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Volumn 116, Issue 1, 2005, Pages 67-76

Glycolytic oscillations and waves in an open spatial reactor: Impact of feedback regulation of phosphofructokinase

Author keywords

Continuous stirred tank reactor; Energy charge; Reaction diffusion coupling; Spatio temporal pattern formation; Supply demand; Ultrafiltration membrane

Indexed keywords

6 PHOSPHOFRUCTOKINASE; ADENOSINE PHOSPHATE; ADENOSINE TRIPHOSPHATE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE; SUGAR;

EID: 19444369398     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bpc.2005.02.002     Document Type: Article
Times cited : (39)

References (45)
  • 2
    • 0031602114 scopus 로고    scopus 로고
    • Circadian rhythms
    • F.W. Turek Circadian rhythms Horm. Res. 49 1998 109 113
    • (1998) Horm. Res. , vol.49 , pp. 109-113
    • Turek, F.W.1
  • 3
    • 1842301561 scopus 로고
    • Cyclins and cell cycle control
    • C. Norbury, and P. Nurse Cyclins and cell cycle control Curr. Biol. 1 1991 23 24
    • (1991) Curr. Biol. , vol.1 , pp. 23-24
    • Norbury, C.1    Nurse, P.2
  • 4
    • 0035926571 scopus 로고    scopus 로고
    • Regulation of the eukaryotic cell cycle: Molecular antagonism, hysteresis, and irreversible transitions
    • J.J. Tyson, and B. Novak Regulation of the eukaryotic cell cycle: molecular antagonism, hysteresis, and irreversible transitions J. Theor. Biol. 210 2001 249 263
    • (2001) J. Theor. Biol. , vol.210 , pp. 249-263
    • Tyson, J.J.1    Novak, B.2
  • 5
    • 0013770047 scopus 로고
    • Oscillations of glycolytic intermediates in yeast cells
    • A. Ghosh, and B. Chance Oscillations of glycolytic intermediates in yeast cells Biochem. Biophys. Res. Commun. 16 1964 174 181
    • (1964) Biochem. Biophys. Res. Commun. , vol.16 , pp. 174-181
    • Ghosh, A.1    Chance, B.2
  • 6
    • 0027446595 scopus 로고
    • Around the growth phase transition S. cerevisiae's make-up favours sustained oscillations of intracellular metabolites
    • P. Richard, B. Teusink, H.V. Westerhoff, and K. van Dam Around the growth phase transition S. cerevisiae's make-up favours sustained oscillations of intracellular metabolites FEBS Lett. 318 1993 80 82
    • (1993) FEBS Lett. , vol.318 , pp. 80-82
    • Richard, P.1    Teusink, B.2    Westerhoff, H.V.3    Van Dam, K.4
  • 7
    • 0013770049 scopus 로고
    • DPNH oscillations in a cell-free extract of S. carlsbergensis
    • B. Chance, B. Hess, and A. Betz DPNH oscillations in a cell-free extract of S. carlsbergensis Biochem. Biophys. Res. Commun. 16 1964 182 187
    • (1964) Biochem. Biophys. Res. Commun. , vol.16 , pp. 182-187
    • Chance, B.1    Hess, B.2    Betz, A.3
  • 8
    • 0013923438 scopus 로고
    • Reduced diphosphopyridine nucleotide oscillations in cell-free extracts from beef-heart
    • R. Frenkel Reduced diphosphopyridine nucleotide oscillations in cell-free extracts from beef-heart Arch. Biochem. Biophys. 115 1966 112 121
    • (1966) Arch. Biochem. Biophys. , vol.115 , pp. 112-121
    • Frenkel, R.1
  • 11
    • 0015935421 scopus 로고
    • The purine nucleotide cycle: III. Oscillations in metabolite concentrations during the operation of the cycle in muscle extracts
    • K. Tornheim, and J.M. Lowenstein The purine nucleotide cycle: III. Oscillations in metabolite concentrations during the operation of the cycle in muscle extracts J. Biol. Chem. 248 1973 2670 2677
    • (1973) J. Biol. Chem. , vol.248 , pp. 2670-2677
    • Tornheim, K.1    Lowenstein, J.M.2
  • 12
    • 0026416651 scopus 로고
    • Spiral calcium wave propagation and annihilation in Xenopus laevis oocytes
    • J. Lechleiter, S. Girard, E. Peralta, and D. Clapham Spiral calcium wave propagation and annihilation in Xenopus laevis oocytes Science 252 1991 123 126
    • (1991) Science , vol.252 , pp. 123-126
    • Lechleiter, J.1    Girard, S.2    Peralta, E.3    Clapham, D.4
  • 13
    • 0032530759 scopus 로고    scopus 로고
    • Imaging spreading depression and associated intracellular calcium waves in brain slices
    • T.A. Basarsky, S.N. Duffy, R.D. Andrew, and B.A. MacVicar Imaging spreading depression and associated intracellular calcium waves in brain slices J. Neurosci. 18 1998 7189 7199
    • (1998) J. Neurosci. , vol.18 , pp. 7189-7199
    • Basarsky, T.A.1    Duffy, S.N.2    Andrew, R.D.3    MacVicar, B.A.4
  • 14
    • 0031011039 scopus 로고    scopus 로고
    • Self-induced splitting of spiral-shaped spreading depression waves in chicken retina
    • M.A. Dahlem, and S.C. Müller Self-induced splitting of spiral-shaped spreading depression waves in chicken retina Exp. Brain Res. 115 1997 319 324
    • (1997) Exp. Brain Res. , vol.115 , pp. 319-324
    • Dahlem, M.A.1    Müller, S.C.2
  • 15
    • 0019465923 scopus 로고
    • Adenosine 3′,5′-monophosphate waves in Dictyostelium discoideum: A demonstration by isotope dilution-fluorography
    • K.J. Tomchik, and P.N. Devreotes Adenosine 3′,5′- monophosphate waves in Dictyostelium discoideum: a demonstration by isotope dilution-fluorography Science 212 1981 443 446
    • (1981) Science , vol.212 , pp. 443-446
    • Tomchik, K.J.1    Devreotes, P.N.2
  • 16
    • 0034688854 scopus 로고    scopus 로고
    • Imaging sustained dissipative patterns in the metabolism of individual living cells
    • H.R. Petty, R.G. Worth, and A.L. Kindzelskii Imaging sustained dissipative patterns in the metabolism of individual living cells Phys. Rev. Lett. 84 2000 2754 2757
    • (2000) Phys. Rev. Lett. , vol.84 , pp. 2754-2757
    • Petty, H.R.1    Worth, R.G.2    Kindzelskii, A.L.3
  • 17
    • 0030046478 scopus 로고    scopus 로고
    • Travelling NADH and proton waves during oscillatory glycolysis in vitro
    • T. Mair, and S.C. Müller Travelling NADH and proton waves during oscillatory glycolysis in vitro J. Biol. Chem. 271 1996 627 630
    • (1996) J. Biol. Chem. , vol.271 , pp. 627-630
    • Mair, T.1    Müller, S.C.2
  • 18
    • 0000119492 scopus 로고
    • Hierarchic spatio-temporal dynamics in glycolysis
    • T. Shinjyo, Y. Nakagawa, and T. Ueda Hierarchic spatio-temporal dynamics in glycolysis Physica, D 84 1995 212 219
    • (1995) Physica, D , vol.84 , pp. 212-219
    • Shinjyo, T.1    Nakagawa, Y.2    Ueda, T.3
  • 19
    • 0030885883 scopus 로고    scopus 로고
    • Periodic patterns in biochemical reactions
    • B. Hess Periodic patterns in biochemical reactions Q. Rev. Biophys. 30 1997 121 176
    • (1997) Q. Rev. Biophys. , vol.30 , pp. 121-176
    • Hess, B.1
  • 20
    • 0033581959 scopus 로고    scopus 로고
    • Sustained oscillations in living cells
    • S. Danø, P.G. Sørensen, and F. Hynne Sustained oscillations in living cells Nature 402 1999 320 322
    • (1999) Nature , vol.402 , pp. 320-322
    • Danø, S.1    Sørensen, P.G.2    Hynne, F.3
  • 21
    • 0032485816 scopus 로고    scopus 로고
    • Sustained oscillations in glycolysis: An experimental and theoretical study of chaotic and complex periodic behavior and of quenching of simple oscillations
    • K. Nielsen, P.G. Sørensen, F. Hynne, and H.-G. Busse Sustained oscillations in glycolysis: an experimental and theoretical study of chaotic and complex periodic behavior and of quenching of simple oscillations Biophys. Chem. 72 1998 49 62
    • (1998) Biophys. Chem. , vol.72 , pp. 49-62
    • Nielsen, K.1    Sørensen, P.G.2    Hynne, F.3    Busse, H.-G.4
  • 23
    • 0019234269 scopus 로고
    • Self-organization of a glycolytic reconstituted enzyme system: Alternate stable stationary states, hysteretic transition and stabilization of the energy charge
    • W. Schellenberger, K. Eschrich, and E. Hofmann Self-organization of a glycolytic reconstituted enzyme system: alternate stable stationary states, hysteretic transition and stabilization of the energy charge Adv. Enzyme Regul. 19 1980 257 284
    • (1980) Adv. Enzyme Regul. , vol.19 , pp. 257-284
    • Schellenberger, W.1    Eschrich, K.2    Hofmann, E.3
  • 24
    • 0020724042 scopus 로고
    • Experimental evidence and theoretical discussion for long-term oscillations of phosphofructokinase in a compartmentalized system
    • J.-F. Hervagault, and D. Thomas Experimental evidence and theoretical discussion for long-term oscillations of phosphofructokinase in a compartmentalized system Eur. J. Biochem. 131 1983 183 187
    • (1983) Eur. J. Biochem. , vol.131 , pp. 183-187
    • Hervagault, J.-F.1    Thomas, D.2
  • 25
    • 11644269639 scopus 로고
    • Sustained spiral waves in a continuously fed unstirred chemical reactor
    • W.Y. Tam, W. Horsthemke, Z. Noszticzius, and H.L. Swinney Sustained spiral waves in a continuously fed unstirred chemical reactor J. Chem. Phys. 88 1988 3395 3396
    • (1988) J. Chem. Phys. , vol.88 , pp. 3395-3396
    • Tam, W.Y.1    Horsthemke, W.2    Noszticzius, Z.3    Swinney, H.L.4
  • 27
    • 5544250703 scopus 로고
    • Experimental evidence of a sustained standing Turing-Type nonequilibrium chemical patterns
    • V. Castets, E. Dulos, J. Boissonade, and P. De Kepper Experimental evidence of a sustained standing Turing-Type nonequilibrium chemical patterns Phys. Rev. Lett. 64 1990 2953 2956
    • (1990) Phys. Rev. Lett. , vol.64 , pp. 2953-2956
    • Castets, V.1    Dulos, E.2    Boissonade, J.3    De Kepper, P.4
  • 28
    • 34047187677 scopus 로고
    • Transition from a uniform state to hexagonal and striped Turing patterns
    • Q. Ouyang, and H.L. Swinney Transition from a uniform state to hexagonal and striped Turing patterns Nature 352 1991 610 612
    • (1991) Nature , vol.352 , pp. 610-612
    • Ouyang, Q.1    Swinney, H.L.2
  • 29
    • 0000523227 scopus 로고    scopus 로고
    • Experimental studies and quantitative modeling of Turing patterns in the (chlorine dioxide, iodine, malonic acid) reaction
    • B. Rudovics, E. Barillot, P.W. Davies, E. Dulos, J. Boissonade, and P. De Kepper Experimental studies and quantitative modeling of Turing patterns in the (chlorine dioxide, iodine, malonic acid) reaction J. Phys. Chem. 1999 1790 1800
    • (1999) J. Phys. Chem. , pp. 1790-1800
    • Rudovics, B.1    Barillot, E.2    Davies, P.W.3    Dulos, E.4    Boissonade, J.5    De Kepper, P.6
  • 30
    • 0014358377 scopus 로고
    • Mechanism of glycolytic oscillation in yeast: 1. Aerobic and anaerobic growth conditions for obtaining glycolytic oscillations
    • B. Hess, and A. Boiteux Mechanism of glycolytic oscillation in yeast: 1. Aerobic and anaerobic growth conditions for obtaining glycolytic oscillations Hoppe-Seyler Z. Physiol. Chem. 349 1968 1567 1574
    • (1968) Hoppe-Seyler Z. Physiol. Chem. , vol.349 , pp. 1567-1574
    • Hess, B.1    Boiteux, A.2
  • 31
    • 0003443846 scopus 로고
    • Verlag Chemie Weinheim/Academic Press Inc. New York
    • H.U. Bergmeyer Methods of Enzymatic Analysis vol. III 1974 Verlag Chemie Weinheim/Academic Press Inc. New York
    • (1974) Methods of Enzymatic Analysis , vol.3
    • Bergmeyer, H.U.1
  • 32
    • 0001221187 scopus 로고
    • Patterns of spatiotemporal organization in an allosteric enzyme model
    • A. Goldbeter Patterns of spatiotemporal organization in an allosteric enzyme model Proc. Natl. Acad. Sci. 70 1973 3255 3259
    • (1973) Proc. Natl. Acad. Sci. , vol.70 , pp. 3255-3259
    • Goldbeter, A.1
  • 33
    • 0014007266 scopus 로고
    • Continuous oscillations in a cell-free extract of S. carlsbergensis
    • B. Hess, and K. Brand Continuous oscillations in a cell-free extract of S. carlsbergensis Biochem. Biophys. Res. Commun. 23 1966 102 108
    • (1966) Biochem. Biophys. Res. Commun. , vol.23 , pp. 102-108
    • Hess, B.1    Brand, K.2
  • 35
    • 0022335838 scopus 로고
    • Temporal organization of the phosphofructokinase/fructode-1,6- bisphosphatase cycle
    • E. Hofmann, K. Eschrich, and W. Schellenberger Temporal organization of the phosphofructokinase/fructode-1,6-bisphosphatase cycle Adv. Enzyme Regul. 23 1985 331 362
    • (1985) Adv. Enzyme Regul. , vol.23 , pp. 331-362
    • Hofmann, E.1    Eschrich, K.2    Schellenberger, W.3
  • 37
    • 0036039059 scopus 로고    scopus 로고
    • Experimental supply-demand analysis of anaerobic yeast energy metabolism
    • O. Kroukamp, J.M. Rohwer, J.-H.S. Hofmeyr, and J.L. Snoep Experimental supply-demand analysis of anaerobic yeast energy metabolism Mol. Biol. Rep. 29 2002 203 209
    • (2002) Mol. Biol. Rep. , vol.29 , pp. 203-209
    • Kroukamp, O.1    Rohwer, J.M.2    Hofmeyr, J.-H.S.3    Snoep, J.L.4
  • 38
    • 0032534832 scopus 로고    scopus 로고
    • A control analysis exploration of the role of ATP utilisation in glycolytic-flux control and glycolytic-metabolite-concentration regulation
    • S. Thomas, and D. Fell A control analysis exploration of the role of ATP utilisation in glycolytic-flux control and glycolytic-metabolite-concentration regulation Eur. J. Biochem. 258 1998 956 967
    • (1998) Eur. J. Biochem. , vol.258 , pp. 956-967
    • Thomas, S.1    Fell, D.2
  • 39
    • 0343457972 scopus 로고    scopus 로고
    • The importance of ATP as a regulator of glycolytic flux in Saccharomyces cerevisiae
    • C. Larsson, I.-I. Påhlman, and L. Gustafsson The importance of ATP as a regulator of glycolytic flux in Saccharomyces cerevisiae Yeast 16 2000 797 809
    • (2000) Yeast , vol.16 , pp. 797-809
    • Larsson, C.1    Påhlman, I.-I.2    Gustafsson, L.3
  • 40
    • 0020014536 scopus 로고
    • Transition between alternate ATP-producing and ATP-consuming stationary states in a reconstituted enzyme system containing phosphofructokinase
    • K. Eschrich, W. Schellenberger, and E. Hofmann Transition between alternate ATP-producing and ATP-consuming stationary states in a reconstituted enzyme system containing phosphofructokinase Acta Biol. Med. Ger. 41 1982 415 424
    • (1982) Acta Biol. Med. Ger. , vol.41 , pp. 415-424
    • Eschrich, K.1    Schellenberger, W.2    Hofmann, E.3
  • 41
    • 0019603246 scopus 로고
    • Self-stabilization of the energy charge in a reconstituted enzyme system containing phosphofructokinase
    • W. Schellenberger, K. Eschrich, and E. Hofmann Self-stabilization of the energy charge in a reconstituted enzyme system containing phosphofructokinase Eur. J. Biochem. 118 1981 309 314
    • (1981) Eur. J. Biochem. , vol.118 , pp. 309-314
    • Schellenberger, W.1    Eschrich, K.2    Hofmann, E.3
  • 42
    • 0030608156 scopus 로고    scopus 로고
    • Control of frequency and amplitudes is shared by all enzymes in three models for yeast glycolytic oscillations
    • B. Teusink, B.M. Bakker, and H.V. Westerhoff Control of frequency and amplitudes is shared by all enzymes in three models for yeast glycolytic oscillations Biochim. Biophys. Acta 1275 1996 204 212
    • (1996) Biochim. Biophys. Acta , vol.1275 , pp. 204-212
    • Teusink, B.1    Bakker, B.M.2    Westerhoff, H.V.3


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