메뉴 건너뛰기




Volumn 43, Issue 16, 2004, Pages 4764-4772

zFP538, a Yellow Fluorescent Protein from Coral, Belongs to the DsRed Subfamily of GFP-Like Proteins but Possesses the Unexpected Site of Fragmentation

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION; BATHYMETRY; CHROMOPHORES; EMISSION SPECTROSCOPY; FLUORESCENCE; HYDROLYSIS;

EID: 1942470503     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi036059a     Document Type: Article
Times cited : (18)

References (43)
  • 1
    • 0031663369 scopus 로고    scopus 로고
    • The green fluorescent protein
    • Tsien, R. Y. (1998) The green fluorescent protein. Annu. Rev. Biochem. 67, 509-544.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 509-544
    • Tsien, R.Y.1
  • 4
    • 0027465627 scopus 로고
    • Chemical structure of the hexapeptide chromophore of the Aequorea green-fluorescent protein
    • Cody, C. W., Prasher, D. C., Westler, W. M., Prendergast, F. G., and Ward, W. W. (1993) Chemical structure of the hexapeptide chromophore of the Aequorea green-fluorescent protein. Biochemistry 32, 1212-1218.
    • (1993) Biochemistry , vol.32 , pp. 1212-1218
    • Cody, C.W.1    Prasher, D.C.2    Westler, W.M.3    Prendergast, F.G.4    Ward, W.W.5
  • 5
    • 0029847806 scopus 로고    scopus 로고
    • Crystal structure of the Aequorea victoria green fluorescent protein
    • Ormö, M., Cubitt, A. B., Kallio, K., Gross, L. A., Tsien, R. Y., and Remington, S. J. (1996) Crystal structure of the Aequorea victoria green fluorescent protein. Science 273, 1392-1395.
    • (1996) Science , vol.273 , pp. 1392-1395
    • Ormö, M.1    Cubitt, A.B.2    Kallio, K.3    Gross, L.A.4    Tsien, R.Y.5    Remington, S.J.6
  • 7
    • 0033674629 scopus 로고    scopus 로고
    • The structural basis for red fluorescence in the tetrameric GFP homolog DsRed
    • Wall, M. A., Sokolich, M., and Ranganathan, R. (2000) The structural basis for red fluorescence in the tetrameric GFP homolog DsRed. Nat. Struct. Biol. 7, 1133-1138.
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 1133-1138
    • Wall, M.A.1    Sokolich, M.2    Ranganathan, R.3
  • 8
    • 0035895225 scopus 로고    scopus 로고
    • Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-Å resolution
    • Yarbrough, D., Wachter, R. M., Kallio, K., Matz, M. V., and Remington, S. J. (2001) Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-Å resolution. Proc. Natl. Acad. Sci. U.S.A. 98, 462-467.
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 462-467
    • Yarbrough, D.1    Wachter, R.M.2    Kallio, K.3    Matz, M.V.4    Remington, S.J.5
  • 9
    • 0141749127 scopus 로고    scopus 로고
    • The 2.2 Å crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation
    • Prescott, M., Ling, M., Beddoe, T., Oakley, A. J., and Dove, S. (2003) The 2.2 Å crystal structure of a pocilloporin pigment reveals a nonplanar chromophore conformation. Structure (Camb.) 11, 275-284.
    • (2003) Structure (Camb.) , vol.11 , pp. 275-284
    • Prescott, M.1    Ling, M.2    Beddoe, T.3    Oakley, A.J.4    Dove, S.5
  • 10
    • 0242666241 scopus 로고    scopus 로고
    • The 2.0 Å crystal structure of eqFP611, a far-red fluorescent protein from the sea anemone Entacmaea quadricolor
    • Petersen, J., Wilmann, P. G., Beddoe, T., Oakley, A. J., Devenish, R. J., Prescott, M., and Rossjohn, J. (2003) The 2.0 Å crystal structure of eqFP611, a far-red fluorescent protein from the sea anemone Entacmaea quadricolor. J. Biol. Chem. 278, 44626-44631.
    • (2003) J. Biol. Chem. , vol.278 , pp. 44626-44631
    • Petersen, J.1    Wilmann, P.G.2    Beddoe, T.3    Oakley, A.J.4    Devenish, R.J.5    Prescott, M.6    Rossjohn, J.7
  • 11
    • 0035877639 scopus 로고    scopus 로고
    • Alternative cyclization in GFP-like protein family: The formation and structure of the chromophore of a purple chromoprotein from Anemonia sulcata
    • Martynov, V. I., Savitsky, A. P., Martynova, N. Y., Savitsky, P. A., Lukyanov, K. A., and Lukyanov, S. A. (2001) Alternative cyclization in GFP-like protein family: The formation and structure of the chromophore of a purple chromoprotein from Anemonia sulcata. J. Biol. Chem. 276, 21012-21016.
    • (2001) J. Biol. Chem. , vol.276 , pp. 21012-21016
    • Martynov, V.I.1    Savitsky, A.P.2    Martynova, N.Y.3    Savitsky, P.A.4    Lukyanov, K.A.5    Lukyanov, S.A.6
  • 12
    • 0345306724 scopus 로고    scopus 로고
    • A purple-blue chromoprotein from Goniopora tenuidens belongs to the DsRed subfamily of GFP-like proteins
    • Martynov, V. I., Maksimov, B. I., Martynova, N. Y., Pakhomov, A. A., Gurskaya, N. G., and Lukyanov, S. A. (2003) A purple-blue chromoprotein from Goniopora tenuidens belongs to the DsRed subfamily of GFP-like proteins. J. Biol. Chem. 278, 46288-46292.
    • (2003) J. Biol. Chem. , vol.278 , pp. 46288-46292
    • Martynov, V.I.1    Maksimov, B.I.2    Martynova, N.Y.3    Pakhomov, A.A.4    Gurskaya, N.G.5    Lukyanov, S.A.6
  • 13
    • 0242361312 scopus 로고    scopus 로고
    • Photo-induced peptide cleavage in the green-to-red conversion of a fluorescent protein
    • Mizuno, H., Mal, T. K., Tong, K. I., Ando, R., Furuta, T., Ikura, M., and Miyawaki, A. (2003) Photo-induced peptide cleavage in the green-to-red conversion of a fluorescent protein. Mol. Cell 12, 1051-1058.
    • (2003) Mol. Cell , vol.12 , pp. 1051-1058
    • Mizuno, H.1    Mal, T.K.2    Tong, K.I.3    Ando, R.4    Furuta, T.5    Ikura, M.6    Miyawaki, A.7
  • 15
    • 5144233105 scopus 로고
    • MLEV-17-based two-dimensional homonuclear magnetization transfer spectroscopy
    • Bax, A., and Davis, D. G. (1985) MLEV-17-based two-dimensional homonuclear magnetization transfer spectroscopy. J. Magn. Reson. 65, 355-366.
    • (1985) J. Magn. Reson. , vol.65 , pp. 355-366
    • Bax, A.1    Davis, D.G.2
  • 16
    • 5144229966 scopus 로고
    • Practical aspects of two-dimensional transverse NOE spectroscopy
    • Bax, A., and Davis, D. G. (1985) Practical aspects of two-dimensional transverse NOE spectroscopy. J. Magn. Reson. 63, 207-213.
    • (1985) J. Magn. Reson. , vol.63 , pp. 207-213
    • Bax, A.1    Davis, D.G.2
  • 17
    • 2642628181 scopus 로고
    • 2D NOE with pure absorption phase in four quadrants
    • States, D. J., Habercorn, R. A., and Ruben, D. J. (1982) 2D NOE with pure absorption phase in four quadrants. J. Magn. Reson. 48, 286-292.
    • (1982) J. Magn. Reson. , vol.48 , pp. 286-292
    • States, D.J.1    Habercorn, R.A.2    Ruben, D.J.3
  • 18
    • 0026951903 scopus 로고
    • Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
    • Piotto, M., Saudek, V., and Sklenar, V. (1992) Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J. Biomol. NMR 2, 661-665.
    • (1992) J. Biomol. NMR , vol.2 , pp. 661-665
    • Piotto, M.1    Saudek, V.2    Sklenar, V.3
  • 19
    • 33644757144 scopus 로고
    • Correlation of proton and nitrogen-15 chemical shifts by multiple quantum NMR
    • Bax, A., Griffey, R. H., and Hawkins, B. L. (1983) Correlation of proton and nitrogen-15 chemical shifts by multiple quantum NMR. J. Magn. Reson. 55, 301-315.
    • (1983) J. Magn. Reson. , vol.55 , pp. 301-315
    • Bax, A.1    Griffey, R.H.2    Hawkins, B.L.3
  • 20
    • 0010285919 scopus 로고
    • Sensitivity-enhanced two-dimensional heteronuclear shift correlation NMR spectroscopy
    • Bax, A., and Subramanian, S. (1986) Sensitivity-enhanced two-dimensional heteronuclear shift correlation NMR spectroscopy. J. Magn. Reson. 67, 565-569.
    • (1986) J. Magn. Reson. , vol.67 , pp. 565-569
    • Bax, A.1    Subramanian, S.2
  • 21
    • 0345311216 scopus 로고
    • 13C assignments from sensitivity-enhanced detection of heteronuclear multiple-bond connectivity by 2D multiple quantum NMR
    • 13C assignments from sensitivity-enhanced detection of heteronuclear multiple-bond connectivity by 2D multiple quantum NMR. J. Am. Chem. Soc. 108, 2093-2094.
    • (1986) J. Am. Chem. Soc. , vol.108 , pp. 2093-2094
    • Bax, A.1    Summers, M.F.2
  • 24
    • 0000360525 scopus 로고
    • Structure of the chromophore of Aequorea green fluorescent protein
    • Shimomura, O. (1979) Structure of the chromophore of Aequorea green fluorescent protein. FEBS Lett. 104, 220-222.
    • (1979) FEBS Lett. , vol.104 , pp. 220-222
    • Shimomura, O.1
  • 26
    • 84985493765 scopus 로고
    • Spectrophotometric identity of the energy transfer chromophores in Renilla and Aequorea green-fluorescent proteins
    • Ward, W. W., Cody, C. W., Hart, R. C., and Cormier, M. J. (1980) Spectrophotometric identity of the energy transfer chromophores in Renilla and Aequorea green-fluorescent proteins. Photochem. Photobiol. 31, 611-615.
    • (1980) Photochem. Photobiol. , vol.31 , pp. 611-615
    • Ward, W.W.1    Cody, C.W.2    Hart, R.C.3    Cormier, M.J.4
  • 27
    • 0037007743 scopus 로고    scopus 로고
    • Synthesis and spectroscopic studies of model red fluorescent protein chromophores
    • He, X., Bell, A. F., and Tonge, P. J. (2002) Synthesis and spectroscopic studies of model red fluorescent protein chromophores. Org. Lett. 4, 1523-1526.
    • (2002) Org. Lett. , vol.4 , pp. 1523-1526
    • He, X.1    Bell, A.F.2    Tonge, P.J.3
  • 28
    • 33947489306 scopus 로고
    • The chemistry of imines
    • Layer, R. W. (1963) The chemistry of imines. Chem. Rev. 63, 489-510.
    • (1963) Chem. Rev. , vol.63 , pp. 489-510
    • Layer, R.W.1
  • 32
    • 0001644801 scopus 로고
    • N-benzoyl-benzaldimines and N-α-alkoxybenzylbenzamides
    • Breuer, S. W., Bernath, T., and Ben-Ishai, D. (1967) N-benzoyl-benzaldimines and N-α-alkoxybenzylbenzamides. Tetrahedron 23, 2869-2877.
    • (1967) Tetrahedron , vol.23 , pp. 2869-2877
    • Breuer, S.W.1    Bernath, T.2    Ben-Ishai, D.3
  • 33
    • 0011341954 scopus 로고
    • Lineare N-Acylimine - Eine eigenständige Verbindungklasse? I. N-Acyl-aldimine
    • Malassa, V. I., and Matthies, D. (1987) Lineare N-Acylimine - eine eigenständige Verbindungklasse? I. N-Acyl-aldimine, Chem.-Z. 111, 181-185.
    • (1987) Chem.-Z. , vol.111 , pp. 181-185
    • Malassa, V.I.1    Matthies, D.2
  • 34
    • 0007401968 scopus 로고
    • Lineare N-Acylimine - Eine eigenständige Verbindungklasse? II. N-Acyl-ketimine
    • Malassa, V. I., and Matthies, D. (1987) Lineare N-Acylimine - eine eigenständige Verbindungklasse? II. N-Acyl-ketimine, Chem.-Z. 111, 253-261.
    • (1987) Chem.-Z. , vol.111 , pp. 253-261
    • Malassa, V.I.1    Matthies, D.2
  • 35
    • 84988139737 scopus 로고
    • A facile method for the synthesis of substituted N-methylenecarboxamides and alkyl N-methylenecarbamates
    • Kupfer, R., Meier, S., and Wurthwein, E.-U. (1984) A facile method for the synthesis of substituted N-methylenecarboxamides and alkyl N-methylenecarbamates. Synthesis, 688-690.
    • (1984) Synthesis , pp. 688-690
    • Kupfer, R.1    Meier, S.2    Wurthwein, E.-U.3
  • 36
    • 84912157111 scopus 로고
    • Iminomagnésiens. III. - Propriétés d'acylimines et acylénamines
    • Heng Suen, Y., and Kagan, H. B. (1965) Iminomagnésiens. III. - Propriétés d'acylimines et acylénamines. Bull. Soc. Chim. Fr. 5, 1460-1463.
    • (1965) Bull. Soc. Chim. Fr. , vol.5 , pp. 1460-1463
    • Heng Suen, Y.1    Kagan, H.B.2
  • 37
    • 0040514829 scopus 로고
    • Cholesterol and related compounds. V. Synthesis of aza-D-homosteroids
    • Tsuda, K., and Hayatsu, R. (1956) Cholesterol and related compounds. V. Synthesis of aza-D-homosteroids. J. Am. Chem. Soc. 78, 4107-4111.
    • (1956) J. Am. Chem. Soc. , vol.78 , pp. 4107-4111
    • Tsuda, K.1    Hayatsu, R.2
  • 38
    • 37049070544 scopus 로고
    • Tautomerism in some acetamido derivatives of nitrogen-containing heterocycles: X-ray structural analysis of 2-amino and 2-imino forms of benzothiazole derivatives
    • Annese, M., Corradi, A. B., Forlani, L., Rizzoli, C., and Sgarabotto, P. (1994) Tautomerism in some acetamido derivatives of nitrogen-containing heterocycles: X-ray structural analysis of 2-amino and 2-imino forms of benzothiazole derivatives. J. Chem. Soc., Perkin Trans. 2, 615-621.
    • (1994) J. Chem. Soc., Perkin Trans. , vol.2 , pp. 615-621
    • Annese, M.1    Corradi, A.B.2    Forlani, L.3    Rizzoli, C.4    Sgarabotto, P.5
  • 39
    • 0000774184 scopus 로고    scopus 로고
    • Spectroscopic characterization by laser flash photolysis of electrophilic intermediates derived from 4-aminostilbenes. Stilbene "nitrenium" ions and quinone methide imines
    • Bose, R., Ahmad, A. R., Dicks, A. P., Novak, M., Kayser, K. J., and McClelland, R. A. (1999) Spectroscopic characterization by laser flash photolysis of electrophilic intermediates derived from 4-aminostilbenes. Stilbene "nitrenium" ions and quinone methide imines. J. Chem. Soc., Perkin Trans. 2, 1591-1599.
    • (1999) J. Chem. Soc., Perkin Trans. , vol.2 , pp. 1591-1599
    • Bose, R.1    Ahmad, A.R.2    Dicks, A.P.3    Novak, M.4    Kayser, K.J.5    McClelland, R.A.6
  • 40
    • 33947561544 scopus 로고
    • Nonenzymatic cleavages of peptide chains at the cysteine and serine residues through their conversion into dehydroalanine. I. Hydrolytic and oxidative cleavage of dehydroalanine residues
    • Patchornik, A., and Sokolovsky, M. (1964) Nonenzymatic cleavages of peptide chains at the cysteine and serine residues through their conversion into dehydroalanine. I. Hydrolytic and oxidative cleavage of dehydroalanine residues. J. Am. Chem. Soc. 86, 1206-1212.
    • (1964) J. Am. Chem. Soc. , vol.86 , pp. 1206-1212
    • Patchornik, A.1    Sokolovsky, M.2
  • 41
    • 0006415207 scopus 로고
    • Retrodienic reactions. Part 14. Flash-thermolytic synthesis of reactive N-acylmethanimines
    • Lasne, M.-C., Ripoll, J.-L., and Thuillier, A. (1982) Retrodienic reactions. Part 14. Flash-thermolytic synthesis of reactive N-acylmethanimines. J. Chem. Res. (S), 214-215.
    • (1982) J. Chem. Res. (S) , pp. 214-215
    • Lasne, M.-C.1    Ripoll, J.-L.2    Thuillier, A.3
  • 43
    • 37049159362 scopus 로고
    • Some consequences of the additive property of the activated azomethine group
    • Davies, W., Ramsay, T. H., and Stove, E. R. (1949) Some consequences of the additive property of the activated azomethine group. J. Chem. Soc., 2633-2637.
    • (1949) J. Chem. Soc. , pp. 2633-2637
    • Davies, W.1    Ramsay, T.H.2    Stove, E.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.