Identification of plasma membrane macro- and microdomains from wavelet analysis of FRET microscopy

Biophysical Journal

Volumn 88, Issue 5, 2005, Pages 3625-3634

  Kobrinsky, Evgeny ^a   Mager, Donald E ^a,c   Bentil, Sarah A ^a   Murata, Shin Ichi ^b   Abernethy, Darrell R ^a   Soldatov, Nikolai M ^a  

^a NATIONAL INSTITUTE ON AGING   (United States)

^b UNIVERSITY OF YAMANASHI   (Japan)

^c UNIVERSITY AT BUFFALO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLCHOLINE; ESTERASE INHIBITOR; PHORBOL DIBUTYRATE; PHOSPHATASE; PROTEIN KINASE C; PROTEIN KINASE C INHIBITOR;

ANIMAL CELL; ARTICLE; CELL MEMBRANE; CELL STRAIN COS1; CONTROLLED STUDY; ENZYME ACTIVITY; FLUORESCENCE RESONANCE ENERGY TRANSFER; GENE EXPRESSION; GENETIC TRANSFECTION; IMAGE ANALYSIS; MICROSCOPY; NONHUMAN; OPTICAL RESOLUTION; PROTEIN PHOSPHORYLATION; SIGNAL TRANSDUCTION;

EID: 17844368351     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.104.054056     Document Type: Article

References (24)

1. Aristizabal, F., and M. I. Glavinovic. 2003. Wavelet analysis of non-stationary fluctuations of Monte Carlo-simulated excitatory postsynaptic currents. Biophys. J. 85:2170-2185.
2. Arneodo, A., E. Bacry, P. V. Graves, and J. F. Muzy. 1995. Characterizing long-range correlations in DNA sequences from wavelet analysis. Phys. Rev. Lett. 74:3293-3296.
3. Braz, J. C., K. Gregory, A. Pathak, W. Zhao, B. Sahin, R. Klevitsky, T. F. Kimball, J. N. Lorenz, A. C. Nairn, S. B. Liggett, I. Bodi, S. Wang, A. Schwartz, E. G. Lakatta, A. A. DePaoli-Roach, J. Robbins, T. E. Hewett, J. A. Bibb, M. V. Westfall, E. G. Kranias, and J. D. Molkentin. 2004. PKC-α regulates cardiac contractility and propensity toward heart failure. Nat. Med. 10:248-254.
4. Haralick, R. M., K. Shanmugam, and I. Dinstein. 1973. Textural features for image classification. IEEE Trans. 3:610-621.
5. Kenworthy, A. K. 2001. Imaging protein-protein interactions using fluorescence resonance energy transfer microscopy. Methods. 24:289-296.
6. 2+ channel cytoplasmic tails and its regulatory role. J. Biol. Chem. 278:5021-5028.
7. 2+ channel inactivation. Biophys. J. 87:844-857.
8. Laine, A. F. 2000. Wavelets in temporal and spatial processing of biomedical images. Annu. Rev. Biomed. Eng. 02:511-550.
9. Maxfield, F. R. 2002. Plasma membrane microdomains. Curr. Opin. Cell Biol. 14:483-487.
10. Misiti, M., Y. Misiti, G. Oppenheim, and J. M. Poggi. 2000. Wavelet Toolbox User's Guide. The Math Works, Natick, MA.
11. Murata, S., P. Herman, and J. R. Lakowicz. 2001. Texture analysis of fluorescence lifetime images of nuclear DNA with effect of fluorescence resonance energy transfer. Cytometry. 43:94-100.
12. Murata, S., P. Herman, K. Mochizuki, T. Nakazawa, T. Kondo, N. Nakamura, J. R. Lakowicz, and R. Katoh. 2003. Spatial distribution analysis of AT- and GC-rich regions in nuclei using corrected fluorescence resonance energy transfer. J. Histochem. Cytochem. 51: 951-958.
13. Petersen, N. O., P. L. Hoddelius, P. W. Wiseman, O. Seger, and K. E. Magnusson. 1993. Quantitation of membrane receptor distributions by image correlation spectroscopy: concept and application. Biophys. J. 65:1135-1146.
14. Press, W. H., S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery. 1992. Numerical Recipes in FORTRAN, 2nd Ed. Cambridge University Press, New York.
15. Sharifi-Salamatian, V., B. Pesquet-Popescu, J. Simony-Lafontaine, and J. P. Rigaut. 2004. Index for spatial heterogeneity in breast cancer. J. Microsc. 216:110-122.
16. Sharma, P., R. Vanna, R. C. Sarasij, I. K. Gousset, G. Krishnamoorthy, M. Rao, and S. Mayor. 2004. Nanoscale organization of multiple GPI-anchored proteins in living cell membranes. Cell. 116:577-589.
17. Shirai, Y., and N. Saito. 2002. Activation mechanisms of protein kinase C: maturation, catalytic activation, and targeting. J. Biochem. (Tokyo). 132: 663-668.
18. Vermeer, J. E., E. B. Van Munster, N. O. Vischer, and T. W. Jr. Gadella. 2004. Probing plasma membrane microdomains in cowpea protoplasts using lipidated GFP-fusion proteins and multimode FRET microscopy. J. Microsc. 214:190-200.
19. Violin, J. D., J. Zhang, R. Y. Tsien, and A. C. Newton. 2003. A genetically encoded fluorescent reporter reveals oscillatory phosphorylation by protein kinase C. J. Cell Biol. 161:899-909.
20. Wallrabe, H., M. Elangovan, A. Burchard, A. Periasamy, and M. Barroso. 2003. Confocal FRET microscopy to measure clustering of ligand-receptor complexes in endocytic membranes. Biophys. J. 85:559-571.
21. Wiseman, P. W., C. M. Brown, D. J. Webb, B. Hebert, N. L. Johnson, J. A. Squier, M. H. Ellisman, and A. F. Horwitz. 2004. Spatial mapping of integrin interactions and dynamics during cell migration by image correlation microscopy. J. Cell Sci. 117:5521-5534.
22. Xia, Z., and Y. Liu. 2001. Reliable and global measurement of fluorescence resonance energy transfer using fluorescent microscopes. Biophys. J. 81: 2395-2402.
23. Zaccolo, M. 2004. Use of chimeric fluorescent proteins and fluorescence resonance energy transfer to monitor cellular responses. Circ. Res. 94: 866-873.
24. Zacharias, D. A., J. D. Violin, A. C. Newton, and R. Y. Tsien. 2002. Partitioning of lipid-modified monomeric GFPs into membrane micro-domains of live cells. Science. 296:913-916.