TRAV gene usage in pig T-cell receptor alpha cDNA

Immunogenetics

Volumn 57, Issue 3-4, 2005, Pages 219-225

  Yamamoto, Ryuji ^a,b,c   Uenishi, Hirohide ^a   Hatsuse, Hiromi ^b   Sato, Eimei ^c   Awata, Takashi ^a   Yasue, Hiroshi ^a   Takagaki, Yohtaroh ^b  

^a NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^b KITASATO UNIVERSITY   (Japan)

^c TOHOKU UNIVERSITY   (Japan)

Author keywords

Pig; T cell receptor alpha (TRA) chain

Indexed keywords

COMPLEMENTARY DNA; T LYMPHOCYTE RECEPTOR ALPHA CHAIN;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DNA LIBRARY; FEMALE; GENE FUNCTION; GENE IDENTIFICATION; GENE ISOLATION; GENE SEQUENCE; HUMAN; MALE; MOLECULAR CLONING; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SWINE; THYMUS;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; DNA, COMPLEMENTARY; FEMALE; GENE LIBRARY; HUMANS; MALE; MICE; MOLECULAR SEQUENCE DATA; PHYLOGENY; RECEPTORS, ANTIGEN, T-CELL, ALPHA-BETA; SEQUENCE HOMOLOGY, AMINO ACID; SPECIES SPECIFICITY; SUS SCROFA; VARIATION (GENETICS);

SUS SCROFA;

EID: 20144367350     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00251-005-0779-1     Document Type: Article

References (31)

1. Arden B, Clark SP, Kabelitz D, Mak TW (1995a) Human T-cell receptor variable gene segment families. Immunogenetics 42:455-500
2. Arden B, Clark SP, Kabelitz D, Mak TW (1995b) Mouse T-cell receptor variable gene segment families. Immunogenetics 42:501-530
3. Baron C, McMorrow I, Sachs DH, LeGuern C (2001) Persistence of dominant T cell clones in accepted solid organ transplants. J Immunol 167:4154-4160
4. Binns RM, Duncan IA, Powis SJ, Hutchings A, Butcher GW (1992) Subsets of null and gamma delta T-cell receptor+ T lymphocytes in the blood of young pigs identified by specific monoclonal antibodies. Immunology 77:219-227
5. Bosc N, Lefranc MP (2003) The mouse (Mus musculus) T cell receptor alpha (TRA) and delta (TRD) variable genes. Dev Comp Immunol 27:465-497
6. Butler JE, Sun J, Navarro P (1996) The swine Ig heavy chain locus has a single JH and no identifiable IgD. Int Immunol 8:1897-1904
7. Chou HS, Anderson SJ, Louie MC, Godambe SA, Pozzi MR, Behlke MA, Huppi K, Loh DY (1987) Tandem linkage and unusual RNA splicing of the T-cell receptor beta-chain variable-region genes. Proc Natl Acad Sci USA 84:1992-1996
8. Davis MM (1990) T cell receptor gene diversity and selection. Annu Rev Biochem 59:475-496
9. Davis MM, Boniface JJ, Reich Z, Lyons D, Hampl J, Arden B, Chien Y (1998) Ligand recognition by alpha beta T cell receptors. Annu Rev Immunol 16:523-44
10. Dufour V, Malinge S, Nau F (1996) The sheep Ig variable region repertoire consists of a single VH family. J Immunol 156:2163-2170
11. Folch G, Scaviner D, Contet V, Lefranc MP (2000) Protein displays of the human T cell receptor alpha, beta, gamma and delta variable and joining regions. Exp Clin Immunogenet 17:205-215
12. Gianello P, Fishbein JM, Sachs DH (1993) Tolerance to primarily vascularized allografts in miniature swine. Immunol Rev 133: 19-44
13. Hein WR, Mackay CR (1991) Prominence of gamma delta T cells in the ruminant immune system. Immunol Today 12:30-34
14. Hiraiwa H, Uenishi H, Kiuchi S, Watanabe M, Takagaki Y, Yasue H (2001) Assignment of T cell receptor (TCR) alpha-chain gene (A), beta-chain gene (B), gamma-chain gene (G), and delta-chain gene (D) loci on swine chromosomes by in situ hybridization and radiation hybrid mapping. Cytogenet Cell Genet 93:94-99
15. Lai E, Wilson RK, Hood LE (1989) Physical maps of the mouse and human immunoglobulin-like loci. Adv Immunol 46:1-59
16. Lefranc MP (2003) IMGT, the international ImMunoGeneTics database. Nucleic Acids Res 31:307-310
17. Lefranc M-P, Lefranc G (2001a) The T cell receptor factsbook. Academic Press, London
18. Lefranc M-P, Lefranc G (2001b) The immunoglobulin factsbook. Academic Press, London
19. Lefranc MP, Pommie C, Ruiz M, Giudicelli V, Foulquier E, Truong L, Thouvenin-Contet V, Lefranc G (2003) IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains. Dev Comp Immunol 27:55-77
20. Maniatis T, Fritseh EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, New York
21. Scaviner D, Lefranc MP (2000) The human T cell receptor alpha variable (TRAV) genes. Exp Clin Immunogenet 17:83-96
22. Scaviner D, Barbie V, Ruiz M, Lefranc MP (1999) Protein displays of the human immunoglobulin heavy, kappa and lambda variable and joining regions. Exp Clin Immunogenet 16:234-240
23. Schild H, Mavaddat N, Litzenberger C, Ehrich EW, Davis MM, Bluestone JA, Matis L, Draper RK, Chien YH (1994) The nature of major histocompatibility complex recognition by gamma delta T cells. Cell 76:29-37
24. Schrenzel MD, Ferrick DA (1995) Horse (Equus caballus) T-cell receptor alpha, gamma, and delta chain genes: nucleotide sequences and tissue-specific gene expression. Immunogenetics 42:112-122
25. Sinclair MC, Gilchrist J, Aitken R (1997) Bovine IgG repertoire is dominated by a single diversified VH gene family. J Immunol 159:3883-3889
26. Sun J, Kacskovics I, Brown WR, Butler JE (1994) Expressed swine VH genes belong to a small VH gene family homologous to human VHIII. J Immunol 153:5618-5627
27. Thome A, Saalmuller A, Pfaff E (1993) Molecular cloning of porcine T cell receptor alpha, beta, gamma and delta chains using polymerase chain reaction fragments of the constant regions. Eur J Immunol 23:1005-1010
28. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
29. Tonegawa S (1983) Somatic generation of antibody diversity. Nature 302:575-581
30. Uenishi H, Hiraiwa H, Yamamoto R, Yasue H, Takagaki Y, Shiina T, Kikkawa E, Inoko H, Awata T (2003) Genomic structure around joining segments and constant regions of swine T-cell receptor alpha/delta (TRA/TRD) locus. Immunology 109:515-526
31. Yang YG, Ohta S, Yamada S, Shimizu M, Takagaki Y (1995) Diversity of T cell receptor delta-chain cDNA in the thymus of a one-month-old pig. J Immunol 155:1981-1993