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Volumn 21, Issue 4, 2004, Pages 632-646

Differential Enzyme Targeting As an Evolutionary Adaptation to Herbivory in Carnivora

Author keywords

Alanine:glyoxylate aminotransferase; Dietary selection pressure; Mitochondria; Molecular adaptation; Peroxisomes; Protein targeting

Indexed keywords

ALANINE GLYOXYLATE AMINOTRANSFERASE; CELL DNA;

EID: 1842609703     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msh054     Document Type: Article
Times cited : (45)

References (37)
  • 1
    • 0032936412 scopus 로고    scopus 로고
    • Building large trees by combining phylogenetic information: A complete phylogeny of the extant Carnivora (Mammalia)
    • Bininda-Emonds, O. R. P., J. L. Gittleman, and A. Purvis. 1999. Building large trees by combining phylogenetic information: a complete phylogeny of the extant Carnivora (Mammalia). Biol. Rev. 74:143-175.
    • (1999) Biol. Rev. , vol.74 , pp. 143-175
    • Bininda-Emonds, O.R.P.1    Gittleman, J.L.2    Purvis, A.3
  • 2
    • 0032055790 scopus 로고    scopus 로고
    • Evolution of alanine:glyoxylate aminotransferase intracellular targeting. Structural and functional analysis of the guinea pig gene
    • Birdsey, G. M. and C. J. Danpure. 1998. Evolution of alanine:glyoxylate aminotransferase intracellular targeting. Structural and functional analysis of the guinea pig gene. Biochem. J. 331:49-60.
    • (1998) Biochem. J. , vol.331 , pp. 49-60
    • Birdsey, G.M.1    Danpure, C.J.2
  • 3
    • 0023787903 scopus 로고
    • Immunocytochemical localization of human hepatic alanine:glyoxylate aminotransferase in control subjects and patients with primary hyperoxaluria type 1
    • Cooper, P. J., C. J. Danpure, P. J. Wise, and K. M. Guttridge. 1988. Immunocytochemical localization of human hepatic alanine: glyoxylate aminotransferase in control subjects and patients with primary hyperoxaluria type 1. J. Histochem. Cytochem. 36:1285-1294.
    • (1988) J. Histochem. Cytochem. , vol.36 , pp. 1285-1294
    • Cooper, P.J.1    Danpure, C.J.2    Wise, P.J.3    Guttridge, K.M.4
  • 4
    • 0031127316 scopus 로고    scopus 로고
    • Variable peroxisomal and mitochondrial targeting of alanine:glyoxylate aminotransferase in mammalian evolution and disease
    • Danpure, C. J. 1997. Variable peroxisomal and mitochondrial targeting of alanine: glyoxylate aminotransferase in mammalian evolution and disease. Bioessays 19:317-326.
    • (1997) Bioessays , vol.19 , pp. 317-326
    • Danpure, C.J.1
  • 5
    • 0000144788 scopus 로고    scopus 로고
    • Primary hyperoxaluria
    • C. R. Scriver, A. L. Beaudet, W. S. Sly, D. Valle, B. Childs, K. W. Kinzler, and B. Vogelstein, eds. McGraw-Hill, New York
    • -. 2001. Primary hyperoxaluria. Pp. 3323-3367 in C. R. Scriver, A. L. Beaudet, W. S. Sly, D. Valle, B. Childs, K. W. Kinzler, and B. Vogelstein, eds. The molecular and metabolic bases of inherited disease. McGraw-Hill, New York.
    • (2001) The Molecular and Metabolic Bases of Inherited Disease , pp. 3323-3367
  • 6
    • 0024535978 scopus 로고
    • An enzyme trafficking defect in two patients with primary hyperoxaluria type 1: Peroxisomal alanine/glyoxylate amino-transferase rerouted to mitochondria
    • Danpure, C. J., P. J. Cooper, P. J. Wise, and P. R. Jennings. 1989. An enzyme trafficking defect in two patients with primary hyperoxaluria type 1: peroxisomal alanine/glyoxylate amino-transferase rerouted to mitochondria. J. Cell Biol. 108:1345-1352.
    • (1989) J. Cell Biol. , vol.108 , pp. 1345-1352
    • Danpure, C.J.1    Cooper, P.J.2    Wise, P.J.3    Jennings, P.R.4
  • 7
    • 0028071268 scopus 로고
    • Evolution of alanine:glyoxylate aminotransferase 1 peroxisomal and mitochondrial targeting: A survey of its subcellular distribution in the livers of various representatives of the classes Mammalia, Aves and Amphibia
    • Danpure, C. J., P. Fryer, P. R. Jennings, J. Allsop, S. Griffiths, and A. Cunningham. 1994. Evolution of alanine:glyoxylate aminotransferase 1 peroxisomal and mitochondrial targeting: a survey of its subcellular distribution in the livers of various representatives of the classes Mammalia, Aves and Amphibia. Eur. J. Cell Biol. 64:295-313.
    • (1994) Eur. J. Cell Biol. , vol.64 , pp. 295-313
    • Danpure, C.J.1    Fryer, P.2    Jennings, P.R.3    Allsop, J.4    Griffiths, S.5    Cunningham, A.6
  • 8
    • 0025602353 scopus 로고
    • Subcellular distribution of hepatic alanine:glyoxylate aminotransferase in various mammalian species
    • Danpure, C. J., K. M. Guttridge, P. Fryer, P. R. Jennings, J. Allsop, and P. E. Purdue. 1990. Subcellular distribution of hepatic alanine:glyoxylate aminotransferase in various mammalian species. J. Cell Sci. 97:669-678.
    • (1990) J. Cell Sci. , vol.97 , pp. 669-678
    • Danpure, C.J.1    Guttridge, K.M.2    Fryer, P.3    Jennings, P.R.4    Allsop, J.5    Purdue, P.E.6
  • 9
    • 0000712404 scopus 로고    scopus 로고
    • The primary hyperoxalurias
    • F. L. Coe, M. J. Favus, C. Y. Pak, J. H. Parks, and G. M. Preminger, eds. Lippincott-Raven, Philadelphia
    • Danpure, C. J. and L. H. Smith. 1996. The primary hyperoxalurias. Pp. 859-881 in F. L. Coe, M. J. Favus, C. Y. Pak, J. H. Parks, and G. M. Preminger, eds. Kidney stones: medical and surgical management. Lippincott-Raven, Philadelphia.
    • (1996) Kidney Stones: Medical and Surgical Management , pp. 859-881
    • Danpure, C.J.1    Smith, L.H.2
  • 10
    • 0033997957 scopus 로고    scopus 로고
    • Molecular adaptation of alanine:glyoxylate aminotransferase targeting in primates
    • Holbrook, J. D., G. M. Birdsey, Z. Yang, M. W. Bruford, and C. J. Danpure. 2000. Molecular adaptation of alanine:glyoxylate aminotransferase targeting in primates. Mol. Biol. Evol. 17:387-400.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 387-400
    • Holbrook, J.D.1    Birdsey, G.M.2    Yang, Z.3    Bruford, M.W.4    Danpure, C.J.5
  • 11
    • 0031543885 scopus 로고    scopus 로고
    • Seasonal and habitat-related diets of sloth bears in Nepal
    • Joshi, A. R., D. L. Garshelis, and J. L. D. Smith. 1997. Seasonal and habitat-related diets of sloth bears in Nepal. J. Mammalogy 78:584-597.
    • (1997) J. Mammalogy , vol.78 , pp. 584-597
    • Joshi, A.R.1    Garshelis, D.L.2    Smith, J.L.D.3
  • 12
    • 0022552131 scopus 로고
    • Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes
    • Kozak, M. 1986. Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283-292.
    • (1986) Cell , vol.44 , pp. 283-292
    • Kozak, M.1
  • 13
    • 0024546509 scopus 로고
    • The scanning model for translation: An update
    • -. 1989. The scanning model for translation: an update. J. Cell Biol. 108:229-241.
    • (1989) J. Cell Biol. , vol.108 , pp. 229-241
  • 14
    • 0028940294 scopus 로고
    • Persistent measles virus infection of the intestine: Confirmation by immunogold electron microscopy
    • Lewin, J., A. P. Dhillon, R. Sim, G. Mazure, R. E. Pounder, and A. J. Wakefield. 1995. Persistent measles virus infection of the intestine: confirmation by immunogold electron microscopy. Gut 36:564-569.
    • (1995) Gut , vol.36 , pp. 564-569
    • Lewin, J.1    Dhillon, A.P.2    Sim, R.3    Mazure, G.4    Pounder, R.E.5    Wakefield, A.J.6
  • 15
    • 0033283169 scopus 로고    scopus 로고
    • The mouse alanine:glyoxylate aminotransferase gene (Agxt1): Cloning, expression, and mapping to chromosome 1
    • Li, X. M., E. C. Salido, and L. J. Shapiro. 1999. The mouse alanine:glyoxylate aminotransferase gene (Agxt1): cloning, expression, and mapping to chromosome 1. Somat. Cell Mol. Genet. 25:67-77.
    • (1999) Somat. Cell Mol. Genet. , vol.25 , pp. 67-77
    • Li, X.M.1    Salido, E.C.2    Shapiro, L.J.3
  • 16
    • 0033575214 scopus 로고    scopus 로고
    • Effect of N-terminal alpha helix formation on the dimerization and intracellular targeting of alanine:glyoxylate aminotransferase
    • Lumb, M. J., A. F. Drake, and C. J. Danpure. 1999. Effect of N-terminal alpha helix formation on the dimerization and intracellular targeting of alanine:glyoxylate aminotransferase. J. Biol. Chem. 274:20587-20596.
    • (1999) J. Biol. Chem. , vol.274 , pp. 20587-20596
    • Lumb, M.J.1    Drake, A.F.2    Danpure, C.J.3
  • 17
    • 0028175865 scopus 로고
    • Molecular evolution of alanine/glyoxylate aminotransferase 1 intracellular targeting: Analysis of the feline gene
    • Lumb, M. J., P. E. Purdue, and C. J. Danpure. 1994. Molecular evolution of alanine/glyoxylate aminotransferase 1 intracellular targeting: analysis of the feline gene. Eur. J. Biochem. 221:53-62.
    • (1994) Eur. J. Biochem. , vol.221 , pp. 53-62
    • Lumb, M.J.1    Purdue, P.E.2    Danpure, C.J.3
  • 18
    • 0031033277 scopus 로고    scopus 로고
    • Episodic adaptive evolution of primate lysozymes
    • Messier, W., and C. B. Stewart. 1997. Episodic adaptive evolution of primate lysozymes. Nature 385:151-154.
    • (1997) Nature , vol.385 , pp. 151-154
    • Messier, W.1    Stewart, C.B.2
  • 19
    • 0027237041 scopus 로고
    • Rapid amplification of genomic DNA ends
    • Mizobuchi, M., and L. A. Frohman. 1993. Rapid amplification of genomic DNA ends. Biotechniques 15:214-216.
    • (1993) Biotechniques , vol.15 , pp. 214-216
    • Mizobuchi, M.1    Frohman, L.A.2
  • 20
    • 0032972509 scopus 로고    scopus 로고
    • PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
    • Nakai, K., and P. Horton. 1999. PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization. Trends. Biochem. Sci. 24:34-36.
    • (1999) Trends. Biochem. Sci. , vol.24 , pp. 34-36
    • Nakai, K.1    Horton, P.2
  • 21
    • 0002316115 scopus 로고
    • Amino acid metabolism in animal peroxisomes
    • H. D. Fahimi and H. Sies, eds. Springer-Verlag, Berlin
    • Noguchi, T. 1987. Amino acid metabolism in animal peroxisomes. Pp. 234-243 in H. D. Fahimi and H. Sies, eds. Peroxisomes in biology and medicine. Springer-Verlag, Berlin.
    • (1987) Peroxisomes in Biology and Medicine , pp. 234-243
    • Noguchi, T.1
  • 23
    • 0029858734 scopus 로고    scopus 로고
    • Molecular basis of the variable mitochondrial and peroxisomal localization of alanine:glyoxylate aminotransferase
    • Oatey, P. B., M. J. Lumb, and C. J. Danpure. 1996. Molecular basis of the variable mitochondrial and peroxisomal localization of alanine:glyoxylate aminotransferase. Eur. J. Biochem. 241:374-385.
    • (1996) Eur. J. Biochem. , vol.241 , pp. 374-385
    • Oatey, P.B.1    Lumb, M.J.2    Danpure, C.J.3
  • 24
    • 0025320713 scopus 로고
    • Generation from a single gene of two mRNAs that encode the mitochondrial and peroxisomal serine:pyruvate aminotransferase of rat liver
    • Oda, T., T. Funai, and A. Ichiyama. 1990. Generation from a single gene of two mRNAs that encode the mitochondrial and peroxisomal serine:pyruvate aminotransferase of rat liver. J. Biol. Chem. 265:7513-7519.
    • (1990) J. Biol. Chem. , vol.265 , pp. 7513-7519
    • Oda, T.1    Funai, T.2    Ichiyama, A.3
  • 25
    • 0023642622 scopus 로고
    • Nucleotide sequence of the cDNA encoding the precursor for mitochondrial serine:pyruvate aminotransferase of rat liver
    • Oda, T., H. Miyajima, Y. Suzuki, and A. Ichiyama. 1987. Nucleotide sequence of the cDNA encoding the precursor for mitochondrial serine:pyruvate aminotransferase of rat liver. Eur. J. Biochem. 168:537-542.
    • (1987) Eur. J. Biochem. , vol.168 , pp. 537-542
    • Oda, T.1    Miyajima, H.2    Suzuki, Y.3    Ichiyama, A.4
  • 26
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic trees on personal computers
    • Page, R. D. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Appl. Biosci. 12:357-358.
    • (1996) Computer Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.1
  • 27
    • 0026724618 scopus 로고
    • Molecular evolution of alanine:glyoxylate aminotransferase 1 intracellular targeting: Analysis of the marmoset and rabbit genes
    • Purdue, P. E., M. J. Lumb, and C. J. Danpure. 1992. Molecular evolution of alanine:glyoxylate aminotransferase 1 intracellular targeting: analysis of the marmoset and rabbit genes. Eur. J. Biochem. 207:757-766.
    • (1992) Eur. J. Biochem. , vol.207 , pp. 757-766
    • Purdue, P.E.1    Lumb, M.J.2    Danpure, C.J.3
  • 29
    • 0023666025 scopus 로고
    • Adaptive evolution in the stomach lysozymes of foregut fermenters
    • Stewart, C. B., J. W. Schilling, and A. C. Wilson. 1987. Adaptive evolution in the stomach lysozymes of foregut fermenters. Nature 330:401-404.
    • (1987) Nature , vol.330 , pp. 401-404
    • Stewart, C.B.1    Schilling, J.W.2    Wilson, A.C.3
  • 30
    • 0025372539 scopus 로고
    • Human peroxisomal L-alanine:glyoxylate aminotransferase: Evolutionary loss of a mitochondrial targeting signal by point mutation of the initiation codon
    • Takada, Y., N. Kaneko, H. Esumi, P. E. Purdue, and C. J. Danpure. 1990. Human peroxisomal L-alanine: glyoxylate aminotransferase: evolutionary loss of a mitochondrial targeting signal by point mutation of the initiation codon. Biochem. J. 268:517-520.
    • (1990) Biochem. J. , vol.268 , pp. 517-520
    • Takada, Y.1    Kaneko, N.2    Esumi, H.3    Purdue, P.E.4    Danpure, C.J.5
  • 31
    • 0035891648 scopus 로고    scopus 로고
    • Establishment of a high throughput EST sequencing system using poly(A) tail-removed, cDNA libraries and determination of 36 000 bovine ESTs
    • Takasuga, A., S. Hirotsune, R. Itoh, A. Jitohzono, H. Suzuki, H. Aso, and Y. Sugimoto. 2001. Establishment of a high throughput EST sequencing system using poly(A) tail-removed, cDNA libraries and determination of 36 000 bovine ESTs. Nucleic Acids Res. 29: e108.
    • (2001) Nucleic Acids Res. , vol.29
    • Takasuga, A.1    Hirotsune, S.2    Itoh, R.3    Jitohzono, A.4    Suzuki, H.5    Aso, H.6    Sugimoto, Y.7
  • 33
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 0022731676 scopus 로고
    • Mitochondrial targeting sequences may form amphiphilic helices
    • von Heijne, G. 1986. Mitochondrial targeting sequences may form amphiphilic helices. EMBO J. 5:1335-1342.
    • (1986) EMBO J. , vol.5 , pp. 1335-1342
    • Von Heijne, G.1
  • 35
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. CABIOS 13:555-556.
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1
  • 36
    • 0031897964 scopus 로고    scopus 로고
    • Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
    • -. 1998. Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. Mol. Biol. Evol. 15:568-573.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 568-573
  • 37
    • 0028820333 scopus 로고
    • A new method of inference of ancestral nucleotide and amino acid sequences
    • Yang, Z., S. Kumar, and M. Nei. 1995. A new method of inference of ancestral nucleotide and amino acid sequences. Genetics 141:1641-1650.
    • (1995) Genetics , vol.141 , pp. 1641-1650
    • Yang, Z.1    Kumar, S.2    Nei, M.3


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