-
1
-
-
0035027728
-
Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature
-
Adam Z, Adamska I, Nakabayashi K, Ostersetzer O, Haussuhl K, Manuell A, Zheng B, Vallon O, Rodermel SR, Shinozaki K, Clarke AK (2001) Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. Plant Physiol 125: 1912-1918
-
(2001)
Plant Physiol
, vol.125
, pp. 1912-1918
-
-
Adam, Z.1
Adamska, I.2
Nakabayashi, K.3
Ostersetzer, O.4
Haussuhl, K.5
Manuell, A.6
Zheng, B.7
Vallon, O.8
Rodermel, S.R.9
Shinozaki, K.10
Clarke, A.K.11
-
2
-
-
0036776905
-
Cutting edge of chloroplast proteolysis
-
Adam Z, Clarke AK (2002) Cutting edge of chloroplast proteolysis. Trends Plant Sci 7: 451-456
-
(2002)
Trends Plant Sci
, vol.7
, pp. 451-456
-
-
Adam, Z.1
Clarke, A.K.2
-
4
-
-
0000040282
-
Photodamage and D1 protein turnover in photosystem II
-
Aro EM, Andersson B (eds) Kluwer Academic Publishers, Dordrecht, Boston, London
-
Andersson B, Aro EM (2001) Photodamage and D1 protein turnover in photosystem II. In: Aro EM, Andersson B (eds) Advances in Photosynthesis and Respiration - Regulation of Photosynthesis, Vol. 11. Kluwer Academic Publishers, Dordrecht, Boston, London, pp 377-393
-
(2001)
Advances in Photosynthesis and Respiration - Regulation of Photosynthesis
, vol.11
, pp. 377-393
-
-
Andersson, B.1
Aro, E.M.2
-
5
-
-
0037127195
-
A critical role for the Var2 FtsH homologue of Arabidopsis thaliana in the photosystem II repair cycle in vivo
-
Bailey S, Thompson E, Nixon PJ, Horton P, Mullineaux CW, Robinson C, Mann NH (2002) A critical role for the Var2 FtsH homologue of Arabidopsis thaliana in the photosystem II repair cycle in vivo. J Biol Chem 277: 2006-2011
-
(2002)
J Biol Chem
, vol.277
, pp. 2006-2011
-
-
Bailey, S.1
Thompson, E.2
Nixon, P.J.3
Horton, P.4
Mullineaux, C.W.5
Robinson, C.6
Mann, N.H.7
-
6
-
-
0036800801
-
Expression and characterization of the thylakoid lumen protease DegP1 from Arabidopsis
-
Chassin Y, Kapri-Pardes E, Sinvany G, Arad T, Adam Z (2002) Expression and characterization of the thylakoid lumen protease DegP1 from Arabidopsis. Plant Physiol 130: 857-864
-
(2002)
Plant Physiol
, vol.130
, pp. 857-864
-
-
Chassin, Y.1
Kapri-Pardes, E.2
Sinvany, G.3
Arad, T.4
Adam, Z.5
-
7
-
-
0036752926
-
The HtrA family of proteases: Implications for protein composition and cell fate
-
Clausen T, Southan C, Ehrmann M (2002) The HtrA family of proteases: implications for protein composition and cell fate. Mol Cell 10: 443-455
-
(2002)
Mol Cell
, vol.10
, pp. 443-455
-
-
Clausen, T.1
Southan, C.2
Ehrmann, M.3
-
8
-
-
0141842524
-
Distribution of the serine protease HtrA1 in normal human tissues
-
De Luca A, De Falco M, Severino A, Campioni M, Santini D, Baldi F, Paggi MG, Baldi A (2003) Distribution of the serine protease HtrA1 in normal human tissues. J Histochem Cytochem 51: 1279-1284
-
(2003)
J Histochem Cytochem
, vol.51
, pp. 1279-1284
-
-
De Luca, A.1
De Falco, M.2
Severino, A.3
Campioni, M.4
Santini, D.5
Baldi, F.6
Paggi, M.G.7
Baldi, A.8
-
9
-
-
0034697980
-
Predicting subcellular localization of proteins on their N-terminal amino acid sequence
-
Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins on their N-terminal amino acid sequence. J Mol Biol 300: 1005-1016
-
(2000)
J Mol Biol
, vol.300
, pp. 1005-1016
-
-
Emanuelsson, O.1
Nielsen, H.2
Brunak, S.3
Von Heijne, G.4
-
10
-
-
0035047106
-
Proteases and cellular regulation in plants
-
Estelle M (2001) Proteases and cellular regulation in plants. Curr Opin Plant Biol 3: 254-260
-
(2001)
Curr Opin Plant Biol
, vol.3
, pp. 254-260
-
-
Estelle, M.1
-
11
-
-
0033797930
-
Proteomics of Synechocystis sp. strain PCC 6803. Identification of periplasmic proteins in cells grown at low and high salt concentrations
-
Fulda S, Huang F, Nilsson F, Hagemann M, Norling B (2000) Proteomics of Synechocystis sp. strain PCC 6803. Identification of periplasmic proteins in cells grown at low and high salt concentrations. Eur J Biochem 267: 5900-5907
-
(2000)
Eur J Biochem
, vol.267
, pp. 5900-5907
-
-
Fulda, S.1
Huang, F.2
Nilsson, F.3
Hagemann, M.4
Norling, B.5
-
12
-
-
0011203683
-
Family of Deg/Htr proteases in the cyanobacterium Synechocystis sp. PCC6803: Investigations toward their expression and function
-
Larkum T, Critchley C (eds) CSIRO, Canberra
-
Funk C, Haussuhl K, Adamska I (2001) Family of Deg/Htr proteases in the cyanobacterium Synechocystis sp. PCC6803: investigations toward their expression and function. In: Larkum T, Critchley C (eds) PS2001 Proceedings of the 12th International Congress on Photosynthesis. CSIRO, Canberra, pp S8-042
-
(2001)
PS2001 Proceedings of the 12th International Congress on Photosynthesis
-
-
Funk, C.1
Haussuhl, K.2
Adamska, I.3
-
13
-
-
0035783236
-
Three-dimensional structure of the photosystem II core dimer of higher plants determined by electron microscopy
-
Hankamer B, Morris E, Nield J, Gerle C, Barber J (2001) Three-dimensional structure of the photosystem II core dimer of higher plants determined by electron microscopy. J Struct Biol 135: 262-269
-
(2001)
J Struct Biol
, vol.135
, pp. 262-269
-
-
Hankamer, B.1
Morris, E.2
Nield, J.3
Gerle, C.4
Barber, J.5
-
14
-
-
0001596491
-
A chloroplast DegP2 protease performs the primary cleavage of the photodamaged D1 protein in plant photosystem II
-
Haussuhl K, Andersson B, Adamska I (2001) A chloroplast DegP2 protease performs the primary cleavage of the photodamaged D1 protein in plant photosystem II. EMBO J 20: 713-722
-
(2001)
EMBO J
, vol.20
, pp. 713-722
-
-
Haussuhl, K.1
Andersson, B.2
Adamska, I.3
-
15
-
-
3042733909
-
Isolation of outer membrane of Synechocystis sp. PCC6803 and its proteomic characterization
-
Huang F, Hedman E, Funk C, Kieselbach T, Schroder WP, Norling B (2004) Isolation of outer membrane of Synechocystis sp. PCC6803 and its proteomic characterization. Mol Cell Proteomics 3: 586-595
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 586-595
-
-
Huang, F.1
Hedman, E.2
Funk, C.3
Kieselbach, T.4
Schroder, W.P.5
Norling, B.6
-
16
-
-
0032549650
-
Identification and characterization of DegP, a serine protease associated with the luminal side of the thylakoid membrane
-
Itzhaki H, Naveh L, Lindahl M, Cook M, Adam Z (1998) Identification and characterization of DegP, a serine protease associated with the luminal side of the thylakoid membrane. J Biol Chem 273: 7094-7098
-
(1998)
J Biol Chem
, vol.273
, pp. 7094-7098
-
-
Itzhaki, H.1
Naveh, L.2
Lindahl, M.3
Cook, M.4
Adam, Z.5
-
17
-
-
0345059200
-
Dissecting a cyanobacterial proteolytic system: Efficiency in inducing degradation of the D1 protein of photosystem II in cyanobacteria and plants
-
Kanervo E, Spetea C, Nishiyama Y, Murata N, Andersson B, Aro EM (2003) Dissecting a cyanobacterial proteolytic system: efficiency in inducing degradation of the D1 protein of photosystem II in cyanobacteria and plants. Biochim Biophys Acta 1607: 131-140
-
(2003)
Biochim Biophys Acta
, vol.1607
, pp. 131-140
-
-
Kanervo, E.1
Spetea, C.2
Nishiyama, Y.3
Murata, N.4
Andersson, B.5
Aro, E.M.6
-
18
-
-
0242277339
-
The family of Deg/HtrA proteases: From Escherichia coli to Arabidopsis
-
Kieselbach T, Funk C (2003) The family of Deg/HtrA proteases: from Escherichia coli to Arabidopsis. Physiol Plant 119: 337-346
-
(2003)
Physiol Plant
, vol.119
, pp. 337-346
-
-
Kieselbach, T.1
Funk, C.2
-
19
-
-
0037187588
-
Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine
-
Krojer T, Garrido-Franco M, Huber R, Ehrmann M, Clausen T (2002) Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine. Nature 416: 455-459
-
(2002)
Nature
, vol.416
, pp. 455-459
-
-
Krojer, T.1
Garrido-Franco, M.2
Huber, R.3
Ehrmann, M.4
Clausen, T.5
-
20
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17: 1244-1245
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
21
-
-
0036263973
-
Structural insights into the pro-apoptotic function of mitochondrial serine protease HtrA2/Omi
-
Li W, Srinivasula SM, Chai J, Li P, Wu JW, Zhang Z, Alnemri ES, Shi Y (2002) Structural insights into the pro-apoptotic function of mitochondrial serine protease HtrA2/Omi. Nat Struct Biol 9: 436-441
-
(2002)
Nat Struct Biol
, vol.9
, pp. 436-441
-
-
Li, W.1
Srinivasula, S.M.2
Chai, J.3
Li, P.4
Wu, J.W.5
Zhang, Z.6
Alnemri, E.S.7
Shi, Y.8
-
22
-
-
0034031132
-
The thylakoid FtsH protease plays a role in the light-induced turnover of the photosystem II, D1 protein
-
Lindahl M, Spetea C, Hundal T, Oppenheim AB, Adam Z, Andersson B (2000) The thylakoid FtsH protease plays a role in the light-induced turnover of the photosystem II, D1 protein. Plant Cell 12: 419-431
-
(2000)
Plant Cell
, vol.12
, pp. 419-431
-
-
Lindahl, M.1
Spetea, C.2
Hundal, T.3
Oppenheim, A.B.4
Adam, Z.5
Andersson, B.6
-
23
-
-
0036260673
-
Love it or leave it: Tough choices in protein quality control
-
Maurizi MR (2002) Love it or leave it: Tough choices in protein quality control. Nat Struct Biol 9: 410-412
-
(2002)
Nat Struct Biol
, vol.9
, pp. 410-412
-
-
Maurizi, M.R.1
-
24
-
-
0042473085
-
Degradation of the D1 protein of photosystem II under illumination in vivo: Two different pathways involving cleavage or intermolecular cross-linking
-
Mizusawa N, Tomo T, Satoh K, Miyao M (2003) Degradation of the D1 protein of photosystem II under illumination in vivo: two different pathways involving cleavage or intermolecular cross-linking. Biochemistry 42: 10 034-10 044
-
(2003)
Biochemistry
, vol.42
, pp. 10034-10044
-
-
Mizusawa, N.1
Tomo, T.2
Satoh, K.3
Miyao, M.4
-
25
-
-
0037394645
-
Identification and cloning of two isoforms of human high-temperature requirement factor A3 (HtrA3), characterization of its genomic structure and comparison of its tissue distribution with HtrA1 and HtrA2
-
Nie GY, Hampton A, Li Y, Findlay JK, Salamonsen LA (2003) Identification and cloning of two isoforms of human high-temperature requirement factor A3 (HtrA3), characterization of its genomic structure and comparison of its tissue distribution with HtrA1 and HtrA2. Biochem J 371: 39-48
-
(2003)
Biochem J
, vol.371
, pp. 39-48
-
-
Nie, G.Y.1
Hampton, A.2
Li, Y.3
Findlay, J.K.4
Salamonsen, L.A.5
-
26
-
-
0030614959
-
Identification of prokaryotic and eukaryotic peptides and prediction of their cleavage sites
-
Nielsen H, Engelbrecht J, Brunak S, von Heijne G (1997) Identification of prokaryotic and eukaryotic peptides and prediction of their cleavage sites. Prot Eng 10: 1-6
-
(1997)
Prot Eng
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
Von Heijne, G.4
-
27
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C, Higgins DG, Heringa J (2000) T-Coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol 302: 205-217
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
28
-
-
0030812638
-
The HtrA family of serine proteases
-
Pallen MJ, Wren BW (1997) The HtrA family of serine proteases. Mol Microbiol 26: 209-221
-
(1997)
Mol Microbiol
, vol.26
, pp. 209-221
-
-
Pallen, M.J.1
Wren, B.W.2
-
29
-
-
0036007922
-
Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction
-
Peltier JB, Emanuelsson O, Kalume DE, Ytterberg J, Friso G, Rudella A, Liberles DA, Soderberg L, Roepstorff P, von Heijne G, van Wijk KJ (2002) Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. Plant Cell 14: 211-236
-
(2002)
Plant Cell
, vol.14
, pp. 211-236
-
-
Peltier, J.B.1
Emanuelsson, O.2
Kalume, D.E.3
Ytterberg, J.4
Friso, G.5
Rudella, A.6
Liberles, D.A.7
Soderberg, L.8
Roepstorff, P.9
Von Heijne, G.10
Van Wijk, K.J.11
-
30
-
-
0347380954
-
Coordinated regulation and complex formation of yellow variegated1 and yellow variegated2, chloroplastic FtsH metalloproteases involved in the repair cycle of photosystem II in Arabidopsis thylakoid membranes
-
Sakamoto W, Zaltsman A, Adam Z, Takahashi Y (2003) Coordinated regulation and complex formation of yellow variegated1 and yellow variegated2, chloroplastic FtsH metalloproteases involved in the repair cycle of photosystem II in Arabidopsis thylakoid membranes. Plant Cell 15: 2843-2855
-
(2003)
Plant Cell
, vol.15
, pp. 2843-2855
-
-
Sakamoto, W.1
Zaltsman, A.2
Adam, Z.3
Takahashi, Y.4
-
31
-
-
0037040944
-
Proteome map of the chloroplast lumen of Arabidopsis thaliana
-
Schubert M, Petersson UA, Haas BJ, Funk C, Schroder WP, Kieselbach T (2002) Proteome map of the chloroplast lumen of Arabidopsis thaliana. J Biol Chem 277: 8354-8365
-
(2002)
J Biol Chem
, vol.277
, pp. 8354-8365
-
-
Schubert, M.1
Petersson, U.A.2
Haas, B.J.3
Funk, C.4
Schroder, W.P.5
Kieselbach, T.6
-
32
-
-
0034916230
-
PDZ domains and the organization of supramolecular complexes
-
Sheng M, Sala C (2001) PDZ domains and the organization of supramolecular complexes. Annu Rev Neurosci 24: 1-29
-
(2001)
Annu Rev Neurosci
, vol.24
, pp. 1-29
-
-
Sheng, M.1
Sala, C.2
-
33
-
-
0037195339
-
Involvement of the HtrA family of proteases in the protection of the cyanobacterium Synechocystis PCC 6803 from light stress and in the repair of photosystem II
-
Silva P, Choi YJ, Hassan HA, Nixon PJ (2002) Involvement of the HtrA family of proteases in the protection of the cyanobacterium Synechocystis PCC 6803 from light stress and in the repair of photosystem II. Philos Trans R Soc London B: Biol Sci 357: 1461-1487
-
(2002)
Philos Trans R Soc London B: Biol Sci
, vol.357
, pp. 1461-1487
-
-
Silva, P.1
Choi, Y.J.2
Hassan, H.A.3
Nixon, P.J.4
-
34
-
-
0141787934
-
FtsH is involved in the early stages of repair of photosystem II in Synechocystis sp. PCC6803
-
Silva P, Thompson E, Bailey S, Kruse O, Mullineaux CW, Robinson C, Mann NH, Nixon PJ (2003) FtsH is involved in the early stages of repair of photosystem II in Synechocystis sp. PCC6803. Plant Cell 15: 2152-2164
-
(2003)
Plant Cell
, vol.15
, pp. 2152-2164
-
-
Silva, P.1
Thompson, E.2
Bailey, S.3
Kruse, O.4
Mullineaux, C.W.5
Robinson, C.6
Mann, N.H.7
Nixon, P.J.8
-
35
-
-
3543046184
-
Expression in multi-gene families: Analysis of chloroplast and mitochondrial proteases
-
Sinvany-Villalobo G, Davydov GBA, Ben-Ari G, Zaltsman A, Raskind A, Adam. Z (2004) Expression in multi-gene families: analysis of chloroplast and mitochondrial proteases. Plant Physiol 135: 1336-1345
-
(2004)
Plant Physiol
, vol.135
, pp. 1336-1345
-
-
Sinvany-Villalobo, G.1
Gba, D.2
Ben-Ari, G.3
Zaltsman, A.4
Raskind, A.5
Adam, Z.6
-
36
-
-
0026642331
-
Occurrence of a photosystem II polypeptide in non-photosynthetic membranes of cyanobacteria
-
Smith D, Bendall DS, Howe CJ (1992) Occurrence of a photosystem II polypeptide in non-photosynthetic membranes of cyanobacteria. Mol Microbiol 6: 1821-1827
-
(1992)
Mol Microbiol
, vol.6
, pp. 1821-1827
-
-
Smith, D.1
Bendall, D.S.2
Howe, C.J.3
-
37
-
-
0036935397
-
The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC6803 and Arabidopsis thaliana chloroplasts
-
Sokolenko A, Pojidaeva E, Zinchenko V, Panichkin V, Glaser VM, Herrmann RG, Shestakov SV (2002) The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC6803 and Arabidopsis thaliana chloroplasts. Curr Genet 41: 291-310
-
(2002)
Curr Genet
, vol.41
, pp. 291-310
-
-
Sokolenko, A.1
Pojidaeva, E.2
Zinchenko, V.3
Panichkin, V.4
Glaser, V.M.5
Herrmann, R.G.6
Shestakov, S.V.7
-
38
-
-
0033617146
-
A temperature-dependent switch from chaperone to protease in a widely conserved heat shock protein
-
Spiess C, Beil A, Ehrmann M (1999) A temperature-dependent switch from chaperone to protease in a widely conserved heat shock protein. Cell 97: 339-347
-
(1999)
Cell
, vol.97
, pp. 339-347
-
-
Spiess, C.1
Beil, A.2
Ehrmann, M.3
-
39
-
-
0344953579
-
OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain
-
Walsh NP, Alba BM, Bose B, Gross CA, Sauer RT (2003) OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain. Cell 113: 61-71
-
(2003)
Cell
, vol.113
, pp. 61-71
-
-
Walsh, N.P.1
Alba, B.M.2
Bose, B.3
Gross, C.A.4
Sauer, R.T.5
-
40
-
-
0033520987
-
Posttranslational quality control: Folding, refolding, and degrading proteins
-
Wickner S, Maurizi MR, Gottesman S (1999) Posttranslational quality control: folding, refolding, and degrading proteins. Science 286: 1888-1893
-
(1999)
Science
, vol.286
, pp. 1888-1893
-
-
Wickner, S.1
Maurizi, M.R.2
Gottesman, S.3
-
41
-
-
2342659637
-
Crystal structure of the DegS stress sensor: How a PDZ domain recognizes misfolded protein and activates a protease
-
Wilken C, Kitzing K, Kurzbauer R, Ehrmann M, Clausen T (2004) Crystal structure of the DegS stress sensor: how a PDZ domain recognizes misfolded protein and activates a protease. Cell 117: 483-494
-
(2004)
Cell
, vol.117
, pp. 483-494
-
-
Wilken, C.1
Kitzing, K.2
Kurzbauer, R.3
Ehrmann, M.4
Clausen, T.5
-
42
-
-
0035083795
-
Quality control of photosystem II
-
Yamamoto Y (2001) Quality control of photosystem II. Plant Cell Physiol 42: 121-128
-
(2001)
Plant Cell Physiol
, vol.42
, pp. 121-128
-
-
Yamamoto, Y.1
-
43
-
-
0035818524
-
The initial steps of biogenesis of cyanobacterial photosystems occur in plasma membranes
-
Zak E, Norling B, Maitra R, Huang F, Andersson B, Pakrasi HB (2001) The initial steps of biogenesis of cyanobacterial photosystems occur in plasma membranes. Proc Natl Acad Sci USA 98: 13 443-13 448
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13443-13448
-
-
Zak, E.1
Norling, B.2
Maitra, R.3
Huang, F.4
Andersson, B.5
Pakrasi, H.B.6
-
44
-
-
3042644567
-
Structural analysis of DegS, a stress sensor of the bacterial periplasm
-
Zeth K (2004) Structural analysis of DegS, a stress sensor of the bacterial periplasm. FEBS Lett 569: 351-358
-
(2004)
FEBS Lett
, vol.569
, pp. 351-358
-
-
Zeth, K.1
-
45
-
-
0035825682
-
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 Å resolution
-
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P (2001) Crystal structure of photosystem II from Synechococcus elongatus at 3.8 Å resolution. Nature 409: 739-743
-
(2001)
Nature
, vol.409
, pp. 739-743
-
-
Zouni, A.1
Witt, H.T.2
Kern, J.3
Fromme, P.4
Krauss, N.5
Saenger, W.6
Orth, P.7
|