Bayesian computer-aided experimental design of heterogeneous scaffolds for tissue engineering

CAD Computer Aided Design

Volumn 37, Issue 11, 2005, Pages 1127-1139

  Weiss, L E ^a   Amon, C H ^a   Finger, S ^a   Miller, E D ^a   Romero, D ^a   Verdinelli, I ^a   Walker, L M ^a   Campbell, P G ^a  

^a CARNEGIE MELLON UNIVERSITY   (United States)

Author keywords

Bayesian modeling; Heterogeneous designs; Solid freeform fabrication; Tissue engineering

Indexed keywords

BIOMEDICAL ENGINEERING; GROWTH KINETICS; LAYERED MANUFACTURING; MATHEMATICAL MODELS; MICROSTRUCTURE; OPTIMIZATION; TISSUE;

BAYESIAN MODELING; CRITICAL SIZED DEFECT (CSD); GROWTH FACTORS; TISSUE ENGINEERING;

COMPUTER AIDED DESIGN;

EID: 19044378183     PISSN: 00104485     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cad.2005.02.004     Document Type: Article

References (72)

1. J.O. Hollinger, and J.C. Kleinschmidt The critical size defect as an experimental model to test bone repair materials J Craniofac Surg 1 1990 60 68
2. J.P. Schmitz, and J.O. Hollinger The critical size defect as an experimental model for craniomandibulofacial nonunions Clin Ortho Rel Res 205 1986 299 308
3. L. Weiss Process overview, Analytical chapters NSF sponsored JTEC/WTEC panel report on rapid prototyping in Europe and Japan International Technology Research Institute at Loyla College 1997 5 20
4. S.S. Kim, H. Utsunomiya, J.A. Koski, B.M. Wu, M.J. Cima, J. Sohn, K. Mukai, L.G. Griffith, and J.P. Vacanti Survival and function of hepatocytes on a novel three-dimensional synthetic biodegradable polymer scaffold with an intrinsic network of channel Ann Surg 228 1998 8 13
5. R.A. Levy, T.M. Chu, J.W. Halloran, S.E. Feinberg, and S. Hollister CT-generated porous hydroxyapatite orbital floor prosthesis as a prototype bioimplant AJNR Am J Neuroradiol 18 1997 1522 1525
6. F. Wang, L. Shor, A. Darling, S. Khalil, W. Sun, S. Guceri, and A. Lau Precision extruding deposition and characterization of cellular poly-e-caprolactone tissue scaffolds In Solid freeform fabrication symposium, (Austin, Texas 2003 573 584
7. A.M. Kachurin, R.L. Stewart, K.H. Church, W.L. Warren, J.P. Fischer, A.G. Mikos, S. Kraeft, and L. Chen Direct-write construction of tissue-engineered scaffolds Mater Res Symp 2002 Materials Research Society
8. S. Das, S.J. Hollister, C. Flanagan, A. Adewunmi, K. Bark, C. Chen, K. Ramaswamy, D. Rose, and E. Widjaja Computational design, freeform fabrication and testing of nylon-6 tissue engineering scaffolds In solid freeform fabrication symposium 2002 University of Texas Auting p. 9-16
9. M.N. Cooke, J.P. Fisher, D. Dean, C. Rimnac, and A.G. Mikos Use of stereolithography to manufacture critical-sized 3D biodegradable scaffolds for bone ingrowth J Biomed Mater Res 64B 2003 65 69
10. G. Vozzi, M.S. Previti, D. De Rossi, and A. Ahluwalia Microsyringe-based deposition of two-dimensional and three-dimensional polymer scaffolds with a well-defined geometry for application to tissue engineering Tissue Eng 8 2003 1089 1098
11. I. Cornejo, T.F. McNulty, S. Lee, E. Bianchi, K. Tenhuisen, V. Janas, S. Danfroth, and A. Safari Development of bioceramic tissue scaffolds via FDC Ceramic Trans 110 2000 183 195
12. I. Zein, D.W. Hutmacher, K.C. Tan, and S.H. Teoh Fused deposition modeling of novel scaffold architectures for tissue engineering applications Biomaterials 23 2002 1169 1185
13. S.L. Morissette, J.A. Lewis, J. Cesarano, D. Dimos, and T. Baer Solid freeform fabrication of aqueous alumina-poly(vinyl alcohol) gel casting suspensions J Am Ceram Soc 83 2000 2409 2416
14. G. Lee, and J.W. Barlow Selective laser sintering of bioceramic materials of implants In solid freeform fabrication symposium 1993 University of Texas Austin (p. 376-80)
15. G. Lee, and J. Barlow Selective laser sintering of calcium phosphate powders In Solid freeform fabrication symposium 1994 (The University of Texas at Austin), pp. 191-7
16. K.F. Leong, K.K. Phua, C.K. Chua, Z.H. Du, and K.O. Teo Fabrication of porous polymeric matrix drug delivery devices using the selective laser sintering technique Proc Inst Mech Eng, [H] 215 2001 191 201
17. L. Weiss, and J. Szem Assembled scaffolds for three dimensional cell culture and tissue regeneration Patent no. 6,143,293 2000 Carnegie Mellon and University of Pittsburgh USA
18. L. Weiss, and F. Prinz Novel applications and implementations of shape deposition manufacturing 1998 Office of Naval Research L(3)
19. L. Weiss, R. Merz, F. Prinz, G. Neplotnik, P. Padmanabhan, L. Schultz, and K. Ramaswami Shape deposition manufacturing of heterogeneous structures SME J Manuf Syst 16 1997 239 248
20. L. Weiss NSF workshop on design methodologies for solid freeform fabrication 1995 Carnegie Mellon University Pittsburgh, PA NSF 96-216
21. L. Weiss Tissue engineering: solid freeform fabrication of scaffolds Sci Med 8 2002 6 7
22. M. Cima, E. Sachs, L. Cima, J. Yoo, S. Khanuja, S. Borland, B. Wu, and R. Giordano Computer-derived microstructures by 3D Solid freeform fabrication symposium 1994 (The University of Texas at Austin), p. 181-190
23. W.C. Wilson Jr, and T. Boland Cell and organ printing 1: protein and cell printers Anat Rec 272A 2003 491 496
24. V. Mironov, T. Boland, T. Trusk, G. Forgacs, and R.R. Markwald Organ printing: computer-aided jet-based 3D tissue engineering Trends Biotechnol 21 2003 157 161
25. T. Boland, V. Mironov, A. Gutowska, E.A. Roth, and R.R. Markwald Cell and organ printing 2: fusion of cell aggregates in three-dimensional gels Anat Rec 272A 2003 497 502
26. B.R. Ringeisen, H. Kim, H.D. Young, B.J. Spargo, and R.C.Y. Auyeung Cell-by-cell construction of living tissue Mat Res Symp 2002 Materials Research Society
27. G.J. Marquez, M.J. Renn, and W.D. Miller Aerosol-based direct-write of biological materials for biomedical applications Mat Res Soc Symp Proc 2002 Materials Research Society
28. J. Pitts, P. Campagnola, G. Epling, and S. Goodman Submicron multiphoton free-form fabrication of proteins and polymers: studies of reaction efficiencies and applications in sustained release Macromolecules 33 2000 1514 1523
29. R.J. Klebe Cytoscribing: a method for micropositioning of cells and the construction of two- and three-dimensional synthetic tissues Exp Cell Res 179 1988 362 373
30. R.J. Klebe Apparatus for the precise positioning of cells Patent no. 5,108,926 1992
31. W. Sun, A. Darling, B. Starly, and J. Nam Computer aided tissue engineering, part I: overview, scope, challenges J Biotechnol Appl Biochem 39 2004 29 47
32. W. Sun, B. Starly, A. Darling, and C. Gomez Computer aided tissue engineering, part II: application to biomimetic modeling and design of tissue scaffolds J Biotechnol Appl Biochem 39 2004 49 58
33. R. Jin, W. Chen, and T.W. Simpson Comparative studies of metamodeling techniques under multiple modeling criteria Struct multidisciplinary optimization 23 2001 1 13
34. T.W. Simpson, J.D. Peplinski, P.N. Koch, and J.K. Allen Metamodels for computer-based engineering design: survey and recommendations Eng Comput 17 2001 129 150
35. I.G. Osio, and C.H. Amon An engineering design methodology with multistage Bayesian surrogates and optimal sampling Res Eng Des 8 1996 189 206
36. C.H. Amon, and S. Finger Combining experimental and statistical methods for quality improvement of microcasting in shape deposition manufacturing Proceedings of the 1998 NSF design and manufacturing grantees conference 1998 Monterrey Mexico
37. J.E. Pacheco, C.H. Amon, and S. Finger Flexible multistage Bayesian models for use in conceptual design Fourteenth international ASME conference on design theory and methodology 2002 Montreal Canada
38. N. Leoni, and C.H. Amon Bayesian surrogates for integrating numerical, analytical and experimental data: application to inverse heat transfer in wearable computers IEEE transactions on components and packaging technol 23 2000 23 32
39. S. Doraiswamy, and S. Bayesian Bayesian analysis in engineering model assessment ASME design engineering technical conferences 2000 Baltimore MD
40. H.J. Clarke, R.H. Jinnah, and D. Lennox Osteointegration of bone graft in porous-coated total hip arthroplasty Clin Orthop Rel Res 258 1990 160 167
41. D.B. Rifkin, R. Mazzieri, J.S. Munger, I. Noguera, and J. Sung Proteolytic control of growth factor availability Apmis 107 1999 80 85
42. P.G. Campbell, K. Wines, T.B. Yanosick, and J.F. Novak Binding and activation of plasminogen on the surface of osteosarcoma cells J Cell Physiol 159 1994 1 10
43. J.S. Wang Basic fibroblast growth factor for stimulation of bone formation in osteoinductive or conductive implants Acta Orthop Scand l269 1996 1 33
44. J. Wang, and P. Aspenberg Basic fibroblast growth factor enhances bone-graft incorporation: dose and time dependence in rats J Orthop Res 34 1996 316 323
45. S.R. Winn, J.M. Schmitt, D. Buck, Y. Hu, D. Grainger, and J.O. Hollinger A tissue engineered bone biomimetic to regenerate calvarial critical-sized defects in athymic rats J Biomed Mater Res 45 1999 414 421
46. W. Bensaid, J.T. Triffitt, C. Blanchat, K. Oudina, L. Sedel, and H. Petite A biodegradable fibrin scaffold for mesenchymal stem cell transplantation Biomaterials 24 2003 2497 2502
47. A. Bikfalvi, S. Klein, G. Pintucci, and D.B. Rifkin Biological roles of fibroblast growth factor-2 Endocr Rev 18 1997 26 45
48. J.S. Wang, and P. Aspenberg Basic fibroblast growth factor infused at different times during bone graft incorporation. Titanium chamber study in rats Acta. Orthop. Scand. 67 1996 229 236
49. T. Tabata Genetics of morphogen gradients Nat Rev Genet 2 2001 620 630
50. T.A. Einhorn C.T. Brighton G.E. Freidlaender J.M. Lane Enhancement of fracture healing by molecular or physical means: an overview Bone formation and repair 1994 AAOS Rosemont, IL
51. W.M. Saltzman, and W.L. Olbreicht Building drug delivery into tissue engineering Nat Rev Drug Discovery 1 2002 177 186
52. S.E. Sakiyama, J.C. Schense, and J.A. Hubbell Incorporation of heparin-binding peptides into fibrin gels enhances neurite extension: an example of designer matrices in tissue engineering FASEB J 13 1999 2214 2224
53. T.P. Richardson, M.C. Peters, A.B. Ennett, and D.J. Mooney Polymeric system for dual growth factor delivery Nat Biotechnol 19 2001 1029 1034
54. C. Bosch, B. Melsen, and K. Vargervik Guided bone regeneration in calvarial bone defects using polytetrafluoroethylene membranes Cleft Palate Craniofac J 32 1995 311 317
55. J. Wang, and M.J. Glimcher Characterization of matrix-induced osteogenesis in rat calvarial bone defects: origins of bone-forming cells Calcif Tissue Int 65 1999 486 493
56. R.A. Clark Fibrin wound healing Ann N Y Acad Sci 936 2001 355 367
57. J.M. Wozney The potential role of bone morphogenetic proteins in periodontal reconstruction J Periodontol 66 1995 506 510
58. M.W. Mosesson The assembly and structure of the fibrin clot Nouv Rev Fr Hematol 34 1992 11 16
59. A. Sahni, T. Odrljin, and C.W. Francis Binding of basic fibroblast growth factor to fibrinogen and fibrin J Biol Chem 273 1998 7554 7559
60. S. Jockenhoevel, G. Zund, S.P. Hoerstrup, K. Chalabi, J.S. Sachweh, L. Demircan, B.J. Messmer, and M. Turina Fibrin gel - advantages of a new scaffold in cardiovascular tissue engineering Eur J Cardiothorac Surg 19 2001 424 430
61. C.B. Herbert, C. Nagaswami, G.D. Bittner, J.A. Hubbell, and J.W. Weisel Effects of fibrin micromorphology on neurite growth from dorsal root ganglia cultured in three-dimensional fibrin gels J Biomed Mater Res 40 1998 551 559
62. D.V. Lindley Bayesian statistics - a review 1972 SIAM ed. Philadelphia
63. J.E. Pacheco, C.H. Amon, S. Finger, J.E. Pacheco, C. Amon, and S. Finger Bayesian surrogates applied to conceptual stages of the engineering design process ASME J Mech Des 125 2003 664 672
64. Leoni N. Integrating information sources into global models: a surrogate methodology for product and process development Mechanical Engineering, PhD Thesis, Carnegie Mellon University, Pittsburgh, PA; 1999.
65. J.E. Pacheco, C.H. Amon, and S. Finger Developing Bayesian surrogates for use in preliminary design ASME design engineering technical conference, theory and methodology 2001
66. Pacheco JE. A methodology for surrogate model building in the engineering design process. PhD Thesis, Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, USA; 2003.
67. J.E. Pacheco, C.H. Amon, and S. Finger Incorporating information from replications into Bayesian surrogate models ASME international design engineering technical conferences 2003
68. D. Romero, C.H. Amon, S. Finger, and I. Verdinelli Multi-stage Bayesian surrogates for the design of time-dependent systems ASME 2004 international design engineering technical conferences 2004 American Society of Mechanical Engineers (ASME) Salt Lake City, USA
69. E.J. Battegay, E.W. Raines, R.A. Seifert, D.F. Bowen-Pope, and R. Ross TGF-beta induces bimodal proliferation of connective tissue cells via complex control of an autocrine PDGF loop Cell 63 1990 515 524
70. A.R. Poynton, and J.M. Lane Safety profile for the clinical use of bone morphogenetic proteins in the spine Spine 27 1 2002 S40 S48
71. A.B. Owen Orthogonal arrays for computer experiments, integration and visualization Statistica Sinica 2 1992 439 452
72. M.C. Shewry, and H.P. Wynn Maximum entropy sampling J Appl Stat 14 1987 165 170