메뉴 건너뛰기




Volumn 9, Issue 4, 2004, Pages 271-278

RMF inactivates ribosomes by covering the peptidyl transferase centre and entrance of peptide exit tunnel

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC AGENT; BACTERIAL PROTEIN; BACTERIAL RNA; CHLORAMPHENICOL; DIMER; DIMETHYL SULFATE; ERYTHROMYCIN; PEPTIDE; PEPTIDYLTRANSFERASE; PROTEIN S 100; PROTEIN SUBUNIT; RIBOSOME INACTIVATING PROTEIN; RIBOSOME RNA; RNA 23S;

EID: 1942455714     PISSN: 13569597     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1356-9597.2004.00723.x     Document Type: Article
Times cited : (51)

References (22)
  • 1
    • 2942571539 scopus 로고    scopus 로고
    • The comparative RNA web (CPW) site: An online database of comparative sequence and structure information for ribosomal intron, and other RNA's: Correction
    • Cannone, J.J., Subramanian, S., Schnare, M.N., et al. (2002) The comparative RNA web (CPW) site: an online database of comparative sequence and structure information for ribosomal intron, and other RNA's: Correction. BMC Bioinformat. 3, 2-31.
    • (2002) BMC Bioinformat. , vol.3 , pp. 2-31
    • Cannone, J.J.1    Subramanian, S.2    Schnare, M.N.3
  • 2
    • 0038013670 scopus 로고    scopus 로고
    • Structures of five antibiotics bound at the peptidyl transferase center of the large ribosomal subunit
    • Hansen, J.L., Moore, P.B. & Steitz, T.A. (2003) Structures of five antibiotics bound at the peptidyl transferase center of the large ribosomal subunit. J. Mol. Biol. 330, 1061-1075.
    • (2003) J. Mol. Biol. , vol.330 , pp. 1061-1075
    • Hansen, J.L.1    Moore, P.B.2    Steitz, T.A.3
  • 3
    • 0035977093 scopus 로고    scopus 로고
    • High resolution structure of the large ribosomal subunit from a methophilic eubacterium
    • Harms, J., Schluenzen, F., Zarivach, R., et al. (2001) High resolution structure of the large ribosomal subunit from a methophilic eubacterium. Cell 107, 679-688.
    • (2001) Cell , vol.107 , pp. 679-688
    • Harms, J.1    Schluenzen, F.2    Zarivach, R.3
  • 4
    • 0028151657 scopus 로고
    • Translational control of GCN4: An in vivo barometer of initiation-factor activity
    • Hinnebusch, A.G. (1994) Translational control of GCN4: an in vivo barometer of initiation-factor activity. Trends Biochem. Sci. 19, 409-414.
    • (1994) Trends Biochem. Sci. , vol.19 , pp. 409-414
    • Hinnebusch, A.G.1
  • 5
    • 0019605658 scopus 로고
    • Conformational studies of Escherichia coli ribosomes with the use of acridine orange as a probe
    • Horie, K., Wada, A. & Fukutome, H. (1981) Conformational studies of Escherichia coli ribosomes with the use of acridine orange as a probe. J. Biochem. 90, 449-461.
    • (1981) J. Biochem. , vol.90 , pp. 449-461
    • Horie, K.1    Wada, A.2    Fukutome, H.3
  • 6
    • 0030774720 scopus 로고    scopus 로고
    • Prediction of protein secondary structure using the 3D-1D compatibility algorithm
    • Ito, M., Matsuo, Y, & Nishikawa, K. (1997) Prediction of protein secondary structure using the 3D-1D compatibility algorithm. Comput. Appl. Biosci. 13, 415-424.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 415-424
    • Ito, M.1    Matsuo, Y.2    Nishikawa, K.3
  • 7
    • 0034859791 scopus 로고    scopus 로고
    • Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp
    • Izutsu, K., Wada, A. & Wada, C. (2001a) Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp. Genes Cells 6, 665-676.
    • (2001) Genes Cells , vol.6 , pp. 665-676
    • Izutsu, K.1    Wada, A.2    Wada, C.3
  • 8
    • 0035053696 scopus 로고    scopus 로고
    • Escherichia coli ribosome-associated protein SRA, whose copy number increases during stationary phase
    • Izutsu, K., Wada, C., Komine, Y, et al. (2001b) Escherichia coli ribosome-associated protein SRA, whose copy number increases during stationary phase. J. Bacteriol. 183, 2765-2773.
    • (2001) J. Bacteriol. , vol.183 , pp. 2765-2773
    • Izutsu, K.1    Wada, C.2    Komine, Y.3
  • 9
    • 0034489577 scopus 로고    scopus 로고
    • Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli
    • Maki, Y., Yoshida, H. & Wada, A. (2000) Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli. Genes Cells 5, 965-974.
    • (2000) Genes Cells , vol.5 , pp. 965-974
    • Maki, Y.1    Yoshida, H.2    Wada, A.3
  • 10
    • 0028215997 scopus 로고
    • Continued functioning of the secretory pathway is essential for ribosome synthesis
    • Mizuta, K. & Warner, J.R. (1994) Continued functioning of the secretory pathway is essential for ribosome synthesis. Mol. Cell. Biol. 14, 2493-2502.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 2493-2502
    • Mizuta, K.1    Warner, J.R.2
  • 11
    • 0022916242 scopus 로고
    • Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes
    • Moazed, D. & Noller, H.F. (1986) Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes. Cell 47, 985-994.
    • (1986) Cell , vol.47 , pp. 985-994
    • Moazed, D.1    Noller, H.F.2
  • 12
    • 0034637161 scopus 로고    scopus 로고
    • The structural basis of ribosome activity in peptide bond synthesis
    • Nissen, P., Hansen, J., Ban, N., Moore, P.B. & Steitz, TA. (2000) The structural basis of ribosome activity in peptide bond synthesis. Science 289, 920-930.
    • (2000) Science , vol.289 , pp. 920-930
    • Nissen, P.1    Hansen, J.2    Ban, N.3    Moore, P.B.4    Steitz, T.A.5
  • 13
    • 0015914803 scopus 로고
    • Structural dynamics of bacterial ribosomes. 1. Characterization of vacant couples and their relation to complexed ribosomes
    • Noll, M., Hapke, B., Schreier, M.H.K. & Noll, H. (1973) Structural dynamics of bacterial ribosomes. 1. Characterization of vacant couples and their relation to complexed ribosomes. J. Mol. Biol. 75, 281-294.
    • (1973) J. Mol. Biol. , vol.75 , pp. 281-294
    • Noll, M.1    Hapke, B.2    Schreier, M.H.K.3    Noll, H.4
  • 14
    • 0035950132 scopus 로고    scopus 로고
    • Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria
    • Schlünzen, F., Zarivach, R., Harms, J., et al. (2001) Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria. Nature 413, 814-821.
    • (2001) Nature , vol.413 , pp. 814-821
    • Schlünzen, F.1    Zarivach, R.2    Harms, J.3
  • 15
    • 0036177483 scopus 로고    scopus 로고
    • A pretranslocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits
    • Schmeing, T.M., Seila, A.C., Hansen, J.L., et al. (2002) A pretranslocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits. Nature Struct. Biol. 9, 225-230.
    • (2002) Nature Struct. Biol. , vol.9 , pp. 225-230
    • Schmeing, T.M.1    Seila, A.C.2    Hansen, J.L.3
  • 16
    • 77049313195 scopus 로고
    • Acetylornithinase of Escherichia coli: Partial purification and some properties
    • Vogel, H.J. & Bonner, D.M. (1956) Acetylornithinase of Escherichia coli: partial purification and some properties. J. Biol. Chem. 218, 97-106.
    • (1956) J. Biol. Chem. , vol.218 , pp. 97-106
    • Vogel, H.J.1    Bonner, D.M.2
  • 17
    • 0031925720 scopus 로고    scopus 로고
    • Growth phase coupled modulation of Escherichia coli ribosomes
    • Wada, A. (1998) Growth phase coupled modulation of Escherichia coli ribosomes. Genes Cells 3, 203-208.
    • (1998) Genes Cells , vol.3 , pp. 203-208
    • Wada, A.1
  • 18
    • 0029059640 scopus 로고
    • Ribosome modulation factor: Stationary growth phase-specific inhibitor of ribosome functions from Escherichia coli
    • Wada, A., Igarashi, K., Yoshimura, S., Aimoto: S. & Ishihama, A. (1995) Ribosome modulation factor: Stationary growth phase-specific inhibitor of ribosome functions from Escherichia coli. Biochem. Biophys. Res. Commun. 214, 410-417.
    • (1995) Biochem. Biophys. Res. Commun. , vol.214 , pp. 410-417
    • Wada, A.1    Igarashi, K.2    Yoshimura, S.3    Aimoto, S.4    Ishihama, A.5
  • 19
    • 0025304290 scopus 로고
    • Structure and probable genetic location of a 'ribosome modulation factor' associated with 100S ribosomes in stationary-phase Escherichia coli cells
    • Wada, A., Yamazaki, Y., Fujita, N. & Ishihama, A. (1990) Structure and probable genetic location of a 'ribosome modulation factor' associated with 100S ribosomes in stationary-phase Escherichia coli cells. Proc. Natl. Acad. Sci. USA 87, 2657-2661.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2657-2661
    • Wada, A.1    Yamazaki, Y.2    Fujita, N.3    Ishihama, A.4
  • 20
    • 0035999670 scopus 로고    scopus 로고
    • Protein synthesis at atomic resolution: Mechanistics of translation in the light of highly resolved structures for the ribosome
    • Wilson, D.N., Blaha, G., Connell, S.R., et al. (2002) Protein synthesis at atomic resolution: Mechanistics of translation in the light of highly resolved structures for the ribosome. Curr. Protein Pept. Sci. 3, 1-53.
    • (2002) Curr. Protein Pept. Sci. , vol.3 , pp. 1-53
    • Wilson, D.N.1    Blaha, G.2    Connell, S.R.3
  • 21
    • 0027463636 scopus 로고
    • Regulation of the Escherichia coli rmf gene encoding the ribosome modulation factor: Growth phase- and growth rate-dependent control
    • Yamagishi, M., Matsushima, H., Wada, A., Sakagami, M., Fujita, N. & Ishihama, A. (1993) Regulation of the Escherichia coli rmf gene encoding the ribosome modulation factor: growth phase- and growth rate-dependent control. EMBO J. 12, 625-630.
    • (1993) EMBO J. , vol.12 , pp. 625-630
    • Yamagishi, M.1    Matsushima, H.2    Wada, A.3    Sakagami, M.4    Fujita, N.5    Ishihama, A.6
  • 22
    • 0036947369 scopus 로고    scopus 로고
    • The Ribosome Modulation Factor (RMF) Binding Site on the 100S Ribosome of Escherichia coli
    • Yoshida, H., Maki, Y., Kato, H., et al. (2002) The Ribosome Modulation Factor (RMF) Binding Site on the 100S Ribosome of Escherichia coli. J. Biochem. 132, 983-989.
    • (2002) J. Biochem. , vol.132 , pp. 983-989
    • Yoshida, H.1    Maki, Y.2    Kato, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.