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Volumn 8, Issue 1, 1998, Pages 69-80

High-precision genotyping by denaturing capillary electrophoresis

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT;

EID: 17144449863     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.8.1.69     Document Type: Article
Times cited : (116)

References (48)
  • 1
    • 0031911874 scopus 로고    scopus 로고
    • Detection of p53 point mutations by single strand conformation polymorphism (SSCP): Analysis by capillary electrophoresis
    • in press
    • Atha, D.H., H.-M. Wenz, H. Morehead, J. Tian, and C. O'Connell. 1998. Detection of p53 point mutations by single strand conformation polymorphism (SSCP): Analysis by capillary electrophoresis. Electrophoresis (in press).
    • (1998) Electrophoresis
    • Atha, D.H.1    Wenz, H.-M.2    Morehead, H.3    Tian, J.4    O'Connell, C.5
  • 2
    • 0026518648 scopus 로고
    • Survey of human and rat microsatellites
    • Beckman, J.S. and J.L Weber. 1992. Survey of human and rat microsatellites. Genomics 12: 627-631.
    • (1992) Genomics , vol.12 , pp. 627-631
    • Beckman, J.S.1    Weber, J.L.2
  • 3
    • 0026276739 scopus 로고
    • Capillary electrophoresis of DNA in agarose solutions at 40 degrees C
    • Bocek, P. and A. Chrambach. 1991. Capillary electrophoresis of DNA in agarose solutions at 40 degrees C. Electrophoresis 12: 1059-1061.
    • (1991) Electrophoresis , vol.12 , pp. 1059-1061
    • Bocek, P.1    Chrambach, A.2
  • 4
    • 0001506104 scopus 로고    scopus 로고
    • Modulation of non-templated nucleotide addition by Taq DNA polymerase: Primer modifications that facilitate genotyping
    • Brownstein, M.J., J.D. Carpten, and J.R. Smith. 1996. Modulation of non-templated nucleotide addition by Taq DNA polymerase: Primer modifications that facilitate genotyping. Biotechniques 20: 1004-1006.
    • (1996) Biotechniques , vol.20 , pp. 1004-1006
    • Brownstein, M.J.1    Carpten, J.D.2    Smith, J.R.3
  • 5
    • 0029015231 scopus 로고
    • Application of dual internal standards for precise sizing of polymerase chain reaction products using capillary electrophoresis
    • Butler, J.M., B.R. McCord, J.M. Jung, J.A. Lee, B. Budowle, and R.O. Allen. 1995. Application of dual internal standards for precise sizing of polymerase chain reaction products using capillary electrophoresis. Electrophoresis 16: 974-980.
    • (1995) Electrophoresis , vol.16 , pp. 974-980
    • Butler, J.M.1    McCord, B.R.2    Jung, J.M.3    Lee, J.A.4    Budowle, B.5    Allen, R.O.6
  • 6
    • 0004511295 scopus 로고
    • Counter-migration capillary electrophoresis (CMCE) in DNA restriction fragment analysis
    • Chin, A.M. and J.C. Colburn. 1989 Counter-migration capillary electrophoresis (CMCE) in DNA restriction fragment analysis. Am. Biotech Lab. 7: 16-18.
    • (1989) Am. Biotech Lab. , vol.7 , pp. 16-18
    • Chin, A.M.1    Colburn, J.C.2
  • 7
    • 0001180921 scopus 로고
    • Rapid separation and purification of oligonucleotides by high-performance capillary electrophoresis
    • Cohen, A.S., D.R. Najarian, A. Paulus, A. Guttmann, A.J. Smith, and B.L. Karger. 1988. Rapid separation and purification of oligonucleotides by high-performance capillary electrophoresis. Proc. Natl. Acad. Sci. 85: 9660-9663.
    • (1988) Proc. Natl. Acad. Sci. , vol.85 , pp. 9660-9663
    • Cohen, A.S.1    Najarian, D.R.2    Paulus, A.3    Guttmann, A.4    Smith, A.J.5    Karger, B.L.6
  • 12
    • 0025939939 scopus 로고
    • DNA typing and genetic mapping with trimeric and tetrameric tandem repeats
    • Edwards, A., A. Civitello, H.A. Hammond, and C.T. Caskey. 1991a. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am. J. Hum. Genet. 49: 746-756.
    • (1991) Am. J. Hum. Genet. , vol.49 , pp. 746-756
    • Edwards, A.1    Civitello, A.2    Hammond, H.A.3    Caskey, C.T.4
  • 13
    • 0026551039 scopus 로고
    • Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups
    • Edwards, A., H.A. Hammond, L. Jin, C.T. Caskey, and R. Chakraborty. 1991b. Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups. Genomics 12: 241-253.
    • (1991) Genomics , vol.12 , pp. 241-253
    • Edwards, A.1    Hammond, H.A.2    Jin, L.3    Caskey, C.T.4    Chakraborty, R.5
  • 14
    • 0027318997 scopus 로고
    • DNA typing with fluorescently tagged short tandem repeats: A sensitive and accurate approach to human identification
    • Fregau C.J. and R.M. Fourney. 1993. DNA typing with fluorescently tagged short tandem repeats: A sensitive and accurate approach to human identification. BioTechniques 15: 100-119.
    • (1993) BioTechniques , vol.15 , pp. 100-119
    • Fregau, C.J.1    Fourney, R.M.2
  • 15
    • 0029926233 scopus 로고    scopus 로고
    • Homoplasy for size at microsatellite loci in humans and chimpanzees
    • Garza, J.C. and N.B Freimer. 1996. Homoplasy for size at microsatellite loci in humans and chimpanzees. Genome Res. 6: 211-217.
    • (1996) Genome Res. , vol.6 , pp. 211-217
    • Garza, J.C.1    Freimer, N.B.2
  • 17
    • 0027487271 scopus 로고
    • Optimization of the single-strand conformation polymorphism (SSCP) technique for detection of point mutations
    • Glavac, D. and M. Dean. 1993. Optimization of the single-strand conformation polymorphism (SSCP) technique for detection of point mutations. Hum. Mutat. 2: 404-414.
    • (1993) Hum. Mutat. , vol.2 , pp. 404-414
    • Glavac, D.1    Dean, M.2
  • 18
    • 0003987448 scopus 로고
    • (ed. P.D. Grossman, and J.C. Colburn), Academic Press, San Diego, CA
    • Grossman, P.D. 1992. In Capillary electrophoresis: Theory and practice (ed. P.D. Grossman, and J.C. Colburn), pp. 215-233. Academic Press, San Diego, CA.
    • (1992) Capillary Electrophoresis: Theory and Practice , pp. 215-233
    • Grossman, P.D.1
  • 19
    • 0026521157 scopus 로고
    • A genetic linkage map of human chromosome 20 composed entirely of microsatellite markers
    • Hazan, J., C. Dubay, M.P. Pankowiak, N. Bekuwe, and J. Weissenbach. 1992. A genetic linkage map of human chromosome 20 composed entirely of microsatellite markers. Genomics 12: 183-189.
    • (1992) Genomics , vol.12 , pp. 183-189
    • Hazan, J.1    Dubay, C.2    Pankowiak, M.P.3    Bekuwe, N.4    Weissenbach, J.5
  • 20
    • 0026780282 scopus 로고
    • Microsatellites for linkage analysis of genetic traits
    • Hearne, C.M., S. Ghosh, and J.A. Todd. 1992. Microsatellites for linkage analysis of genetic traits. Trends Genet. 8: 288-294.
    • (1992) Trends Genet. , vol.8 , pp. 288-294
    • Hearne, C.M.1    Ghosh, S.2    Todd, J.A.3
  • 21
    • 0025079053 scopus 로고
    • Separation of DNA restriction fragments by high performance capillary electrophoresis with low and zero crosslinked polyacrylamide using continuous and pulsed electric fields
    • Heiger, D.N., A.S. Cohen, and B.L. Karger. 1990. Separation of DNA restriction fragments by high performance capillary electrophoresis with low and zero crosslinked polyacrylamide using continuous and pulsed electric fields. J. Chromatogr. 516: 33-48.
    • (1990) J. Chromatogr. , vol.516 , pp. 33-48
    • Heiger, D.N.1    Cohen, A.S.2    Karger, B.L.3
  • 22
    • 0031263204 scopus 로고    scopus 로고
    • A stream-lined mutation detection system: Multicolor post-PCR fluorescence-labeling and SSCP analysis by capillary electrophoresis
    • Inazuka, M., H.-M. Wenz, M. Sakabe, T. Tahira, and K. Hayashi. 1997. A stream-lined mutation detection system: Multicolor post-PCR fluorescence-labeling and SSCP analysis by capillary electrophoresis. Genome Res. 7: 1094-1103.
    • (1997) Genome Res. , vol.7 , pp. 1094-1103
    • Inazuka, M.1    Wenz, H.-M.2    Sakabe, M.3    Tahira, T.4    Hayashi, K.5
  • 23
    • 0019589571 scopus 로고
    • Zone electrophoresis in open tubular glass capillaries
    • Jorgenson, J.W. and K.D. Lukacs. 1981. Zone electrophoresis in open tubular glass capillaries. Anal. Chem. 53: 1298-1302.
    • (1981) Anal. Chem. , vol.53 , pp. 1298-1302
    • Jorgenson, J.W.1    Lukacs, K.D.2
  • 24
    • 0029055843 scopus 로고
    • Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis
    • Ju, J.Y., C. Ruan, C.W. Fuller, A.N. Glazer, and R.A. Mathies. 1995. Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis. Proc. Natl. Acad. Sci. 92: 4347-4351.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 4347-4351
    • Ju, J.Y.1    Ruan, C.2    Fuller, C.W.3    Glazer, A.N.4    Mathies, R.A.5
  • 27
    • 0027251680 scopus 로고
    • Contribution of secondary structure to DNA mobility in capillary gels
    • Konrad, K.D and S.L. Pentoney, Jr. 1993. Contribution of secondary structure to DNA mobility in capillary gels. Electrophoresis 14: 502-508.
    • (1993) Electrophoresis , vol.14 , pp. 502-508
    • Konrad, K.D.1    Pentoney Jr., S.L.2
  • 28
    • 0027463606 scopus 로고
    • Capillary Electrophoresis: A powerful microanalytical technique for biologically active molecules
    • Landers, P.J., R.P. Oda, T.C. Speisberg, J.A. Nolan, and K.J. Ulfelder 1993. Capillary Electrophoresis: A powerful microanalytical technique for biologically active molecules. BioTechniques 14: 98-111.
    • (1993) BioTechniques , vol.14 , pp. 98-111
    • Landers, P.J.1    Oda, R.P.2    Speisberg, T.C.3    Nolan, J.A.4    Ulfelder, K.J.5
  • 29
    • 0029845635 scopus 로고    scopus 로고
    • Sensitivity, reproducibility, and accuracy in short tandem repeat genotyping using capillary array electrophoresis
    • Mansfield, E.S., M. Vainer, S. Enad, D.I. Barker, D. Harris, E. Rappaport, and P. Fortina. 1996. Sensitivity, reproducibility, and accuracy in short tandem repeat genotyping using capillary array electrophoresis. Genome Res. 6: 893-903.
    • (1996) Genome Res. , vol.6 , pp. 893-903
    • Mansfield, E.S.1    Vainer, M.2    Enad, S.3    Barker, D.I.4    Harris, D.5    Rappaport, E.6    Fortina, P.7
  • 31
    • 0024595101 scopus 로고
    • Detection of polymorphisms of DNA by gel electrophoresis as single-strand conformation polymorphism (SSCP)
    • Orita, M., H. Iwahara, K. Hayashi, and T. Sekiya. 1989. Detection of polymorphisms of DNA by gel electrophoresis as single-strand conformation polymorphism (SSCP) Proc. Natl. Acad. Sci. 86: 2766-2770.
    • (1989) Proc. Natl. Acad. Sci. , vol.86 , pp. 2766-2770
    • Orita, M.1    Iwahara, H.2    Hayashi, K.3    Sekiya, T.4
  • 32
    • 0028923282 scopus 로고
    • Analysis of the CD3 gene region and type 1 diabetes: Application of fluorescence-based technology to linkage disequilibrium mapping
    • Pritchard, L.E., Y. Kawaguchi, P.W. Reed, J.B. Copeman, J.L. Davies, A.H. Barnett, S.C. Bain, and J.A. Todd. 1995. Analysis of the CD3 gene region and type 1 diabetes: Application of fluorescence-based technology to linkage disequilibrium mapping. Hum. Mol. Genet. 4: 197-202.
    • (1995) Hum. Mol. Genet. , vol.4 , pp. 197-202
    • Pritchard, L.E.1    Kawaguchi, Y.2    Reed, P.W.3    Copeman, J.B.4    Davies, J.L.5    Barnett, A.H.6    Bain, S.C.7    Todd, J.A.8
  • 33
    • 0028858630 scopus 로고
    • Forensic applications of a rapid , sensitive and precise multiplex analysis of the four short tandem repeat loci HUMVWF31/A, HUMTHO1, HUMF13A1, and HUMFES/FPS
    • Robertson, J.M., J.B. Sgueglia, C.A. Badger, A.C. Juston, and J. Ballantyne. 1995. Forensic applications of a rapid , sensitive and precise multiplex analysis of the four short tandem repeat loci HUMVWF31/A, HUMTHO1, HUMF13A1, AND HUMFES/FPS. Electrophoresis 16: 1568-1576.
    • (1995) Electrophoresis , vol.16 , pp. 1568-1576
    • Robertson, J.M.1    Sgueglia, J.B.2    Badger, C.A.3    Juston, A.C.4    Ballantyne, J.5
  • 34
    • 0028485754 scopus 로고
    • Mapping quantitative trait loci with DNA microsatellites in a commercial dairy cattle population
    • Ron M., M. Band, A. Yanai, and J.I. Weller. 1994. Mapping quantitative trait loci with DNA microsatellites in a commercial dairy cattle population. Anim. Genet. 25: 259-264.
    • (1994) Anim. Genet. , vol.25 , pp. 259-264
    • Ron, M.1    Band, M.2    Yanai, A.3    Weller, J.I.4
  • 35
    • 0030924047 scopus 로고    scopus 로고
    • Effect of denaturants on DNA sizing accuracy in capillary electrophoresis
    • in press
    • Rosenblum, B.B., F. Oaks, S. Menchen, and B. Johnson. 1997. Effect of denaturants on DNA sizing accuracy in capillary electrophoresis. Nucleic Acids Res. (in press).
    • (1997) Nucleic Acids Res.
    • Rosenblum, B.B.1    Oaks, F.2    Menchen, S.3    Johnson, B.4
  • 38
    • 0000592001 scopus 로고
    • Electrophoresis of DNA in agarose and polyacrylamide gels
    • (ed. A. Chrambach, M.J. Dunn, and B.J. Radola), VCH Publishers, New York, NY
    • Stellwagen, N.C. 1987. Electrophoresis of DNA in agarose and polyacrylamide gels. In Advances in electrophoresis, Vol. 1 (ed. A. Chrambach, M.J. Dunn, and B.J. Radola), pp. 179-228. VCH Publishers, New York, NY.
    • (1987) Advances in Electrophoresis , vol.1 , pp. 179-228
    • Stellwagen, N.C.1
  • 39
    • 0026289274 scopus 로고
    • Pressure refilled polyacrylamide columns for the separation of oligonucleotides by capillary electrophoresis
    • Sudor, J., F. Foret, and P. Bocek. 1991. Pressure refilled polyacrylamide columns for the separation of oligonucleotides by capillary electrophoresis. Electrophoresis 12: 1056-1058.
    • (1991) Electrophoresis , vol.12 , pp. 1056-1058
    • Sudor, J.1    Foret, F.2    Bocek, P.3
  • 40
    • 0027999190 scopus 로고
    • Variation in short tandem repeat sequences-a survey of twelve microsatellite loci for use as forensic identification markers
    • Urquhart, A., C.P. Kimpton, T.J. Downes, and P. Gill. 1994. Variation in short tandem repeat sequences-a survey of twelve microsatellite loci for use as forensic identification markers. Int. J. Leg. Med. 107: 13-20.
    • (1994) Int. J. Leg. Med. , vol.107 , pp. 13-20
    • Urquhart, A.1    Kimpton, C.P.2    Downes, T.J.3    Gill, P.4
  • 41
    • 0029278559 scopus 로고
    • Rapid sizing of short tandem repeat alleles using capillary array electrophoresis and energy-transfer fluorescent primers
    • Wang, Y., J. Ju, B.A. Carpenter, J.M. Atherton, G.F. Sensabaugh, and R.A. Mathies. 1995. Rapid sizing of short tandem repeat alleles using capillary array electrophoresis and energy-transfer fluorescent primers. Anal. Chem. 67: 1197-1203.
    • (1995) Anal. Chem. , vol.67 , pp. 1197-1203
    • Wang, Y.1    Ju, J.2    Carpenter, B.A.3    Atherton, J.M.4    Sensabaugh, G.F.5    Mathies, R.A.6
  • 42
    • 0029805455 scopus 로고    scopus 로고
    • High-resolution capillary array electrophoretic sizing of multiplexed short tandem repeat loci using energy-transfer fluorescent primers
    • Wang, Y., J.M. Wallin, J. Ju, G.F. Sensabaugh, and R.A. Mathies. 1996. High-resolution capillary array electrophoretic sizing of multiplexed short tandem repeat loci using energy-transfer fluorescent primers. Electrophoresis 17: 1485-1490.
    • (1996) Electrophoresis , vol.17 , pp. 1485-1490
    • Wang, Y.1    Wallin, J.M.2    Ju, J.3    Sensabaugh, G.F.4    Mathies, R.A.5
  • 43
    • 0025157834 scopus 로고
    • Informativeness of human (dC-dA)n. (dG-dT)n polymorphisms
    • Weber, J.L. 1990. Informativeness of human (dC-dA)n. (dG-dT)n polymorphisms. Genomics 7: 524-530.
    • (1990) Genomics , vol.7 , pp. 524-530
    • Weber, J.L.1
  • 45
    • 0028029180 scopus 로고
    • Capillary electrophoresis as a technique to analyze sequence-induced anomalously migrating DNA fragments
    • Wenz, M.H. 1994. Capillary electrophoresis as a technique to analyze sequence-induced anomalously migrating DNA fragments. Nucleic Acids Res. 22: 315-320.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 315-320
    • Wenz, M.H.1
  • 46
    • 0027987777 scopus 로고
    • Analysis of DNA restriction fragment and polymerase chain reaction products by capillary electrophoresis
    • Williams, P.E., M.A. Marino, S.A. Del Rio, L.A. Turni, and J.M. Devaney. 1994. Analysis of DNA restriction fragment and polymerase chain reaction products by capillary electrophoresis. Chromatography 680: 525-540.
    • (1994) Chromatography , vol.680 , pp. 525-540
    • Williams, P.E.1    Marino, M.A.2    Del Rio, S.A.3    Turni, L.A.4    Devaney, J.M.5
  • 47
    • 0001077884 scopus 로고
    • Factors effecting free zone electrophoresis and isoelectric-focusing in capillary electrophoresis
    • Zhu, M.D, D.L. Hansen, S. Burd, and F. Cannon. 1989. Factors effecting free zone electrophoresis and isoelectric-focusing in capillary electrophoresis. J. Chromatogr. 480: 311-319.
    • (1989) J. Chromatogr. , vol.480 , pp. 311-319
    • Zhu, M.D.1    Hansen, D.L.2    Burd, S.3    Cannon, F.4


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