. (1997) Nucleic Acids Res. 25, 4876-4882
23. Page, R. D. (1996) Comput. Appl. Biosci. 12, 357-358
24. Stover, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufhagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., and Paulsen, I. T. (2000) Nature 406, 959-964
25. Shine, J., and Dalgarno, L. (1975) Eur. J. Biochem. 57, 221-230
26. Kozak, M. (1999) Gene (Amst.) 234, 187-208
27. Arner, E. S., and Holmgren, A. (2000) Eur. J. Biochem. 267, 6102-6109
28. Rodionov, D. A., Vitreschak, A. G., Mironov, A. A., and Gelfand, M. S. (2003) J. Biol. Chem. 278, 41148-41159
29. Savli, H., Karadenizli, A., Kolayli, F., Gundes, S., Uzbek, U., and Vahaboglu, H. (2003) J. Med. Microbiol. 52, 403-408
30. Eliasson, R., Pontis, E., Jordan, A., and Reichard, P. (1999) J. Biol. Chem. 274, 7182-7189
31. Torrents, E., Eliasson, R., Wolpher, H., Gräslund, A., and Reichard, P. (2001) J. Biol. Chem. 276, 33488-33494
32. Sintchak, M. D., Arjara, G., Kellogg, B. A., Stubbe, J., and Drennan, C. L. (2002) Nat. Struct. Biol. 9, 293-300
33. Larsson, K. M., Jordan, A., Eliasson, R., Reichard, P., Logan, D. T., and Nordlund, P. (2004) Nat. Struct. Mol. Biol. 11, 1142-1149
34. Larsson, K-M. (2004) Allosteric Regulation and Radical Transfer in Ribonucleotide Reductase. Ph.D. thesis, Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden
35. Jacobson, B. A., and Fuchs, J. A. (1998) Mol. Microbiol. 28, 1307-1314
36. Torrents, E., Roca, I., and Gibert, I. (2003) Microbiology 149, 1011-1020
37. Gale, G. R., Kendall, S. M., McLain, H. H., and Dubois, S. (1964) Cancer Res. 24, 1012-1020
38. Sitjes, J., Ysern, P., Barbé, J., and Llagostera, M. (1992) Mutagenesis 7, 47-49
39. Vitreschak, A. G., Rodionov, D. A., Mironov, A. A., and Gelfand, M. S. (2003) RNA 9, 1084-1097
40. Rodionov, D. A., Dubchak, I., Arkin, A., Alm, E., and Gelfand, M. S. (2004) Genome Biol. 5, R90.1-27
41. Borovok, I., Gorovitz, B., Yanku, M., Schreiber, R., Gust, B., Chater, K., Aharonowitz, Y., and Cohen, G. (2004) Mol. Microbiol. 54, 1022-1035
42. Kasai, S., and Sumimoto, T. (2002) Eur. J. Biochem. 269, 5851-5860
43. Sabra, W., Kim, E. J., and Zeng, A. P. (2002) Microbiology 148, 3195-3202
44. Bagdasarian, M., Lurz, R., Ruckert, B., Franklin, F. C., Bagdasarian, M. M., Frey, J., and Timmis, K. N. (1981) Gene (Amst.) 16, 237-247