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Volumn 21, Issue 9, 2005, Pages 1995-2000

Evaluation of the gene-specific dye bias in cDNA microarray experiments

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

EID: 18744378315     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti302     Document Type: Article
Times cited : (62)

References (18)
  • 1
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini,Y. and Hochberg,Y. (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. B, 57, 299-300.
    • (1995) J. R. Stat. Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 2
    • 0037177625 scopus 로고    scopus 로고
    • Generic dissection of transcriptional regulation in budding yeast
    • Brem,R. et al. (2002) Generic dissection of transcriptional regulation in budding yeast. Science, 296, 752-755.
    • (2002) Science , vol.296 , pp. 752-755
    • Brem, R.1
  • 3
    • 0036900895 scopus 로고    scopus 로고
    • Fundamentals of experimental designs for cDNA microarray
    • Churchill,G. (2002) Fundamentals of experimental designs for cDNA microarray. Nat. Genet., 32, 490-495.
    • (2002) Nat. Genet. , vol.32 , pp. 490-495
    • Churchill, G.1
  • 4
    • 2542491957 scopus 로고    scopus 로고
    • Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation
    • Comander,J. et al. (2004) Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation. BMC Genomics, 5, 17.
    • (2004) BMC Genomics , vol.5 , pp. 17
    • Comander, J.1
  • 5
    • 0037252603 scopus 로고    scopus 로고
    • CATMA: A complete Arabidopsis GST database
    • Crowe,M. et al. (2003) CATMA: a complete Arabidopsis GST database. Nucleic Acids Res., 31, 156-158.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 156-158
    • Crowe, M.1
  • 6
    • 14644429669 scopus 로고    scopus 로고
    • Varmixt: Efficient variance modelling for the differential analysis of replicated gene expression data
    • Delmar,P. et al. (2004) Varmixt: efficient variance modelling for the differential analysis of replicated gene expression data. Bioinformatics, 21, 502-508.
    • (2004) Bioinformatics , vol.21 , pp. 502-508
    • Delmar, P.1
  • 7
    • 1342286802 scopus 로고    scopus 로고
    • Gene-specific dye bias in microarray reference designs
    • Dombkowski,A. et al. (2004) Gene-specific dye bias in microarray reference designs. FEBS Lett., 560, 120-124.
    • (2004) FEBS Lett. , vol.560 , pp. 120-124
    • Dombkowski, A.1
  • 8
    • 0036012367 scopus 로고    scopus 로고
    • Statistical analysis of a gene expression microarray experiment with replication
    • Kerr,M.K. et al. (2002) Statistical analysis of a gene expression microarray experiment with replication. Statist. Sin., 12, 203-217.
    • (2002) Statist. Sin. , vol.12 , pp. 203-217
    • Kerr, M.K.1
  • 9
    • 4043172772 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis
    • Lurin,C. et al. (2004) Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis. Plant Cell, 16, 2089-2103.
    • (2004) Plant Cell , vol.16 , pp. 2089-2103
    • Lurin, C.1
  • 10
    • 2942542846 scopus 로고    scopus 로고
    • Spotting effect in microarray experiments
    • Mary-Huard,T. et al. (2004) Spotting effect in microarray experiments. BMC Bioinformatics, 5, 63.
    • (2004) BMC Bioinformatics , vol.5 , pp. 63
    • Mary-Huard, T.1
  • 11
    • 0030560897 scopus 로고    scopus 로고
    • Antisense RNA amplification: A linear amplification method for analysing the mRNA population from single living cells
    • Phillips,J. and Eberwine,J.H. (1996) Antisense RNA amplification: a linear amplification method for analysing the mRNA population from single living cells. Methods, 10, 283-288.
    • (1996) Methods , vol.10 , pp. 283-288
    • Phillips, J.1    Eberwine, J.H.2
  • 12
    • 0035818559 scopus 로고    scopus 로고
    • Project normal: Defining normal variance in mouse gene expression
    • Pritchard,C. et al. (2001) Project normal: defining normal variance in mouse gene expression. Proc. Natl Acad. Sci. USA, 98, 13266-13271.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 13266-13271
    • Pritchard, C.1
  • 13
    • 1542271926 scopus 로고    scopus 로고
    • Dye-bias correction in dual-labeled cDNA microarray gene expression measurements
    • Rosenzweig,B. et al. (2004) Dye-bias correction in dual-labeled cDNA microarray gene expression measurements. Environ. Health Perspect. 112, 480-487.
    • (2004) Environ. Health Perspect. , vol.112 , pp. 480-487
    • Rosenzweig, B.1
  • 14
    • 0442289601 scopus 로고    scopus 로고
    • A common reference for cDNA microarray hybridizations
    • Sterrenburg,E. et al. (2002) A common reference for cDNA microarray hybridizations. Nucleic Acids Res., 30, e116.
    • (2002) Nucleic Acids Res. , vol.30
    • Sterrenburg, E.1
  • 15
    • 0035875553 scopus 로고    scopus 로고
    • Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
    • Tseng,G. et al. (2001) Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res., 29, 2549-2557.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2549-2557
    • Tseng, G.1
  • 16
    • 0034006464 scopus 로고    scopus 로고
    • High-fidelity amplification for gene profiling
    • Wang,E. et al. (2000) High-fidelity amplification for gene profiling. Nat. Biotechnol., 18, 457-459.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 457-459
    • Wang, E.1
  • 17
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang,Y. et al. (2002) Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, e15.
    • (2002) Nucleic Acids Res. , vol.30
    • Yang, Y.1
  • 18
    • 0035872073 scopus 로고    scopus 로고
    • An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression
    • Yue,H. et al. (2001) An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression. Nucleic Acids Res., 29, E41-1.
    • (2001) Nucleic Acids Res. , vol.29
    • Yue, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.