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Volumn 11, Issue 2, 2004, Pages 127-135

Prediction of the coding sequences of mouse homologues of FLJ genes: The complete nucleotide sequences of 110 mouse FLJ-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries

Author keywords

CDNA sequencing; Large proteins; MFLJ; Mouse; Novel genes; Orthologue; Protein coding region

Indexed keywords

ACYLTRANSFERASE; ADENOSINE TRIPHOSPHATASE; COMPLEMENTARY DNA; GENE PRODUCT; INTERMEDIATE FILAMENT PROTEIN; MYOSIN; PHOSPHOTRANSFERASE; VON WILLEBRAND FACTOR; ZINC FINGER PROTEIN;

EID: 19944417914     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/11.2.127     Document Type: Article
Times cited : (5)

References (22)
  • 1
    • 0242323637 scopus 로고    scopus 로고
    • Multi-domain protein families and domain pairs: Comparison with known structures and a random model of domain recombination
    • Apic, G., Huber, W., and Teichmann, S. A. 2003, Multi-domain protein families and domain pairs: comparison with known structures and a random model of domain recombination, J. Struct. Funct. Genomics, 4, 67-78.
    • (2003) J. Struct. Funct. Genomics , vol.4 , pp. 67-78
    • Apic, G.1    Huber, W.2    Teichmann, S.A.3
  • 2
    • 0028685657 scopus 로고
    • Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1
    • Nomura, N., Miyajima, N., Sazuka, T. et al. 1994, Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1, DNA Res., 1, 27-35.
    • (1994) DNA Res. , vol.1 , pp. 27-35
    • Nomura, N.1    Miyajima, N.2    Sazuka, T.3
  • 3
    • 0035981222 scopus 로고    scopus 로고
    • Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins
    • Nagase, T., Kikuno, R., and Ohara, O. 2001, Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins, DNA Res., 8, 319-327.
    • (2001) DNA Res. , vol.8 , pp. 319-327
    • Nagase, T.1    Kikuno, R.2    Ohara, O.3
  • 5
    • 0037257357 scopus 로고    scopus 로고
    • Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones
    • Jikuya, H., Takano, J., Kikuno, R. et al. 2003, Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones, DNA Res., 10, 49-57.
    • (2003) DNA Res. , vol.10 , pp. 49-57
    • Jikuya, H.1    Takano, J.2    Kikuno, R.3
  • 6
    • 0347125203 scopus 로고    scopus 로고
    • HUGE: A database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE
    • Kikuno, R., Nagase, T., Nakayama, M. et al. 2004, HUGE: a database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE, Nucleic Acids Res., 32, D502-D504.
    • (2004) Nucleic Acids Res. , vol.32
    • Kikuno, R.1    Nagase, T.2    Nakayama, M.3
  • 7
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston, R. H., Lindblad-Toh, K., Birney, E. et al. 2002, Initial sequencing and comparative analysis of the mouse genome, Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.H.1    Lindblad-Toh, K.2    Birney, E.3
  • 8
    • 0037168586 scopus 로고    scopus 로고
    • Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
    • Strausberg, R. L., Feingold, E. A., Grouse, L. H. et al. 2002, Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences, Proc. Natl. Acad. Sci. U.S.A., 99, 16899-16903.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 16899-16903
    • Strausberg, R.L.1    Feingold, E.A.2    Grouse, L.H.3
  • 9
    • 0036907106 scopus 로고    scopus 로고
    • Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set
    • VanBuren, V., Piao, Y., Dudekula, D. B. et al. 2002, Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set, Genome Res., 12, 1999-2003.
    • (2002) Genome Res. , vol.12 , pp. 1999-2003
    • VanBuren, V.1    Piao, Y.2    Dudekula, D.B.3
  • 10
    • 0142104045 scopus 로고    scopus 로고
    • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
    • Okazaki, Y., Furuno, M., Kasukawa, T. et al. 2002, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs, Nature, 420, 563-573.
    • (2002) Nature , vol.420 , pp. 563-573
    • Okazaki, Y.1    Furuno, M.2    Kasukawa, T.3
  • 11
    • 2442423958 scopus 로고    scopus 로고
    • A comprehensive approach for establishment of the platform to analyze functions of KIAA proteins: Generation and evaluation of anti-mKIAA antibodies
    • in press
    • Koga, H., Shimada, K., Hara, Y. et al. 2004, A comprehensive approach for establishment of the platform to analyze functions of KIAA proteins: Generation and evaluation of anti-mKIAA antibodies, Proteomics, in press.
    • (2004) Proteomics
    • Koga, H.1    Shimada, K.2    Hara, Y.3
  • 12
    • 0041312395 scopus 로고    scopus 로고
    • High-throughput production of recombinant antigens for mouse KIAA proteins in Escherichia coli: Computational allocation of possible antigenic regions, and construction of expression plasmids of glutathione-S-transferase- fused antigens by an in vitro recombination-assisted method
    • Hara, Y., Shimada, K., Kohga, H., Ohara, O., and Koga, H. 2003, High-throughput production of recombinant antigens for mouse KIAA proteins in Escherichia coli: computational allocation of possible antigenic regions, and construction of expression plasmids of glutathione-S-transferase-fused antigens by an in vitro recombination-assisted method, DNA Res., 10, 129-136.
    • (2003) DNA Res. , vol.10 , pp. 129-136
    • Hara, Y.1    Shimada, K.2    Kohga, H.3    Ohara, O.4    Koga, H.5
  • 13
    • 0036927813 scopus 로고    scopus 로고
    • Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    • Okazaki, N., Kikuno, R., Ohara, R. et al. 2002, Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries, DNA Res., 9, 179-188.
    • (2002) DNA Res. , vol.9 , pp. 179-188
    • Okazaki, N.1    Kikuno, R.2    Ohara, R.3
  • 14
    • 0037255081 scopus 로고    scopus 로고
    • Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    • Okazaki, N., Kikuno, R., Ohara, R. et al. 2003, Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries, DNA Res., 10, 35-48.
    • (2003) DNA Res. , vol.10 , pp. 35-48
    • Okazaki, N.1    Kikuno, R.2    Ohara, R.3
  • 15
    • 0036923947 scopus 로고    scopus 로고
    • Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method
    • Ohara, O., Nagase, T., Mitsui, G. et al. 2002, Characterization of size-fractionated cDNA libraries generated by the in vitro recombination- assisted method, DNA Res., 9, 47-57.
    • (2002) DNA Res. , vol.9 , pp. 47-57
    • Ohara, O.1    Nagase, T.2    Mitsui, G.3
  • 17
    • 0033804557 scopus 로고    scopus 로고
    • Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis
    • Hirosawa, M., Ishikawa, K., Nagase, T., and Ohara, O. 2000, Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis, Genome Res., 10, 1333-1341.
    • (2000) Genome Res. , vol.10 , pp. 1333-1341
    • Hirosawa, M.1    Ishikawa, K.2    Nagase, T.3    Ohara, O.4
  • 20
    • 0141638426 scopus 로고    scopus 로고
    • N-CoR mediates DNA methylation-dependent repression through a methyl CpG binding protein Kaiso
    • Yoon, H. G., Chan, D. W., Reynolds, A. B., Qin, J., and Wong, J. 2003, N-CoR mediates DNA methylation-dependent repression through a methyl CpG binding protein Kaiso, Mol. Cell., 12, 723-734.
    • (2003) Mol. Cell. , vol.12 , pp. 723-734
    • Yoon, H.G.1    Chan, D.W.2    Reynolds, A.B.3    Qin, J.4    Wong, J.5
  • 21
    • 0030213227 scopus 로고    scopus 로고
    • Interpreting cDNA sequences: Some insights from studies on translation
    • Kozak, M. 1996, Interpreting cDNA sequences: some insights from studies on translation, Mamm. Genome, 7, 563-574.
    • (1996) Mamm. Genome , vol.7 , pp. 563-574
    • Kozak, M.1
  • 22
    • 0032568596 scopus 로고    scopus 로고
    • Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships. PG - 6073-8
    • Brenner, S. E., Chothia, C., and Hubbard, T. J. 1998, Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships. PG - 6073-8, Proc. Natl. Acad. Sci. U.S.A., 95, 6073-6078.
    • (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 6073-6078
    • Brenner, S.E.1    Chothia, C.2    Hubbard, T.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.