MDP1, a Saccharomyces cerevisiae gene involved in mitochondrial/cytoplasmic protein distribution, is identical to the ubiquitin-protein ligase gene RSP5

Genetics

Volumn 145, Issue 3, 1997, Pages 595-603

  Zoładek, Teresa ^a,b   Tobiasz, Anna ^b   Vaduva, Gabriela ^a   Boguta, Magda ^b   Martin, Nancy C ^c   Hopper, Anita K ^a  

^a PENN STATE MILTON S HERSHEY MEDICAL CENTER   (United States)

^b INSTITUTE OF BIOCHEMISTRY AND BIOPHYSICS   (Poland)

^c University of Louisville School of Medicine   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; TRANSFER RNA; UBIQUITIN PROTEIN LIGASE;

ARTICLE; CELLULAR DISTRIBUTION; CONTROLLED STUDY; CYTOSKELETON; DNA SEQUENCE; ENDOCYTOSIS; ENDOPLASMIC RETICULUM; GENE REPRESSION; MITOCHONDRION; NONHUMAN; PEROXISOME; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN SYNTHESIS; PROTEIN TARGETING; SACCHAROMYCES CEREVISIAE;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; CYTOPLASM; DNA, RECOMBINANT; ENDOCYTOSIS; FUNGAL PROTEINS; GENES, SUPPRESSOR; MITOCHONDRIA; MOLECULAR SEQUENCE DATA; MUTATION; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; UBIQUITIN-PROTEIN LIGASE COMPLEXES;

SACCHAROMYCES CEREVISIAE;

EID: 1842374437     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (57)

1. ALTSHUL, S. F., W. GISH, W. MILLER, E. W. MYERS and D. J. LIPMAN, 1990 Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
2. ANDRÉ, B., and J-Y. SPRINGAEL, 1994 WWP, a new amino acid motif present in single or multiple copies in various proteins including dystrophin and the SH3-binding Yes-associated protein YAP65. Biochem. Biophys. Res. Commun. 205: 1201-1205.
3. AZZI, A., D. BOSCOBOINIK and C. HANSEY, 1992 The protein kinase family. Eur. J. Biochem. 208: 547-557.
4. BORK, P., and M. SUDOL, 1994 The WW domain: a signaling site in dystrophin. Trends Biochem. Sci. 19: 531-533.
5. CARLSON, M., and D. BOTSTEIN, 1982 Two differentially regulated mRNAs with different 5′ ends encode secreted and intracellular forms of yeast invertase. Cell 28: 145-154.
6. CIECHANOVER, A., 1994 The ubiquitin-proteasome proteolytic pathway. Cell 79: 13-21.
7. CHEN, D.-C., B.-C. YANG and T. T. KUO, 1992 One-step transformation of yeast in stationary phase. Curr. Genet. 21: 83-84.
8. CHEN, H. I., and M. SUDOL, 1995 The WW domain of Yes-associated protein binds a proline-rich ligand that differs from the consensus established for Src homology 3-binding molecules. Proc. Natl. Acad. Sci. USA 92: 7819-7823.
9. CHEN, Z. J., L. PARENT and T. MANIATIS, 1996 Site-specific phosphorylation of IκBα by a novel ubiquitination-dependent protein kinase activity. Cell 84: 853-862.
10. 2+-dependent translocation domain with homology to PCK and GAP. Cell 65: 1043-1051.
11. CRANE, D. I., J. E. KALISH and S. J. GOULD, 1994 The Pichia Pastoris PAS4 gene encodes a ubiquitin-conjugating enzyme required for peroxisome assembly. J. Biol. Chem. 269: 21835-21844.
12. DIDONATO, J., F. MERCURIO, C. ROSETTE, J. WU-LI, H. SUYANG et al., 1996 Mapping of the inducible IκB phosphorylation sites that signal its ubiquitination and degradation. Mol. Cell. Biol. 16: 1295-1304.
13. DONNELLY, S. F. H., M. J. PICKLINGTON, D. PALLOTA and E. ORR, 1993 A proline rich protein, verprolin, involved in cytoskeletal organization and cellular growth in the yeast Saccharomyces cerevisiae. Mol. Microbiol. 10: 585-596.
14. DULIC, V., M. EGERTON, I. ELGUINDI, S. RATHS, B. SINGER et al., 1991 Yeast endocytosis assays. Methods Enzymol. 194: 697-710.
15. ECKER, D., J., M. I. KHAN, J. MARSCH, T. R. BUTT and S. T. CROOK, 1987 Chemical synthesis and expression of a cassette adapted ubiquitin gene. J. Biol. Chem. 262: 3524-3527.
16. EGNER, R., and K. KUCHLER, 1996 The yeast multidrug transporter Pdr5 of the plasma membrane is ubiquitinated prior to endocytosis and degradation in the vacuole. FEBS Lett. 378: 177-181.
17. EINBOND, A., and M. SUDOL, 1996 Towards prediction of cognate complexes between the WW domain and proline-rich ligands. FEBS Lett. 384: 1-8.
18. EISENMANN, D. M., K. M. ARNDT, S. L. RICUPERO, J. W. ROONEY and F. WINSTON, 1992 SPT3 interacts with TFIID to allow normal transcription in Saccharomyces cerevisiae. Genes Dev. 6: 1319-1331.
19. FINLEY, D., B. BARTEL and A. VARSHAVSKY, 1990 Synthesis of ribosomal proteins as ubiquitin fusions, pp. 636-644 in The Ribosome, edited by W. E. HILL, P. B. MOORE, A. DALBERG, D. SCHLESINGER, R. A. GARRETT et al. Am. Soc. Microbiol., Washington, DC.
20. FINLEY, D., 1992 The yeast ubiquitin system, pp. 539-581 in The Molecular and Cellular Biology of the Yeast Saccharomyces: Gene Expression, edited by E. W. JONES, J. R. PRINGLE and J. R. BROACH. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
21. GALAN, J. M. , C. VOLLAND, D. URBAN-GRIMAL and R. HAGUENAUER-TSAPIS, 1994 The yeast plasma membrane uracil permease is stabilized against stress induced degradation by a point mutation in a cycline-like "destruction box". Biochem. Biophys. Res. Commun. 201: 769-775.
22. GALAN, J. M., V. MOREAU, B. ANDRÉ, C. VOLLAND and R. HAGUENAUER-TSAPIS, 1996 Ubiquitination mediated by the Npi1p/Rsp5p ubiquitin-protein ligase is required for endocytosis of the yeast uracil permease. J. Biol. Chem. 271: 10946-10952.
23. HAUCKE, V., M. HORST, G. SCHATZ and T. LITGHOW, 1996 The Mas20p and Mas70p subunits of the protein import receptor of yeast mitochondria interact via the tetratricopeptide repeat motif in Mas20p: evidence for a single hetero-oligomeric receptor. EMBO J. 15: 1231-1238.
24. HEIN, C., J-Y SPRINGAEL, C. VOLLAND, R. HAGUENAUER-TSAPIS and B. ANDRÉ, 1995 NPI1, an essential yeast gene involved in induced degradation of Gap1 and Fur4 permeases, encodes the Rsp5 ubiquitin-protein ligase. Mol. Microbiol. 18: 77-87.
25. HICKE, L., and H. RIEZMAN, 1996 Ubiquitination of a yeast plasma membrane receptor signals its ligand-stimulated endocytosis. Cell 84: 277-287.
26. HOCHSTRASSER, M., 1996 Protein degradation or regulation: Ub the judge. Cell 84: 813-815.
27. HUIBREGTSE, J. M., M. SCHEFFNER, S. BEAUDENON and P. M. HOWLEY, 1995 A family of proteins structurally and functionally related to the E6-AP ubiquitin-protein ligase. Proc. Natl. Acad. Sci. USA 92: 2563-2567.
28. IRELAND, L. S., G. C. JOHNSTON, M. A. DEBROT, N. DHILLON, A. J. DEMAGGIO et al., 1994 A member of a novel family of yeast "Znfinger" proteins mediates the transition from stationary phase to cell proliferation. EMBO J. 13: 3812-3821.
29. JAUNIAUX, J. C., and M. GRENSON, 1990 GAP1, the general amino acid permease gene of Saccharomyces cerevisiae. Nucleotide sequence, protein similarity with other bakers yeast amino acids permeases, and nitrogen catabolite repression. Eur. J. Biochem. 164: 601-606.
30. JENTSCH S., 1992 The ubiquitin-conjugation system. Annu. Rev. Genet. 26: 179-207.
31. KÖLLING, R., and C. P. HOLLENBERG, 1994 The ABC-transporter Ste6 accumulates in the plasma membrane in a ubiquitinated form in endocytosis mutants. EMBO J. 13: 3261-3271.
32. KUMAR, S., Y. TOMOOKA and M. NODA 1992 Identification of a set of genes with developmentally down-regulated expression in the mouse brain. Biochem. Biophys. Res. Commun. 185: 1155-1161.
33. MCGRATH, J. P., S. JENTSH and A. VARSHAVSKY, 1991 UBA1: an essential yeast gene encoding ubiquitin-activating enzyme. EMBO J. 10: 227-236.
34. MARCHUK, D., DRUMM M., SAULINO A. and F. S. COLLINS, 1991 Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products, Nucleic Acids Res. 19: 1154.
35. MIHARA, K., and T. OMURA, 1996 Cytoplasmic chaperones in precursor targeting to mitochondria - the role of MSF and hsp70. Trends Cell Biol. 6: 104-108.
36. MUNN A. L., B. J. STEVENSON, M. I. GELI and H. RIEZMAN, 1995 end5, end6, and end7: mutations that cause actin delocalization and block the internalization step of endocytosis in Saccharomyces cerevisiae. Mol. Biol. Cell 6: 1721-1742.
37. NEFSKY, B., and D. BEACH, 1996 Pub1 acts as an E6-AP-like protein ubiquitin ligase in the degradation of cdc25. EMBO J. 15: 1301-1312.
38. ORR-WEAVER, T. L., J. W. SZOSTAK and R. J. ROTSTEIN 1981 Yeast transformation: a model system for the study of recombination. Proc. Natl. Acad. Sci. USA 78: 6354-6358.
39. ÖZKAYNAK E., D. FINLEY, M. J. SOLOMON and A. VARSHAVSKY, 1987 The yeast ubiquitin genes: a family of natural gene fusions. EMBO J. 6: 1429-1439.
40. PFANNER, N., M. G. DOUGLAS, T. ENDO, N. J. HOOGENRAAD, R. E. JENSEN et al., 1996 Uniform nomenclature for the protein transport machinery. Trends Biochem. Sci. 21: 51-52.
41. PRENDERGAST, J. A. , C. PTAK, T. G. ARNASON and M. J. ELLISON, 1995 Increased ubiquitin expression suppresses the cell cycle defect associated with the yeast ubiquitin conjugating enzyme, CDC34 (UBC3). Evidence for a noncovalent interaction between CDC34 and ubiquitin. Mol. Cell. Biol. 16: 677-684.
42. RILES, L., J. E. DUTCHIK, A, BAKTHA, B. K. MCCAULEY, E. C. THAYER et al., 1993 Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at the resolution of 2.6 kilobase pairs. Genetics 134: 81-150.
43. ROSE, M., D., P. NOVICK, J. H. THOMAS, D. BOTSTEIN and G. R. FINK, 1987 A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector. Gene 60: 237-243.
44. SACHS, A. B., and J. A. DEARDOFF, 1992 Translation initiation requires the PAB-dependent poly(A) ribonuclease in yeast. Cell 70: 961-973.
45. SAMBROOK, J., E. F. FRITSCH and T. MANIATIS, 1989 Molecular Cloning: a Laboratory Manual, Ed. 2. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
46. SHERMAN, F., 1991 Getting started with yeast. Methods Enzymol. 194: 3-21.
47. SHERMAN, F., G. R. FINK and J. B. HICKS, 1986 Laboratory Course Manual for Methods in Yeast Genetics. Cold Spring Harbor, New York.
48. SOMMER, T., and S. JENTSCH, 1993 A protein translocation defect linked to ubiquitin conjugation at the endoplasmic reticulum. Nature 365: 176-179.
49. STRUHL, K., D. T. STINCHCOMB and R. DAVIS, 1979 High frequency transformation of yeast: autonomous replication of hybrid DNA molecules. Proc. Natl. Acad. Sci. USA 76: 1035-1039.
50. TANG, H.-Y., and M. CAI, 1996 The EH-domain-containing protein Pan1 is required for normal organization of actin cytoskeleton in Saccharomyces cerevisiae. Mol. Cell. Biol. 16: 4897-4914.
51. TAUSSIG, R., and M. CARLSON, 1983 Nucleotide sequence of the yeast SUC2 gene for invertase. Nucleic Acids Res. 11: 1943-1954.
52. VERNER, K., and G. SCHATZ, 1988 Protein translocation across membranes. Science 241: 1307-1313.
53. VON HEIJNE, G., 1986 Mitochondrial targeting sequences may form amphiphilic helices. EMBO J. 5: 1335-1342.
54. WIEBEL, F. F., and W. H. KUNAU, 1992 The Pas2 protein essential for peroxisome biogenesis is related to ubiquitin-conjugating enzymes. Nature 359: 73-76.
55. ZHUANG, Z., and R. B. MCCAULEY, 1989 Ubiquitin is involved in the in vitro insertion of monoamino oxidase B into mitochondrial outer membranes. J. Biol. Chem. 264: 14594-14596.
56. ZHUANG, Z., B. MARKS and R. B. MCCAULEY, 1992 The insertion of monoamino oxidase A into the outer membrane of rat liver mitochondria. J. Biol. Chem. 267: 591-596.
57. ŻOŁADEK, T., G. VADUVA, L. A. HUNTER, M. BOGUTA, B. D. Go et al., 1995 Mutations altering the mitochondrial-cytoplasmic distribution of Mod5p implicate the actin cytoskeleton and mRNA 3′ ends and/or protein synthesis in mitochondrial delivery. Mol. Cell. Biol. 15: 6884-6894.