Comparative transcriptome analysis of Yersinia pestis in response to hyperosmotic and high-salinity stress

Research in Microbiology

Volumn 156, Issue 3, 2005, Pages 403-415

  Han, Yanping ^a   Zhou, Dongsheng ^a   Pang, Xin ^a   Zhang, Ling ^a   Song, Yajun ^a   Tong, Zongzhong ^b   Bao, Jingyue ^a   Dai, Erhei ^a   Wang, Jin ^a   Guo, Zhaobiao ^a   Zhai, Junhui ^a   Du, Zongmin ^a   Wang, Xiaoyi ^a   Wang, Jian ^b   Huang, Peitang ^a   Yang, Ruifu ^a  

^a BEIJING INSTITUTE OF MICROBIOLOGY AND EPIDEMIOLOGY   (China)

^b INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

Author keywords

DNA microarray; High salinity stress; Hyperosmotic stress; Transcriptome analysis; Yersinia pestis

Indexed keywords

POLYSACCHARIDE; TRANSCRIPTION FACTOR; TRANSCRIPTOME;

ARTICLE; BACTERIAL GENOME; BACTERIAL VIRULENCE; COMPARATIVE STUDY; CONTROLLED STUDY; DNA MICROARRAY; DOWN REGULATION; GENE FUNCTION; GENE NUMBER; GENETIC TRANSCRIPTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SALINITY; STRESS; UPREGULATION; YERSINIA PESTIS;

YERSINIA PESTIS;

EID: 20144386744     PISSN: 09232508     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.resmic.2004.10.004     Document Type: Article

References (28)

1. R.R. Beumer, M.C. Te Giffel, L.J. Cox, F.M. Rombouts, and T. Abee Effect of exogenous proline, betaine, and carnitine on growth of Listeria monocytogenes in a minimal medium Appl. Environ. Microbiol. 60 1994 1359 1363
2. A.D. Brown Microbial water stress Bacteriol. Rev. 40 4 1976 803 846
3. T. Clementz The gene coding for 3-deoxy-manno-octulosonic acid transferase and the rfaQ gene are transcribed from divergently arranged promoters in Escherichia coli J. Bacteriol. 174 23 1992 7750 7756
4. G.R. Cornelis Yersinia type III secretion: Send in the effectors J. Cell Biol. 158 3 2002 401 408
5. G.R. Cornelis The Yersinia Ysc-Yop 'type III' weaponry Nat. Rev. Mol. Cell. Biol. 3 10 2002 742 752
6. M.W. Eshoo lac fusion analysis of the bet genes of Escherichia coli: Regulation by osmolarity, temperature, oxygen, choline, and glycine betaine J. Bacteriol. 170 11 1988 5208 5215
7. M.J. Fath, and R. Kolter ABC transporters: Bacterial exporters Microbiol. Rev. 57 4 1993 995 1017
8. U. Gophna, and E.Z. Ron Virulence and the heat shock response Int. J. Med. Microbiol. 292 7-8 2003 453 461
9. Y. Han, D. Zhou, and X. Pang Microarray analysis of temperature-induced transcriptome of Yersinia pestis Microbiol. Immunol. 48 11 2004 791 805
10. Y. Kanesaki, I. Suzuki, S.I. Allakhverdiev, K. Mikami, and N. Murata Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp. PCC 6803 Biochem. Biophys. Res. Commun. 290 1 2002 339 348
11. L.E. Lindler, and B.D. Tall Yersinia pestis pH 6 antigen forms fimbriae and is induced by intracellular association with macrophages Mol. Microbiol. 8 2 1993 311 324
12. J. Parkhill, B.W. Wren, and N.R. Thomson Genome sequence of Yersinia pestis, the causative agent of plague Nature 413 6855 2001 523 527
13. R.D. Perry, and J.D. Fetherston Yersinia pestis - etiologic agent of plague Clin. Microbiol. Rev. 10 1 1997 35 66
14. H. Pilsl, H. Killmann, K. Hantke, and V. Braun Periplasmic location of the pesticin immunity protein suggests inactivation of pesticin in the periplasm J. Bacteriol. 178 8 1996 2431 2435
15. S.B. Price, M.D. Freeman, and K.S. Yeh Transcriptional analysis of the Yersinia pestis pH 6 antigen gene J. Bacteriol. 177 20 1995 5997 6000
16. M.S. Rajeevan, D.G. Ranamukhaarachchi, S.D. Vernon, and E.R. Unger Use of real-time quantitative PCR to validate the results of cDNA array and differential display PCR technologies Methods 25 4 2001 443 451
17. J.L. Ramos, M.T. Gallegos, S. Marques, M.I. Ramos-Gonzalez, M. Espinosa-Urgel, and A. Segura Responses of Gram-negative bacteria to certain environmental stressors Curr. Opin. Microbiol. 4 2 2001 166 171
18. V.A. Rhodius, and R.A. LaRossa Uses and pitfalls of microarrays for studying transcriptional regulation Curr. Opin. Microbiol. 6 2 2003 114 119
19. F. Sebbane, A. Devalckenaere, J. Foulon, E. Carniel, and M. Simonet Silencing and reactivation of urease in Yersinia pestis is determined by one G residue at a specific position in the ureD gene Infect. Immun. 69 1 2001 170 176
20. R.D. Sleator, and C. Hill Bacterial osmoadaptation: The role of osmolytes in bacterial stress and virulence FEMS Microbiol. Rev. 26 1 2002 49 71
21. Y. Song, Z. Tong, and J. Wang Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to human DNA Res. 11 2004 153 171
22. 2+ in Yersinia pestis include structural genes for outer membrane proteins Infect. Immun. 51 2 1986 445 454
23. S.C. Straley, and R.D. Perry Environmental modulation of gene expression and pathogenesis in Yersinia Trends Microbiol. 3 8 1995 310 3177
24. V.G. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response Proc. Natl. Acad. Sci. USA 98 9 2001 5116 5121
25. D.T. Welsh Ecological significance of compatible solute accumulation by microorganisms: From single cells to global climate FEMS Microbiol. Rev. 24 3 2000 263 290
26. N.A. Whitehead, A.M. Barnard, H. Slater, N.J. Simpson, and G.P. Salmond Quorum-sensing in Gram-negative bacteria FEMS Microbiol. Rev. 25 4 2001 365 404
27. J. Young, and I.B. Holland ABC transporters: Bacterial exporters-revisited five years on Biochim. Biophys. Acta 1461 2 1999 177 200
28. D. Zhou, Y. Han, and E. Dai Identification of signature genes for rapid and specific characterization of Yersinia pestis Microbiol. Immunol. 48 4 2004 263 269