Caldimonas taiwanensis sp. nov., a amylase producing bacterium isolated from a hot spring

Systematic and Applied Microbiology

Volumn 28, Issue 5, 2005, Pages 415-420

  Chen, Wen Ming ^a   Chang, Jo Shu ^b   Chiu, Ching Hsiang ^a   Chang, Shu Chen ^c   Chen, Wen Chieh ^a   Jiang, Chii Ming ^a  

^a NATIONAL KAOHSIUNG UNIVERSITY OF APPLIED SCIENCES   (Taiwan)

^b NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^c TAJEN INSTITUTE OF TECHNOLOGY   (Taiwan)

Author keywords

Amylase; Caldimonas taiwanensis; Hot spring; Taxonomy; Proteobacteria

Indexed keywords

AMYLASE; BACTERIAL DNA; BACTERIAL ENZYME; CARBON; CYTOSINE; DNA 16S; DNA BASE; FATTY ACID; GUANINE; HYDROXIDE; RNA 16S; STARCH;

ARTICLE; BACTERIAL FLAGELLUM; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; BETAPROTEOBACTERIA; CALDIMONAS TAIWANENSIS; CARBON SOURCE; CELL MOTILITY; CONTROLLED STUDY; DNA DETERMINATION; DNA SEQUENCE; ENZYME ACTIVITY; ENZYME SYNTHESIS; GENE SEQUENCE; GENUS; GRAM NEGATIVE BACTERIUM; LIPID COMPOSITION; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PRIORITY JOURNAL; RNA ANALYSIS; SCREENING; TAIWAN; TEMPERATURE; THERMAL SPRING;

BETAPROTEOBACTERIA; CALDIMONAS; NEGIBACTERIA;

EID: 20444395830     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.syapm.2005.02.008     Document Type: Article

References (23)

1. P. Bernfeld Amylases α- and β- methods Enzymol 1 1955 149 158
2. C. Bertoldo, and G. Antranikian Starch-hydrolyzing enzymes from thermophilic archaea and bacteria Curr. Opin. Chem. Biol. 6 2002 151 160
3. A. Burhan, U. Nisa, C. Gökhan, C. Ömer, A. Ashabil, and G. Osman Enzymatic properties of a novel thermostable, thermophilic, alkaline and chelator resistant amylase from an alkaliphilic Bacillus sp. isolate ANT-6 Process Biochem. 38 2003 1397 1403
4. S.C. Chang, J.T. Wang, P. Vandamme, J.H. Hwang, P.S. Chang, and W.M. Chen Chitinimonas taiwanensis gen. nov., sp. nov., a novel chitinolytic bacterium isolated from a freshwater pond for shrimp culture Syst. Appl. Microbiol. 27 2004 43 49
5. W.M. Chen, S. Laevens, T.M. Lee, T. Coenye, P. De Vos, M. Mergeay, and P. Vandamme Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient Int. J. Syst. Evol. Microbiol. 51 2001 1729 1735
6. A.P. Chung, F. Rainey, M.F. Nobre, J. Burghardt, and M.S. da Costa Meiothermus cerbereus sp. nov., a new slightly thermophilic species with high levels of 3-hydroxy fatty acids Int. J. Syst. Bacteriol. 47 1997 1225 1230
7. Y.C. Chung, T. Kobayashi, H. Kanai, T. Akiba, and T. Kudo Purification and properties of extracellular amylase from the hyperthermophilic archeon Thermococccus profundus DT5432 Appl. Environ. Microbiol. 61 1995 1502 1506
8. T. Ezaki, Y. Hashimoto, and E. Yabuuchi Fluorometric DNA-DNA hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains Int. J. Syst. Bacteriol. 39 1989 224 229
9. P.C. Fahy, and G.C. Persley Plant bacterial diseases: a diagnostic guide 1983 Academic Press New York
10. W.M. Fogarty Microbial amylases W.M. Fogarty Microbial Enzymes and Biotechnology 1983 Applied Science London 1 92
11. M. Freitas, F.A. Rainey, M.F. Nobre, A.J. Silvestre, and M.S. daCosta Tepidimonas aquatica sp. nov., a new slightly thermophilic beta-proteobacterium isolated from a hot water tank Syst. Appl. Microbiol. 26 2003 376 381
12. T.A. Hall BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucleic Acids Symp. Ser. 41 1999 95 98
13. J.M. Khire Production of moderately halophilic amylase by newly isolated Micrococcus sp. 4 from a salt-pan Lett. Appl. Microbiol. 19 1994 210 212
14. E. Lévêque, Š. Janecek, B. Haye, and A. Belarbi Thermophilic archaeal amylolytic enzymes Enz. Microbiol. Technol. 26 2000 3 14
15. M. Mesbah, U. Premachandran, and W.B. Whitman Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography Int. J. Syst. Bacteriol. 39 1989 159 167
16. B.R. Mohapatra, U.C. Banerjee, and M. Bapuji Characterization of a fungal amylase from Mucor sp. associated with the marine sponge Spirastrella sp. J. Biotechnol. 60 1998. 113 117
17. C. Moreira, F.A. Rainey, M.F. Nobre, M.T. da Silva, and M.S. da Costa Tepidimonas ignava gen. nov., sp. nov., a new chemolithoheterotrophic and slightly thermophilic member of the beta-Proteobacteria Int. J. Syst. Evol. Microbiol. 50 2000 735 742
18. R.D. Page TreeView: an application to display phylogenetic trees on personal computers Comput. Appl. Biosci. 12 1996 357 358
19. D.G. Pitcher, N.A. Saunders, and R.J. Owen Rapid extraction of bacterial genomic DNA with guanidium thiocyanate Lett. Appl. Microbiol. 8 1989 151 156
20. N. Saitou, and M. Nei The neighbour-joining method: a new method for reconstructing phylogenetic trees Mol. Biol. Evol. 4 1987 406 425
21. M. Sasser, Identification of bacteria by gas chromatography of cellular fatty acids (MIDI technical note 101), Newark, MIDI Microbial ID, 1990.
22. M. Takeda, Y. Kamagata, W.C. Ghiorse, S. Hanada, and J. Koizumi Caldimonas manganoxidans gen. nov., sp. nov., a poly(3-hydroxybutyrate)- degrading, manganese-oxidizing thermophile Int. J. Syst. Evol. Microbiol. 52 2002 895 900
23. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res. 25 1997 4876 4882